| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,444,739 | G→A | 13.5% | P290S (CCC→TCC) | tynA ← | tyramine oxidase, copper‑requiring |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,444,739 | 0 | G | A | 13.5% | 731.6 / 83.3 | 245 | P290S (CCC→TCC) | tynA | tyramine oxidase, copper‑requiring |
| Reads supporting (aligned to +/- strand): ref base G (95/116); new base A (17/16); total (112/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 251 total aligned reads displayed.
AATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGTTTCT > CP009273/1444590‑1444888 | aaTGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATggg < 2:1041726/150‑1 (MQ=255) aTGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGa < 2:970603/150‑1 (MQ=255) tGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGAt > 2:442702/1‑150 (MQ=255) aTTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTACTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGAtgt < 1:675664/150‑1 (MQ=255) aTTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCAATCAATTGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGAtgt < 1:2846964/150‑1 (MQ=255) tAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagt < 2:3118164/150‑1 (MQ=255) tAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCagt > 2:2556968/1‑150 (MQ=255) tAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCagt > 1:3712984/1‑150 (MQ=255) tAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTGTCGATGGAATGTGCCCcgt > 2:1299438/1‑150 (MQ=255) aGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGACTGTGCCCagta > 2:2338698/1‑150 (MQ=255) ggattAACTGCCGGAGAAACGCTGACACGGCCATCAAATGGGCGTGCGGTCATTTGCACCGGAACTACCGGACCTTCTTCAATCTTAAAGATTTTTTTCTGTT‑CTAAAACAACGAACGCCACCAGGTTTTCGATGGGATGTGACCagtag > 2:1415326/4‑150 (MQ=255) ggCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCagtag < 1:699825/150‑1 (MQ=255) ttAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGTAACTACCGGACCTTCTAAAATCTTAACTATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTg < 1:1959548/150‑1 (MQ=255) aaCTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGcc > 1:1884579/1‑150 (MQ=255) gCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCa < 1:1804952/150‑1 (MQ=255) gCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCa > 2:3370848/1‑150 (MQ=255) gCCGGAGCAACGCGGTCACGGCCAACAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTAAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCa < 1:3740684/150‑1 (MQ=255) ccGGAGCAACGCGGTCACGGCCATCATTTGGTCGTGGGGTAATTGTCACGGTAACTACGGGTCCTTTTTCAATCTTAAGTATTTTTTTATTTT‑CTATATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCAc < 1:2493080/150‑1 (MQ=255) ccGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCAc < 2:2296257/150‑1 (MQ=255) cGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATGGGCACCGGAACTACCGGACCTTATTCAATCTTACCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCAcc < 2:1814198/150‑1 (MQ=255) gAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGa > 2:3905488/1‑150 (MQ=255) cAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACAt < 2:1158845/150‑1 (MQ=255) gcgGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAg < 2:551446/150‑1 (MQ=255) cgGTCACGGCCATCAAATGGGCATGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGa < 2:346418/150‑1 (MQ=255) gttCACGGACATAACATGGGGGTGGTGTCTTTGGCACGTTAACTACCGTACTTTCTTAAATATTAAC‑TTTTTTTTTTGTTAATAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGAt < 1:19213/148‑1 (MQ=255) aCGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCt > 1:1949033/1‑150 (MQ=255) gCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCtgat > 1:1906226/1‑150 (MQ=255) cATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCtgatga < 2:4310821/150‑1 (MQ=255) tCAATTGGGCGTGCGGTATTTGGCACCGGAACTACCGGACCTTCTTAAATCTTAACTATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACt < 1:2595188/150‑1 (MQ=255) cAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACtt > 1:4189438/1‑150 (MQ=255) cAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACtt > 1:98547/1‑150 (MQ=255) aaaTGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACttt < 2:276977/150‑1 (MQ=255) aaaTGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACttt < 1:2431126/150‑1 (MQ=255) aaaTGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACttt > 1:2749832/1‑150 (MQ=255) aaTGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTg > 1:2396020/1‑150 (MQ=255) tGGGCGTGGGGTATTTGGCACCGTAACTACCGTACCTTCTTAATTATTAACTATTTTTTTGTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAg < 1:3230658/150‑1 (MQ=255) ggggCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATATTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAg < 1:2667792/149‑1 (MQ=255) ggCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCa < 1:3105159/150‑1 (MQ=255) tGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCg < 2:3019771/150‑1 (MQ=255) cGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCggg > 2:1119355/1‑150 (MQ=255) cATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATc > 1:4069943/1‑150 (MQ=255) aTTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCt > 1:4228547/1‑150 (MQ=255) gggCACCGGAACTACCGGACCTTCTTCAATCTTACCTTTTTTTTTCTGTT‑ATAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTg < 1:1479758/149‑1 (MQ=255) cACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCACGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCAGATGACATTGAGCAACCGGGCCTCTTGttt > 1:432615/1‑150 (MQ=255) cGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAg < 2:3644906/150‑1 (MQ=255) ggAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCTgg > 2:3710411/1‑150 (MQ=255) cTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCAt < 2:3959516/150‑1 (MQ=255) tACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATc < 1:1782289/150‑1 (MQ=255) tACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATc > 1:3263941/1‑150 (MQ=255) ccGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAACCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCtt < 1:3772702/150‑1 (MQ=255) cGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCttt < 2:4166742/150‑1 (MQ=255) ggACATTCTTAAATATTAACGATTTTTTTCTTTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTa < 1:1634764/150‑1 (MQ=255) aCCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTAcc > 1:1163723/1‑150 (MQ=255) aCCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCGTGTTTCAGGCCATCTTTAcc > 2:3201738/1‑150 (MQ=255) ccTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTGTCAGGCCATCTTTACCa > 2:4022872/1‑150 (MQ=255) tcttcAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCg > 2:1390519/1‑150 (MQ=255) cttcAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGa > 1:1365796/1‑150 (MQ=255) tcAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGaaa < 2:2489655/150‑1 (MQ=255) cAATCTTAACGATTTTTTTCTTTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAAt < 1:586219/150‑1 (MQ=255) cAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCACCCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAAt > 1:1303487/1‑150 (MQ=255) cAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAAt > 1:2323387/1‑150 (MQ=255) aaTCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATa < 1:442702/150‑1 (MQ=255) aaTCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATa > 1:425546/1‑150 (MQ=255) aaTCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATa > 2:1967587/1‑150 (MQ=255) cTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAAcc > 2:1880427/1‑150 (MQ=255) aaCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTAc > 1:3099718/1‑150 (MQ=255) aaCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTAc > 1:1015350/1‑150 (MQ=255) aaCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGACCAGTAGTTGACATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATaaaatac > 2:3430022/1‑145 (MQ=255) aCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACg > 1:2062124/1‑150 (MQ=255) aCGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACg > 1:511509/1‑150 (MQ=255) cGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACgg > 1:620884/1‑150 (MQ=255) tttttttCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCa < 2:2933200/150‑1 (MQ=255) ttttttCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAg < 2:16466/150‑1 (MQ=255) ttttCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcg > 1:1199850/1‑150 (MQ=255) ttCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcggc > 1:4038394/1‑150 (MQ=255) ttCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAgcggc > 1:3950121/1‑150 (MQ=255) cTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGt > 1:4226457/1‑150 (MQ=255) cTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGt < 1:149286/150‑1 (MQ=255) gTT‑CTAACTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTgg < 2:4183294/150‑1 (MQ=255) gTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTgg < 2:2093792/150‑1 (MQ=255) t‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGtc > 2:2847904/1‑149 (MQ=255) cTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCACCCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTaa > 1:1017959/1‑150 (MQ=255) aaTCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCa < 2:2456873/150‑1 (MQ=255) cAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtt > 1:2216439/1‑150 (MQ=255) aaCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACttt < 2:859722/150‑1 (MQ=255) aCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtttt < 2:632762/150‑1 (MQ=255) aCGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtttt < 1:388255/150‑1 (MQ=255) cGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACttttt < 1:388620/150‑1 (MQ=255) gACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACtttttt > 1:3499714/1‑150 (MQ=255) ccaccaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCAt > 2:1568231/1‑150 (MQ=255) ccaGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAg > 1:2245017/1‑150 (MQ=255) ggTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTaa < 2:874787/150‑1 (MQ=255) ggTTTTCGATGGAATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTaa < 2:3684279/150‑1 (MQ=255) gTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAAt < 1:3766032/150‑1 (MQ=255) gTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAAt < 1:3672096/150‑1 (MQ=255) ttttCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATa < 1:2187655/150‑1 (MQ=255) ttCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATAcc < 2:1274805/150‑1 (MQ=255) cGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACcgc > 1:3679356/1‑150 (MQ=255) aTGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGt > 1:80408/1‑150 (MQ=255) gggATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCACCCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGttt > 1:3538797/1‑150 (MQ=255) | AATGATTTGCATAGGCTTAACTGCCGGAGCAACGCGGTCACGGCCATCAAATGGGCGTGCGGTCATTGGCACCGGAACTACCGGACCTTCTTCAATCTTAACGATTTTTTTCTGTT‑CTAAATCAACGACCGCCACCAGGTTTTCGATGGGATGTGCCCAGTAGTTGCCATCACCGACATCAAGATAGCTGATGACTTTGAGCAACCGGGCATCTTGTTTCAGGCCATCTTTACCATCGAAATAACCTACGGTCAGCGGCGTGGTAATCACTTTTTTCGCATCAGTAATACCGCGTTTCT > CP009273/1444590‑1444888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |