Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 161,068 | A→C | 40.4% | intergenic (+47/‑149) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 161,068 | 0 | A | C | 40.4% | 12.2 / 33.7 | 59 | intergenic (+47/‑149) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
Reads supporting (aligned to +/- strand): ref base A (17/18); new base C (5/19); total (22/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.39e-02 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGA > CP009273/160920‑161208 | cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑t > 1:1558902/1‑150 (MQ=255) aaaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCAc > 1:2795065/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACg > 2:2084052/1‑150 (MQ=255) aaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCC‑TCCGCGCGCACggg > 1:2285063/1‑148 (MQ=255) aaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACggg > 2:4081560/1‑148 (MQ=255) aaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACggg > 2:4081539/1‑148 (MQ=255) aaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGtg > 1:2284862/1‑149 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGACAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCCGCGCGCACGtgg > 2:210472/1‑148 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCC‑TCAGCGCGCACGtgg > 1:2857884/1‑148 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCCGCGCGCACGtgg > 2:210474/1‑148 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACgggg > 1:1647549/1‑147 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑GCAGCGCGCTCgggg > 2:209706/1‑147 (MQ=255) agaTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCCAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCC‑TCAGCGCGCACGtggcc > 2:1463616/1‑146 (MQ=255) aTGAATGGGGGTTATCCAAAACTGGTGGGGCGGGCCGACCGGTAAAATTCTGCCCCGACGCGCGGGACTAAATTGTATTCGTATGGTTGGT‑TTTC‑TCCCTCTCCGTGGGGGTGTGGGCG‑GGGG‑TGTGGGCA‑TCAGCGCGCACGTtcaccc < 2:2129864/150‑1 (MQ=255) gAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTggacccac > 2:2099958/1‑148 (MQ=255) cGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTGGCCCCCCACCCCaa > 2:2459732/1‑150 (MQ=38) gTTATCCAAAACATGGCTGGCCGGCCGACCCGGCAAATACGGCACCGCCGCGACGGACTAAAACGTATTGTTAAGTTTGGT‑TTTC‑TCCATCTCCCTGGGGGTGTGGGCG‑GGGG‑TGTGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAAc < 2:2137810/150‑1 (MQ=255) aTCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTGGCCCCCCCCCCCAAccca > 2:2371686/1‑149 (MQ=38) cAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTGCGCCCCACCCAAAcccaccaa > 2:351530/1‑145 (MQ=38) ggCCGGACGCCCGGTAAAATCCGCCCCCGACGCGCCGGACTAAAAATTTTTCTAACGTTTGGT‑TTAC‑CCCCGCCCCCTGGGGGAGTGGGCC‑GGGG‑TGAGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 2:553776/150‑1 (MQ=255) ggCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTGGCCCCCCCCCCAAACCCACACCCACACgggcgc > 2:3149325/1‑147 (MQ=25) gCAATTCCTCCACCGACGCGACGGCCTAAAAATTAGTCTAAAGGTTGGT‑TGTC‑TCCCTCCCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGCTCGAg < 2:4257813/150‑1 (MQ=37) cAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTACGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCC‑TCCGCGCGCACGTGCCCCCACACCCCCACCCCCACCCACCAGGGCGGGGGGGCCGCTCGAGc > 2:3592846/1‑150 (MQ=25) aaaTCCTGCACCGCCGCGACGTCCTAAAAAGTATTCGTATGGTTGTT‑TTTC‑TCCCTCACCGGGGGGGCGTGGGCG‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGca < 2:3601537/150‑1 (MQ=255) cACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCC‑TCAGCGCGCACGTTCACCCGCACCCAAACCCACACCCACAACGGGGTGGGGAGCGATCCAGCACCACtttt > 2:1795138/1‑150 (MQ=25) cgccgcgacgGACTAAAATGTTTTC‑TTAGGTTGGTGTTTC‑CCCCTCGCGTGGGGGGTGGGGGCG‑GGGT‑TGGGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTgag < 2:2361041/147‑1 (MQ=255) gacggcctAAAAATTATCCGTAAGGTTGGT‑TTTC‑GCCCTCCCCGTGTGGTCGTGGGCC‑GGGG‑TGCGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGatat < 2:1971784/150‑1 (MQ=255) ctgactAAAAATTATTCGTAAGGTTGTT‑TTTC‑ACCCTTTCCCTGGGTTAGTGGGCG‑GGGG‑TGAGGACA‑TCAGCGCGCAAGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtct < 2:1960073/148‑1 (MQ=255) cggacgAAAATGATTTCCTATGGTTGGT‑TTTC‑TCCCTCGCCCGGTGGGAGCGGGCG‑GGGG‑TGAGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtct < 2:604445/150‑1 (MQ=255) acgAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTGACCCCCACCCCAAACCACACCCACCAAGGTGATGGGCCCCAAACAGCACAAAAATTGTGAGataaaataa > 2:690415/1‑144 (MQ=16) aaaaaGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACTCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct > 1:770710/1‑150 (MQ=255) atgttgggt‑tTTC‑CCCGTCTCCCTGGGGTTGTGGGCG‑GGGG‑TGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACaga < 1:1068065/144‑1 (MQ=255) gttggt‑tTTCGCCCCTCCCCGTGGGGTTGGGGGGG‑GGGG‑TGCGGCCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaag < 1:604589/150‑1 (MQ=255) ttC‑TCCCTCTCCCTGTGGTTGAGGGCC‑GGGG‑TGCGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGaaa < 2:2686207/150‑1 (MQ=255) ttC‑TCCCGCGCCCGGTGGGAGCGGGCC‑GGGG‑TGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGaaa < 2:2685280/150‑1 (MQ=255) ccgccctccccgtGTGGGAGTGGGCC‑GGGG‑TG‑GGGCACTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGaaaa < 2:1273128/147‑1 (MQ=255) caccctctccggGGGGGGGCGGCCG‑GGGG‑GGCGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGCGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAAt < 1:3149325/148‑1 (MQ=255) tccctctccgtGTGGGTGTGGGCG‑GGGG‑GGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATc < 2:2507236/150‑1 (MQ=255) ccctctcccgGTGGTAGAGGGCC‑GGGG‑TGCGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCg < 2:2107131/150‑1 (MQ=255) gcggggtgGGGGGGGGCG‑GGGG‑TGAGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCtt < 1:1714688/145‑1 (MQ=255) cccgggtgGGAGCGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGCTATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCtt < 1:2865111/145‑1 (MQ=255) ccctGTGGGAGCGGGCG‑GGGG‑TGAGGGCA‑TCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCttt < 2:3927272/150‑1 (MQ=255) ccctGGGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAGTTGGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCttt < 2:3927292/150‑1 (MQ=255) cggtgGGAGAGGGCC‑GGGG‑TGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTg < 2:1038151/148‑1 (MQ=255) gtgGGCGCGGCCC‑GGGG‑TGAGGCCC‑TCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCACAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcg < 1:1775855/150‑1 (MQ=255) gggggAGGGGCCC‑GGGG‑TGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcg < 2:456693/148‑1 (MQ=255) gggggtggggCC‑GGGGTTGCGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcg < 1:591704/143‑1 (MQ=255) gggggggggCG‑GGGG‑GGCGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGcc < 1:1704435/144‑1 (MQ=255) tgagGGCG‑GGGG‑TTGGGCCC‑TCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCATGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGa < 2:226171/149‑1 (MQ=255) tgagGGCG‑GGGG‑TGCGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGa < 2:1002452/149‑1 (MQ=255) tggggCCGGGGG‑GGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGa < 2:809876/148‑1 (MQ=255) tgggCC‑GGGG‑TGAGGGCA‑TCAGCGCGCCCGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAat < 2:2861789/149‑1 (MQ=255) ggCG‑GGGG‑TGTGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAatat < 1:3857066/150‑1 (MQ=255) c‑GGGG‑TGCGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 2:2790042/150‑1 (MQ=255) gggg‑ggCGGGCC‑TCAGCGCGCCCGTTCACCCTCACCCTAACCATCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:921936/150‑1 (MQ=255) gggg‑TGCGGCCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:922173/150‑1 (MQ=255) ggg‑TGTGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCgg < 2:3022790/150‑1 (MQ=255) gg‑TGAGGGCC‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 2:1364705/150‑1 (MQ=255) gg‑TGAGGCCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGAACGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 2:2486738/150‑1 (MQ=255) | CGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGT‑TTTC‑TCCCTCTCCCTGTGGGAGAGGGCC‑GGGG‑TGAGGGCA‑TCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGA > CP009273/160920‑161208 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |