Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,701,282 A→C 6.0% Q36P (CAG→CCG)  rsxC → SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,701,2820AC 6.0% 622.9 / 3.8 264Q36P (CAG→CCG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (126/109);  new base C (23/2);  total (149/115)
Fisher's exact test for biased strand distribution p-value = 1.67e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 266 total aligned reads displayed.

ATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCT  >  CP009273/1701134‑1701431
                                                                                                                                                    |                                                                                                                                                     
aTCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAg                                                                                                                                                      <  1:323328/150‑1 (MQ=255)
 tCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCgg                                                                                                                                                     >  1:2089501/1‑150 (MQ=255)
   tGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTa                                                                                                                                                   <  1:4343069/150‑1 (MQ=255)
    gAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAc                                                                                                                                                  >  1:1775391/1‑150 (MQ=255)
         ccATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTg                                                                                                                                             <  2:3450513/150‑1 (MQ=255)
             tCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATTAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTTCCCCTCgccc                                                                                                                                         >  1:1970721/1‑148 (MQ=255)
                       aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGt                                                                                                                               >  2:14054/1‑150 (MQ=255)
                       aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTgg                                                                                                                               >  2:12958/1‑149 (MQ=255)
                       aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGt                                                                                                                               >  2:2870636/1‑150 (MQ=255)
                       aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGt                                                                                                                               >  1:4262236/1‑150 (MQ=255)
                         cttgcccGTGTAAAACCATGCTTATTTTATGCTCTGAATTCATAAAAAATAAAATCTGGTATTTCACCGGCGGCATCCATCCACCGTAGATTAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTa                                                                                                                             <  1:1538612/146‑1 (MQ=255)
                         cATTCCCGTGTAACACCATGCTTAAGTTATTCTCTGAATTCATAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTa                                                                                                                             <  2:4082080/150‑1 (MQ=255)
                         cATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCAGCGTGTTGTTa                                                                                                                             >  1:4062662/1‑150 (MQ=255)
                         cATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGGTTTGTTa                                                                                                                             >  1:4048483/1‑150 (MQ=255)
                            tCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCTGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTc                                                                                                                          <  1:353375/150‑1 (MQ=255)
                             cccGTGGAACACCATGCGTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCGGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTcc                                                                                                                         <  2:2527877/150‑1 (MQ=255)
                               cGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCAc                                                                                                                       >  1:3699473/1‑150 (MQ=255)
                                gTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACt                                                                                                                      <  2:4266492/150‑1 (MQ=255)
                                gTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACt                                                                                                                      <  2:2738899/150‑1 (MQ=255)
                                  gtaaCACCATGCTTATGTTAGTCTCTGATTTAAGAAAAAATAAAATCGGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGa                                                                                                                    <  1:2903132/148‑1 (MQ=255)
                                      cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                                                                                <  1:1013589/150‑1 (MQ=255)
                                         cATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGTGTTGTTATTACACTGAAACAGCa                                                                                                             >  1:350540/1‑150 (MQ=255)
                                             cTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATAtt                                                                                                         >  2:605514/1‑150 (MQ=255)
                                             cTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCAACTGAAACAGCATAtt                                                                                                         >  1:579222/1‑150 (MQ=255)
                                             cTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGGTTTGTTATTACACTGAAACAGCATAtt                                                                                                         >  2:2990764/1‑150 (MQ=255)
                                                 aGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACAGAAACAGCATATTGgcg                                                                                                     >  1:2854305/1‑150 (MQ=255)
                                                    tATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTg                                                                                                  <  2:3202219/150‑1 (MQ=255)
                                                      ttCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGaa                                                                                                >  2:1788616/1‑150 (MQ=255)
                                                      ttCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGaa                                                                                                <  2:3965600/150‑1 (MQ=255)
                                                       tctcTGCATTCATAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAg                                                                                               <  1:2709010/150‑1 (MQ=255)
                                                       tctcTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGGGCCCCAGGCGCAGCGTTTTGTTATTCCACAGAAACAGCATATTGGCGCTGAAg                                                                                               >  1:1513900/1‑150 (MQ=255)
                                                       tctcTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAg                                                                                               >  2:1335840/1‑150 (MQ=255)
                                                         tctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGt                                                                                             >  1:694899/1‑150 (MQ=255)
                                                             cATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCACCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                                                                         >  2:909121/1‑150 (MQ=255)
                                                              aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGtt                                                                                        <  2:3553346/150‑1 (MQ=255)
                                                              aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCAGCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGtt                                                                                        <  2:3707791/150‑1 (MQ=255)
                                                               ttCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCACCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg                                                                                       <  1:2432271/150‑1 (MQ=255)
                                                                 cAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtgtg                                                                                     <  2:4189966/150‑1 (MQ=255)
                                                                   gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCCGTACCCCTGGCGCAGCGGTTTGTTATTCCACAGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg                                                                                   >  1:3878880/1‑150 (MQ=255)
                                                                   gAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAAAGCATATTGGCGCGGAAGGTGAGTTGTGCg                                                                                   >  2:46725/1‑150 (MQ=255)
                                                                     aaaaaTAAATTCTGGTTTTTCAACGGCGGAATCAATCCACCGGATATTAAAACCTAGTACAACGGTACACCCCTGCGCCAGGTACCCCTGGCGAAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGtt                                                                                 <  1:3183641/150‑1 (MQ=255)
                                                                      aaattaaaatCTTGTTTTTCAACGGCGGCAACCATCCACCGTAGTTGAAAACCCAGTCCAAGGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                                <  1:3000613/150‑1 (MQ=255)
                                                                      aaaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCCTATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                                >  2:3495734/1‑150 (MQ=255)
                                                                      aaaataaaatCTGGGATTTCAACGGCGGAATCCATCCACCGGATATTAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                                <  1:3387487/150‑1 (MQ=255)
                                                                      aaaataaaagCTGGGATTTCAACGGCGGCATCCATCCACCGTAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                                <  1:159764/150‑1 (MQ=255)
                                                                       aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAg                                                                               <  1:952428/150‑1 (MQ=255)
                                                                       aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCCGCGTTTTGTTATTCCACTGAAACCGCAAATTGGCGCGGAAGGTGAGTTGTGCGTTAg                                                                               >  2:2209875/1‑150 (MQ=255)
                                                                       aaataaaaaCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAg                                                                               <  1:952670/150‑1 (MQ=255)
                                                                         ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTACACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCg                                                                             >  1:3561001/1‑150 (MQ=255)
                                                                           aaactCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTc                                                                           <  1:2679398/150‑1 (MQ=255)
                                                                           aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATCTTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTc                                                                           >  1:3907981/1‑150 (MQ=255)
                                                                           aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTc                                                                           >  2:3134718/1‑150 (MQ=255)
                                                                             aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCAGGCGCCGCGTTTTGTTATTCCACTTAAACAGCCTATTGGCGCTGTAGGTGTGTTGTGCGTTAGCGTCgg                                                                         >  1:4179066/1‑150 (MQ=255)
                                                                              atCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGATTTGTGAGTTAGCGTCGGc                                                                        >  2:3249642/1‑150 (MQ=255)
                                                                                 tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGAt                                                                     <  2:1775391/150‑1 (MQ=255)
                                                                                     aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTACACAGTAACAGCATATGGGCGCTGGAGGTGAGTTGTGCGTTAGCGGCGGCGATAAAg                                                                 >  2:2188473/1‑150 (MQ=255)
                                                                                     aTTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCAGATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAg                                                                 >  2:1176784/1‑150 (MQ=255)
                                                                                        tCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTACACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTTGCGTCGGCGCTAAAGTAt                                                              >  1:3585835/1‑150 (MQ=255)
                                                                                        tCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTAt                                                              >  1:1433515/1‑150 (MQ=255)
                                                                                         cAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCACCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTAtt                                                             <  1:4023422/150‑1 (MQ=255)
                                                                                          aaCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTg                                                            <  1:2309734/150‑1 (MQ=255)
                                                                                          aaCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTGGCGCGGAAGGGGAGTTGTGCGGTAGCGTCGGCGATACAGTATTg                                                            >  2:73882/1‑150 (MQ=255)
                                                                                            cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGGGCCAGGTACCCCAGGCGCCGCGGGTTGTTATTCCACAGAAACAGCATAGTGGCGCGGCAGGTGGGGTGTGGGTTTGAGTCGGCGATAAAGGATTtcg                                                          >  1:1158615/1‑150 (MQ=255)
                                                                                            cggcggCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTCCACTGCAACAGCCTATTGGCGCGGCAGGTGAGTTGTGCGGTAGCGTCGGCGCTAAAGTATTgcg                                                          >  2:1877038/1‑150 (MQ=255)
                                                                                             ggcggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTACACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAACTATTgcgc                                                         >  1:2484722/1‑150 (MQ=255)
                                                                                              gcggcATCCATCCACCGGAGATGAACACCCCGTCCACCGGTACCCCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGcgcg                                                        <  2:1087/150‑1 (MQ=255)
                                                                                                ggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTCCACTGAAACAGCCTATTGGCGCTGAAGGTGAGGTGTGCGGTGGCGGCGGCGATAAAGTATTGCGCGGc                                                      >  2:2349834/1‑150 (MQ=255)
                                                                                                 gcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGGTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGcc                                                     >  2:167034/1‑150 (MQ=255)
                                                                                                 gcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCCTATGGGCGCTGAAGGGGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGcc                                                     >  2:894974/1‑150 (MQ=255)
                                                                                                  catccatcCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCa                                                    <  1:2098031/150‑1 (MQ=255)
                                                                                                    tccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAACCCGGGCGCAGCGGTTTGTTATTACACTGAAAAACAATATTGTCGCTGAAGGTTAGTTTTGCGTTATCGTCGGCGATAAATTAATGCGCGGCCAGc                                                  >  1:2073511/1‑150 (MQ=255)
                                                                                                       atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAACCCAGGCGCAGCGTTTTGTTATTACACAGAAACAGCCTATTGGCGCGGAAGGTGTGTTGTGCGTTAGCGTCGGCGATAAAGGATTGCGCGGCCAGCCGc                                               >  2:774843/1‑150 (MQ=255)
                                                                                                        tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCt                                              <  1:997212/150‑1 (MQ=255)
                                                                                                           aCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACAGAAACAGCAGAATGGCGCGGAAGGTGAGTTGTGCGGTAGCGTCGGCGCTAAAGTATTGCGCGGCCCGCCGCTTAc                                           >  2:1494231/1‑150 (MQ=255)
                                                                                                            ccGGAGATGAACACCCAGTCCAACGGTACACCCCTGCGCCAGGTCCCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTAcc                                          <  2:2047543/150‑1 (MQ=255)
                                                                                                             cGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTAccc                                         <  1:2586347/150‑1 (MQ=255)
                                                                                                                agaTTAAAACCCAGTCCACCGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTg                                      <  1:761753/150‑1 (MQ=255)
                                                                                                                 gaTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACAGAAACAGCATATTGGCGCTGAAGGTGAGTGGTGGGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGAgg                                     >  2:3401176/1‑150 (MQ=255)
                                                                                                                   tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTc                                   >  2:3849015/1‑150 (MQ=255)
                                                                                                                     aaaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGTAGGTGTGTTGTGCGGTTGCGTCGGCGATAAAGTATTTCGCGGCCAGCCGCGTACCCGTGGgcgc                                 >  1:361629/1‑150 (MQ=255)
                                                                                                                      aaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGGTTTGTTATTGCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGGGGTATCGGCGGCGATAAAGTATTGCGCGGCCACCCCCGTACCCCTGGGcgcg                                >  1:4308291/1‑150 (MQ=255)
                                                                                                                        aCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGc                              <  2:245350/150‑1 (MQ=255)
                                                                                                                                cAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgct                      <  2:1244951/150‑1 (MQ=255)
                                                                                                                                cAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgct                      <  2:822438/150‑1 (MQ=255)
                                                                                                                                 aaCGGTACACCCCTGCGCCAGGTACCCCAGGCGCACCGTTTTGTTATTACACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCCGCCGCATACCCGGGGTCGCGGCACAAttctg                     >  2:2289326/1‑150 (MQ=255)
                                                                                                                                       acacCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGtt               <  1:861314/150‑1 (MQ=255)
                                                                                                                                        cacCCCGGCGCCTGGTACCCCGGGGGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTc              <  1:2220853/150‑1 (MQ=255)
                                                                                                                                         acCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCa             <  1:3134763/150‑1 (MQ=255)
                                                                                                                                          ccccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAc            >  2:58758/1‑150 (MQ=255)
                                                                                                                                          ccccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAc            <  2:1579336/150‑1 (MQ=255)
                                                                                                                                           cccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAcg           <  2:181699/150‑1 (MQ=255)
                                                                                                                                             cggcgcCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCAcgcg         <  2:4308291/148‑1 (MQ=255)
                                                                                                                                               gcgcCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGcc       <  2:4110208/150‑1 (MQ=255)
                                                                                                                                               gcgcCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGcc       >  1:1067729/1‑150 (MQ=255)
                                                                                                                                                cgcCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGccc      >  1:2734992/1‑150 (MQ=255)
                                                                                                                                                  ccAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGGTAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCAGTTCACGCGCCCAc    >  1:3406095/1‑150 (MQ=255)
                                                                                                                                                  ccAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAc    <  1:2949511/150‑1 (MQ=255)
                                                                                                                                                   cAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAcc   >  2:2743598/1‑150 (MQ=255)
                                                                                                                                                    aGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCt  <  1:1705458/150‑1 (MQ=255)
                                                                                                                                                    aGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCt  <  1:1267173/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCT  >  CP009273/1701134‑1701431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑