| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,823,835 | A→C | 7.8% | W53G (TGG→GGG) | astD ← | succinylglutamic semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,823,835 | 0 | A | C | 7.8% | 643.2 / 3.3 | 280 | W53G (TGG→GGG) | astD | succinylglutamic semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (151/97); new base C (5/27); total (156/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
GATCATCGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTAATCCATA > CP009273/1823686‑1823984 | gATCATCGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCa > 2:3510776/1‑150 (MQ=255) catcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAgcg < 2:2518854/150‑1 (MQ=255) catcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAgcg > 1:109200/1‑150 (MQ=255) catcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAgcg > 2:2220924/1‑150 (MQ=255) atcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAgcgc > 2:379410/1‑150 (MQ=255) tcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGcgcg > 2:458230/1‑150 (MQ=255) cGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGaaa > 1:2510436/1‑150 (MQ=255) gTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAAc > 1:122900/1‑150 (MQ=255) gTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAc > 1:2130395/1‑150 (MQ=255) gTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAc > 1:185645/1‑150 (MQ=255) tCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcg > 1:3478281/1‑150 (MQ=255) tCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcg > 1:2498724/1‑150 (MQ=255) tCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcg < 2:349866/150‑1 (MQ=255) cACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCACTAATCGCGGTTAAGTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcgc > 2:3639812/1‑150 (MQ=255) aCTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcgcc > 1:1496660/1‑150 (MQ=255) cTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACAcgccg < 2:1758246/150‑1 (MQ=255) ttGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACggg > 1:96581/1‑150 (MQ=255) gCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCt > 2:1502889/1‑150 (MQ=255) gCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGcc > 2:3189470/1‑150 (MQ=255) cTTCCCCGCGCGGCTTACCCTTTTCTCTGGAAATATTCGCGGTTATTTCGTCTTTATTGCTTTCCAGCAGTGCGGAAAAGCGTT‑CGACAACGGCATGACGTTCAGAAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGccc < 2:1696729/150‑1 (MQ=255) cccAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCGTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCACATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGAc > 2:1528998/1‑150 (MQ=255) cAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACaa > 1:3640619/1‑150 (MQ=255) aGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAg > 2:1919395/1‑150 (MQ=255) aGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTACAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAATCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAg > 1:2995950/1‑150 (MQ=255) ttACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCg > 2:164691/1‑150 (MQ=255) cGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTg > 1:4268515/1‑150 (MQ=255) cGTTTCTCGGGAAATACGCGGGGTTTTTTGGGATTTTTGGCTTTCCCGCTGTGCGCCAAAGCGTT‑CGACACCGGCATGACGTTACGCAAAGCAAAGCCGGGCCCCGGGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTg < 2:4025827/150‑1 (MQ=255) ctctGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcgg > 2:497687/1‑150 (MQ=255) ctgtaaataatCGCGTATATTTCGGCTTTATTGCTTCCCAGCAGTGCGCAAACGCTTA‑CGACACCGGAATGACGTTCAGAAAATCAACGCCGCGCCCAGCGCGCAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggca < 1:2733917/145‑1 (MQ=255) tGGCAATAATCGCGGTTATTTGGGATTTATTGATTTCCCGCTGTGGGGAAACGCTTT‑CTACACCGGAATGACGTTCACAAAATTAACGCCGCGCCCAGCGCGCAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcat < 1:3581482/150‑1 (MQ=255) ggCAATAATCGGGTTTAATTGGGTTTTATTGCTTACCAGCAGTGCGGAAACGCGTT‑CGCCAACGGCATGAGGTTCAGAAAATGAAAGCCGCGCCCCGCGGGCACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcatc < 1:1986894/150‑1 (MQ=255) gCAATAATCGCGTTTAATTCGGATTTATTGCTTTCCAGCAGTGCGGCAAAGCTTT‑CGACACCGGCATGACTTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcatca < 2:3018280/150‑2 (MQ=255) gCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcatca < 2:3018512/150‑2 (MQ=255) cgGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgc > 1:4187831/1‑150 (MQ=255) gTTATTTCGGCTTAATTGCTTTCCAGCAGTGCGGAAACGCGTT‑CGACAACGCCATGACGGACAGCAAATCAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgcct < 1:3199187/150‑1 (MQ=255) aaTTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgccttgc > 2:2644184/1‑150 (MQ=255) tCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCAt > 2:3532598/1‑150 (MQ=255) tCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCAt > 2:3463675/1‑150 (MQ=255) gCTTTATTGCTTTCCAGCAGTGCGGAAAAGCGTT‑CGACAACGGAATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAac < 2:2302001/150‑1 (MQ=255) cTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAaca > 1:1814114/1‑150 (MQ=255) tttttGCTTTCCAGCTGTGCGGAAACGCGTC‑CCACACCGGATTGAGTTTAAGAAAAGCAAAGCCGCCCCCCGCGCGTAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACAcc < 1:491478/147‑1 (MQ=255) ttATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACAcc > 2:3683581/1‑150 (MQ=255) tATGGCTTTCCAGCTGTGCGGCAAAGCGTT‑CTACAACGGCATGACGTTCAGAAAATTAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCt < 2:1547831/150‑1 (MQ=255) tttGCTTTCCAGCTGTGCGGCAATGCGTT‑CGCCAACGGCTTGACGTTCAGCAATTGAACGCCGCGCCCCGCGGGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTc < 2:80317/149‑1 (MQ=255) tttGCTTCCCTGCGGGGC‑GCAAAGGGTTCCCACACCGGCTTGACTTTCACAAAATGAACGCCGCGCCCCGCGCGCACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTc < 1:4029103/149‑1 (MQ=255) aTTGCTTTCCAGCATTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCTCGGAAACGCCGCACGGGCTGACCGACAAGCCTGCTCGACCTGAGAGGCATCGGCATCAGTGCCTTGCCATAACACCTc > 1:3843505/1‑150 (MQ=255) aTTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTc > 1:3793412/1‑150 (MQ=255) tGCTTCCCCGCTGGGGGGCACCGCGTT‑CGACACCGGCATGACGTTCAGAAAATTAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGc < 1:1733120/150‑1 (MQ=255) gCTTTCCAGCTGGGCGGCAAAGCGTT‑CGACACCGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGcc < 2:2696925/150‑1 (MQ=255) agTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGa > 2:2092323/1‑150 (MQ=255) tGCGGAAAAGCTTT‑CGACAACGGATTTACGTTCAGAAAATTAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGAtt < 1:592092/150‑1 (MQ=255) cGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTAc > 2:2590646/1‑150 (MQ=255) cGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTAc > 2:568245/1‑150 (MQ=255) cGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTAc < 2:3607864/150‑1 (MQ=255) ggCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACg < 2:2812726/150‑1 (MQ=255) gCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGc > 1:1281422/1‑150 (MQ=255) gCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGc > 1:2260769/1‑150 (MQ=255) cAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCt > 1:81134/1‑150 (MQ=255) aatgCGTT‑CGACACCGGCATGACGTTCAGCAATTCAACGCCGCGCCCCGCGCGCACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCtt < 2:373668/147‑1 (MQ=255) aaaGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCtt > 1:933560/1‑150 (MQ=255) gggTT‑CGAAAACGGATTGACGTTCAGCAAATGAAAGCCGCGCCCAGGGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTcac < 1:2857971/148‑1 (MQ=255) gCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTcac > 1:3445156/1‑150 (MQ=255) gTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCacac < 2:203953/150‑1 (MQ=255) gTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCacac > 2:3129889/1‑150 (MQ=255) gTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCacac > 2:120784/1‑150 (MQ=255) cGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACAcgcg > 2:1967332/1‑150 (MQ=255) aaaaCGGCTTTACTTTCATAAAATTAACGCCGCGCCCCGGGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGAt < 1:1883800/148‑1 (MQ=255) accGGCATGACGTTCATCAAATGAAAGCCGCGCCCAGCGCTGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc < 2:3112940/148‑1 (MQ=255) aaCGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc < 2:329013/150‑1 (MQ=255) aaCGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc > 1:2716153/1‑150 (MQ=255) aaCGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc > 1:2963236/1‑150 (MQ=255) ccGGCATGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgcg < 2:935649/149‑1 (MQ=255) acggattGACGTTCAGAAAATTACAGCCGCGCCCCGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgcg < 2:750918/144‑1 (MQ=255) cATGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCt < 1:263250/150‑1 (MQ=255) cATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCt > 1:564426/1‑150 (MQ=255) tGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTgg > 2:3387647/1‑150 (MQ=255) gACGTTCAGCAACTGAAAGCCGCGCCCCGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGc < 1:2435919/150‑1 (MQ=255) cGTTCTGAAAATTAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGccc < 2:2970162/150‑1 (MQ=255) tcatcaAATCAACGCCGCCCCCCGCGCGCCCACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGtt < 1:3657785/150‑1 (MQ=255) tCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGtt < 2:1436216/150‑1 (MQ=255) cAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTa < 2:1389165/150‑1 (MQ=255) cAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTa > 2:1290478/1‑150 (MQ=255) cAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTa < 2:106211/150‑1 (MQ=255) gCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATc < 2:1155272/150‑1 (MQ=255) cAACTGAAAGCCGCGCCCCGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATcc < 1:1626933/150‑1 (MQ=255) cAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATcc < 1:3251560/150‑1 (MQ=255) aaTGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAg > 1:1374492/1‑150 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTc > 1:323237/1‑150 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTc > 1:2834154/1‑150 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTc > 1:662703/1‑150 (MQ=255) gAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCa < 2:3911016/150‑1 (MQ=255) aaGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCAcc > 2:1080322/1‑150 (MQ=255) aaGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCAcc < 2:669247/150‑1 (MQ=255) aGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 1:2445211/150‑1 (MQ=255) aGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:3342738/150‑1 (MQ=255) aGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:4198561/150‑1 (MQ=255) gCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGt > 2:2340215/1‑150 (MQ=255) ccGCGCCCCCCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGtt < 1:458230/150‑1 (MQ=255) ccGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGtt < 2:4326092/150‑1 (MQ=255) cccAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTAATcc < 2:2130395/150‑1 (MQ=255) | GATCATCGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCATGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTAATCCATA > CP009273/1823686‑1823984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |