| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,109,267 | A→T | 6.6% | I37I (ATT→ATA) | wcaM ← | colanic acid biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,109,267 | 0 | A | T | 6.6% | 671.6 / 4.3 | 241 | I37I (ATT→ATA) | wcaM | colanic acid biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base A (111/111); new base T (17/2); total (128/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.21e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 249 total aligned reads displayed.
CTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTT > CP009273/2109118‑2109416 | ttCCAAGAATGTGTAACGTTTTACCGGTAGTGATAAAGATGAAGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGATTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑Taa < 2:345794/150‑1 (MQ=255) ttCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTTGTCGT‑Gaa > 1:1473094/1‑150 (MQ=255) acatgattgtgTTTCGTTTTTCCGGGAGGGATTTAGATGCCGGTGTTGATATTGTCTCACTACAATCCGGCAGGCACGACGTCTGTTTGCCCTTCGCTGAAGGCTTGTTTAATTGAGGCGATCCAGTCGTGTGGGTTGTTGTCGT‑TTATg < 2:436228/143‑1 (MQ=255) aTGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACg < 2:489483/150‑1 (MQ=255) gtgtAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTTACGCt > 1:1020784/1‑150 (MQ=255) gtAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCttt < 2:3049924/150‑1 (MQ=255) aaCGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGt < 2:1854149/150‑1 (MQ=255) gTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTcgg < 2:3840021/150‑1 (MQ=255) cGGGAGGGATAAAAATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATTTTAAAGCATTTTagggcgggga > 1:1623899/1‑148 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAg > 2:2136971/1‑150 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCGTTGTCGGGCGGGAAg > 2:2579607/1‑150 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCGTTTTCGGGCGGGGAg > 1:1381425/1‑150 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGGGGGTTGTAGTCGT‑TTATTTTATCGCTTTTTAGGGCGGGGAg > 1:813156/1‑150 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTGGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATGTTAAACCATTTTagggcggggcg > 1:2974703/1‑147 (MQ=255) gggagggaTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCACTTAGCTGAAGGCTTGTTTAAATGATGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAAAGTTAACAAGTTGTAGGGCGGGaac > 2:3045420/1‑149 (MQ=255) gaTAAAGATGCCGGTGTTGATATTGTCACAAACCACTCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGcgcgcg < 2:3118412/150‑1 (MQ=255) aTAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCGGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCgg < 2:2364627/150‑1 (MQ=255) tAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCggg < 2:1520189/150‑1 (MQ=255) tAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTAGT‑TAATTTTAAAGCTTTGTAGGGCGGGAAGCGCGCggg > 2:4339073/1‑150 (MQ=255) aaaGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGc > 2:1017524/1‑150 (MQ=255) aTGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑GAATGTTAAAGCTTTGTCGGGCGGGAAGCGCGCGGGCGaaa > 1:1060157/1‑150 (MQ=255) tGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAg < 1:1238667/150‑1 (MQ=255) cGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGGGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGCAGCGCGCGGGCGAAAgggg > 2:2274723/1‑150 (MQ=255) tatTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATggagga < 1:2832330/150‑1 (MQ=255) tatTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGGTGTAGTCGTGTTTTTTTAAC‑CGTTGTGGGGGGGGGAGCGCGCGGGGGGAAGGGGGATgggggg > 1:1830766/1‑149 (MQ=255) atTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGaa < 1:1364484/150‑1 (MQ=255) atTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGaa < 1:646623/150‑1 (MQ=255) atTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGGTGTAGTCGT‑GAATGTTAACGCTTTTTCGGGCGGGGAGCGCGCGGGCGCAAGGGGTATGGTGGaa > 1:4353977/1‑150 (MQ=255) tCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCa < 2:3376056/150‑1 (MQ=255) aaaCCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATTTTAACGCGTTGTCGGGCGGGGAGCGCGCGGGCGAAAGGGGGATGGAGGAAGGCAAgcg > 1:1401794/1‑150 (MQ=255) aaaCCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGGGGGGTGTAGTCGT‑TAATGTTAACGCGTTGTCGGGCGGGGAGCGCGCGGGCGAAAGGGGGATGGAGGAACGCCAgcg > 2:2601752/1‑150 (MQ=255) ccAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCg < 1:2885471/150‑1 (MQ=255) ccAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCGTTTTCGGGCGGGAAGCGCGCGGGCGACAGGGGGATGGAGGAAGGCAAGCGCCg > 1:3212272/1‑150 (MQ=255) cAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGa > 2:2122587/1‑150 (MQ=255) cGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTATTCGT‑TTATTTTTAAGCGTTTTAGGGCGGGGAGCGCGCGGGCGGAAGGGGGATGGGGGAAGGCAAACCCCCAGcgtt > 1:3692036/1‑147 (MQ=255) cGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATTTTAAAGCGTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGGATGGAGGAAGGCAAGCGCCGAGCTTg > 1:361659/1‑150 (MQ=255) cGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTGGGGCGGGAAGCGCGCGGGGGAAAGGGGTATGGTGGAAGGCAAGCGCCCAGCTTg > 2:3669357/1‑150 (MQ=255) ggcaggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGGGGGGTGTAGGCGG‑GACTGTTAACGCGTTGTCGGGCGGGCAGCGCGCGGGCGCAAGGGGGAGGGAGGAAGGCCAGCGCCGAGCGTGc > 1:2802963/1‑150 (MQ=255) gcaggcaCTACGACTGTTTGCCCTTCGCTGAAGGCTTTTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCTT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCTAACGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGcc < 1:2381282/150‑1 (MQ=255) caggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCCGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCg < 2:1145456/150‑1 (MQ=255) aggcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGCAAGGGGGATGGAGGAAGGCAAGCGCCGAGCGTGCCGt > 2:3986098/1‑150 (MQ=255) gcaCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGGGCAAGGGGTCTGGAGGAAGGCAAACGCCGAGCtttgccgcc > 2:2230856/1‑143 (MQ=255) gcaCGACGACTGGTTGCCCTTCGCGGAAGGCTTGTTTACATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAACGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCa < 2:1796813/150‑1 (MQ=255) caCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATTTTAAATCGTTTTGGGGGGGGGAGCGCGCGGGCGGAATGGGTTTGGGGGAAGGCCAGCGCCGAGCTTTCCGTCAg > 1:2686216/1‑150 (MQ=255) caCGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCGTTGTAGGGCGGGGAGCGCGCGGGCGCAAGGGGTATGGTGGAAGGCAAGCGCCGAGCATGCCGTCAg > 1:3604135/1‑150 (MQ=255) acgacgACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTTAAGCGTTTTTGGGCGGGGAGCGCGCGGGGGGAAGGGGTTTGGGGGTAGGCAAGCGCCCAGCTTTCCCTCAgg > 1:884242/1‑150 (MQ=255) acgacgACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑GAATTTTAACGCTTTGTCGGGGGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGCGCTTGCCGTCAgg > 1:2535520/1‑150 (MQ=255) gacgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCGTTGTCGGGCGGGAAGCGCGCGGGCGTAAGGGGGATGGAGGAAGGCCAGCGCCGCGCTTGCCGTCAGGaa > 2:1571925/1‑150 (MQ=255) gacgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCTTTTTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTTCCGTCAGGaa > 2:1572067/1‑150 (MQ=255) acgacgGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAAc < 1:4278110/150‑1 (MQ=255) acgacTTTTTGCCCTTCGCTGAAGGCTTTTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTTTGGTGGAAGGCACGCGCCGAGCTTGCCGTCAGGAAc < 1:438686/150‑1 (MQ=255) acgacTGTTGGCCCTTCGCTGAAGGCTTGTTTAAATGCGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAAc < 1:3452428/150‑1 (MQ=255) cgacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGG‑TAATGTTAACGCTTTGTCGGGCGGGGAGCGCGCGGGCGAAAGGGGGATGGGGGTAGGCAACCGCCGAGCATTCCGTCAGGAACg > 1:607186/1‑150 (MQ=255) gacTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TTATGTTAACGCGTTGTCGGGCGGGGAGCGCGCGGGGGTAAGGGGGTTGGTGGTAGGCAAGCGCCGCGCTTGGCGTCAGGAACGt > 2:869160/1‑150 (MQ=255) acTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATTTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGGAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTg > 2:1945110/1‑150 (MQ=255) tGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCg < 2:1522407/150‑1 (MQ=255) cccTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGga < 2:1229314/150‑1 (MQ=255) cTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGgaga < 2:2898003/150‑1 (MQ=255) ttCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGagag < 2:2051487/150‑1 (MQ=255) tCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGt < 1:290488/150‑1 (MQ=255) gCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATTTTAACGCATTTTCGGGGGGGAAGCGCGCGGGGGCAAGGGGGATGGAGGAAGGCAAGCGCCGCGCTTGCCGGCCCGACCGTGCGTCGGGCGAGgtt > 1:1304618/1‑150 (MQ=255) gCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGG‑TTATGTTAACGCGTTGTCGGGCGGGGCGCGCGCGGGCGCAAGGGGGATGGAGGAAGGCACGCGCCGAGCGTGCCCGCAGGAAACTGCGTCGGGAGAGttt > 1:1304560/1‑150 (MQ=255) cTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGCAGCGCGCGGGCGAAAGGGGGAGGGAGGAAGGCAAGCGCCGAGCGTGCCGGCAGGACCGGGCGTCGGGAGAGtttt > 2:4225414/1‑150 (MQ=255) tGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TATTGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGttttt < 1:3114188/150‑1 (MQ=255) aaGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTa < 2:3352004/150‑1 (MQ=255) aaGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGGCGGGAGAGTTTTTTa > 2:2395056/1‑150 (MQ=255) ggCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACCCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCATGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTaaa > 2:3511551/1‑150 (MQ=255) gTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAAAGCTTTTTGGGGCGGGAAGCGCGCGGGCGTAAGGGGTATGGGTGAAGGCAAGCGCCGAGCGTTCCGTCAAGAACGTTCGTCGGGTGATTTTTTTATATGGCa > 1:327694/1‑150 (MQ=255) ttttAATTAGGCGATGCAGTCGTGTGGGTTGTTGTCGT‑TTATGTTAAGGTTTTTTCGGGGGGGATGCGCGCGGGCGAATGGGGTATGGTGGTAGGCAAGCGCCGAGCTTGCCGTCAGGTACGTGCGTCGGGAGAGTTTTTTAAATGGCAt < 1:3886103/150‑1 (MQ=255) ttAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCTAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATg < 1:92744/150‑1 (MQ=255) ttAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATg < 2:1427474/150‑1 (MQ=255) tGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAATGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTtc < 2:4019454/150‑1 (MQ=255) aGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTtctc < 2:1339473/150‑1 (MQ=255) ggCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcc < 1:4324449/150‑1 (MQ=255) gCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcct < 2:3945007/150‑1 (MQ=255) cGATCCAGTGGTGTGGGTTGTAGTCGT‑TATTGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAATGGGGTATGGAGGACGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcctc < 1:790559/150‑1 (MQ=255) cGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctcctc < 2:245425/150‑1 (MQ=255) cGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGGATGGAGGTATGCAAGCGCCGAGCTTTCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTctccac > 2:1730817/1‑148 (MQ=255) gATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCctct < 1:3362505/150‑1 (MQ=255) gATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCctct < 1:3499503/150‑1 (MQ=255) gTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAg < 2:1296614/150‑1 (MQ=255) cGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAACCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGcc > 2:2610158/1‑150 (MQ=255) gtgtGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCt < 2:3238935/150‑1 (MQ=255) gtgtGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTAGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTTCCGTCAGGAACGTTCGTCGGGAGAGTTTTTTAAATGGCATGCGTTATCCTCTATAAATCCt > 2:4193389/1‑150 (MQ=255) gtgGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGGGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTgc > 2:560485/1‑150 (MQ=255) gtgGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGGATGGAGGAAGGCAATCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTgc > 2:1714525/1‑150 (MQ=255) gggTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTgcag < 1:2307334/150‑1 (MQ=255) gggTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTgcag < 2:4300014/150‑1 (MQ=255) tGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAATCCTGCAGCAAg > 1:2500474/1‑150 (MQ=255) gTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATTCGTTCTCCTCTATAAAGCCTGCAGCAAGc > 1:1720235/1‑150 (MQ=255) gTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGc < 2:3434530/150‑1 (MQ=255) gTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGc < 2:1279837/150‑1 (MQ=255) gTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTgg < 1:730943/150‑1 (MQ=255) gTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTgg < 1:568188/150‑1 (MQ=255) gTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTgg > 2:303233/1‑150 (MQ=255) gTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTgg < 2:862657/150‑1 (MQ=255) tAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGt < 2:2920259/150‑1 (MQ=255) tAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGt > 1:1919559/1‑150 (MQ=255) aaTGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGtt < 1:2067518/150‑1 (MQ=255) aaTGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGtt < 1:3986098/150‑1 (MQ=255) | CTTCCAAGAATGTGTAACGTTTTACCGGGAGGGATAAAGATGCCGGTGTTGATATTGTCACAAACCAATCCGGCAGGCACGACGACTGTTTGCCCTTCGCTGAAGGCTTGTTTAAATGAGGCGATCCAGTCGTGTGGGTTGTAGTCGT‑TAATGTTAACGCTTTGTCGGGCGGGAAGCGCGCGGGCGAAAGGGGTATGGAGGAAGGCAAGCGCCGAGCTTGCCGTCAGGAACGTGCGTCGGGAGAGTTTTTTAAATGGCATGCGTTCTCCTCTATAAAGCCTGCAGCAAGCTGGCGAGTT > CP009273/2109118‑2109416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |