| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,758 | C→A | 7.2% | intergenic (‑75/+233) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,758 | 0 | C | A | 7.2% | 483.2 / 2.9 | 168 | intergenic (‑75/+233) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (82/66); new base A (15/4); total (98/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 178 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170609‑2170906 | aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 2:2250553/150‑1 (MQ=255)aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATc < 2:3172288/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGATATTATTTGTTTTTAAATATCGAGATAACGATca < 2:3479080/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATca < 2:1499638/150‑1 (MQ=255) gAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACGAACACaaaa > 2:3627076/1‑150 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACg < 2:3236417/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTAGATTTAAAAATATAATTTAATTATTTTTTTTTTAATATAGAGATAAATATaaaaaaaaag > 2:639737/1‑148 (MQ=255) gCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGa < 2:2101935/150‑1 (MQ=255) gAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGGGTTTAAAAAAATAAATAAAATTTTTTTTTTTTAATATATAGATAAAGATaaaaaaaaacaccaa > 1:3320505/1‑143 (MQ=255) aCCGCATAACCGCCGCGCTGTGGTTTGTTCAGATTGTTCTTGGTCTATACCACGTACTTTTTAATTTCTTGTGTT‑TTTTTTTCTATTTAAAAATATAATTAATTTTTTTTTTTTTAAATATGGATATAACGATCACAAAAACGACAatat < 2:920333/150‑1 (MQ=255) ccGCATCACCGCCGGGCTGTGGGTTTTTCTGCTTGTGCTTTGTCTATACAACTTAAATTTTAATATCCTGTCTT‑TTGTTTTCTTTTTAAAAATATAATTAATTTTTTTTTTTTTAAATATCGATTTAACTATCACAAAAACGACAATATg < 2:4105296/150‑1 (MQ=255) ccGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGTTTTTTAAAAAATAATTAAAATATTTTTTTTTTAATATAGTGATAAACATAAAAAAAACAACAaaatt > 1:573695/1‑149 (MQ=255) tacccgcggCGCGGTGCTTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTGGT‑TTGTTTTCTATTAAAAAATATAATTAATTTTTTTTTTTTTAAATATCTTGATAACGATAAAAAACACGACAATATGAAAat < 1:4208005/147‑1 (MQ=255) tAACCGCCGGGGTGTGCGTTGTTAAGCTTCTGGTTTGTCTATACCACGTAAATTTTCATATCATGTCGT‑TTGTTTTCTATTTAAAATTATAATTAAATTTTTTTTTTTTAAATTTCTATATAACGATCACAAAAACGACAATATGAAAat < 2:4041539/150‑1 (MQ=255) tAACCGCCGCGCTGTGGGTTTTTCAGCATTTGCTTTGTCGATACCCCTTAAATTTTCATATCCTGTGTT‑TTGTTTTCGATTAAAAAATATATTTAATTTTTTTTTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAat < 2:2181803/150‑1 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACTTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAAAAAAACGACAATATGAAAat < 2:1422499/150‑1 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTGGATTTGAAAAAAAAATTAAAATATTTTTTTTTTAAAATAGAGATAAACAACACAAAAAAAACaaaattaaaatt > 1:2365189/1‑150 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGGGTTTAAAAAAAAAATTTAATTATTTTTTTTTAAATATAGAGGTTACGAACACAAAAAAGACAAAATGagaaat > 1:3572728/1‑148 (MQ=255) aaCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGGATTTAAAAAAATAAAGAAAATATTTTTTTTTTTATATATGGATAAAAATAACAAAAAACACAAAATGtaaaat > 1:1381501/1‑148 (MQ=255) aaCCGCCGCGCTGTGCGTTGTCCAGCATCTGCTTTGTCTATACCACGTACTTTTAAATATCCTTTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAatt < 2:4335389/150‑1 (MQ=255) aCCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGGTTTGGATTTAAAAATATAATTAAAATATTTTTTTTTTAAAATAGAGATGACGATCACAAAAACAACAAAATGAAAaata > 1:2089058/1‑150 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTc < 2:1423091/150‑1 (MQ=255) gcTGGGCGTGGTACAGCATCTGCTTTTTCGATACCACTTACTTTTTCATATCCTGTCTT‑TTTTTTTCTATTTAAAAATATAATCAATTTATTTGTTTTTAAATATCGATATAACGACCACAAAAACGACAATATGAAAATTATTCgagga < 2:20638/150‑1 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTTTTTTGGATTTAAAAATATAATTAAAATATTTTTTTTTTAAAATAGCGATAAAGATAAAAAAAAACAAAAAATTAAAAATATTAgaggag > 1:2512430/1‑150 (MQ=255) cTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GGGTTTTTTTTTTTTAAATATAATTTAAATATTTTTTTTTTTATATTAAGATAAAGATCAAAAAAAAAACAAAAATAAAaatattattggtg > 1:2944850/1‑143 (MQ=255) tgtgCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGt < 2:649562/150‑1 (MQ=255) tgtgCGTTGTACACCATCTGCTTTTTCCACACCACTAACATTTTCATACCCTGTCTT‑TTTTTTTCTATTAAAAAATATAATTAATTTATTTTTTTTTAAATATCGAGAAAACTAACACAAACACGACAATATGAAAATTATTCGAGGAGt < 1:1222719/150‑1 (MQ=255) tgCGTTGTTCAGCATCTGCTTTGTCTATCCCCCGTAAATTTTCATATCCTGTCGT‑TTGTTTTCGTTTACAAAATATAATCAATTTTTTTTTTTTTAAATATCTAGATACCGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGa < 2:1086602/150‑1 (MQ=255) gttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTTTTTTAGATTTAAAAATATAATTAAAATAATTTTTTTTAAATATCGAGATAAACAAAAAAAAAAAGACAAAATGAAAATTATTAGAGGGGTGTAAGGCa > 2:1695729/1‑150 (MQ=255) gttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTTTTTTAGATTTAAAAAAAAAAATAAAATATTTTTTTTTAAATATCGAGATAACGATAACAAAAAAGAAAAAAAGAAAAATATTAGAGGAGTTGAAGGCa > 2:1692722/1‑150 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGGATTTAAAAAAAAAATTAAAAAAATTTTTTTTTAATATAGAGAAAAACAAAACAAAAAAAACAAAAAGAAAATTAATAGAGGACTGTAAGGCaa > 1:1366525/1‑150 (MQ=255) tgttttGTCGATCCCCCGTAAATTTTCATATCCTGTGTT‑TTTTTTTCTTTTAAAAAATATAATTAATTTTTTTTTTTTTAAATATCGATATAACGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGc < 1:3890938/147‑1 (MQ=255) tttGTCTATACCACGTACATTTTCATATCCTGTCGT‑TTTTTTTCGATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTc < 2:355657/150‑1 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTAGATTTAAAAATATAATTAAATTATTTTTTTTTTAATATCGAGATAAAGATAACAAAAAAGACAATATTAAAATTATTGGAGGAGTGTAAGGGAAAAAAAAGGCCTCCCGaa > 2:3568260/1‑149 (MQ=255) cGATACCACGTACATTTTCATATCCTGTCGT‑GTGTTTTGGATTTCAAAATATAATGAAAATATTTTTTTTTAAATATCGAGTTAACGATCACAAAAACGACACTATGAAAATTATTAGAGGGGTGAAAGGCCAAAAAACCGCCACCCGag > 2:1933523/1‑149 (MQ=255) tACCACTTAAATTTTCATATCGTGTCTT‑TTTTTTTCTATTAAAAAATATAATAAAATTATTTTTTTTTAATTATCTATATAACTATCAAAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAgg < 1:3477800/150‑1 (MQ=255) aCCACGTACATTTTCATATCCTGTCGT‑GTGTTTTTGATTTGAAAATATAATTAAAATATTTTTTTTTTAATTTAGAGTTTACGATAACCAAAACGACAATATTAAAATTTTTAGGGGGGGGTAATGGAAAAAAAAGGCCTGCCGCTTggg > 2:4163751/1‑150 (MQ=255) cACTTACTTTTTCTTATCTTGTCTT‑TTTTTTTCTTTTTAAAAATATAATTAATTTTTTTTTTTTTAAATATCTTGATACCGAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 1:1015078/150‑1 (MQ=255) cACGTACATTTTAATAACCTGTCTT‑TTTTTTTATATTTAAAAATATAATTAATTTATTTTTTTTTAAATATCTATATAACTATAAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 1:323275/150‑1 (MQ=255) aCGTACATTTTCATATCCTGTCGT‑GTGTTTTAGCTTTAAAAAAATAATGAAATTATTTGTTTTTTAATATCGAGATTACGATAACAAAAACGACAATATGACAATTATTGGAGGAGTGGAAGGCACAAAAAACGCCACCCGCTAGGGGAg > 2:2767416/1‑150 (MQ=255) cGTACATTTTCATATCCTGTCGTGTTGTTTT‑GATTTAAAAATAAAATGAAAATATTTTTTTTTTAAAATAGAGATAACGATAAAAAAAAACACCAAAATAAAATTATTAGGGGTGTGGAAGGCAAAAAAAACGCCACCCCAGAGGGGAGc > 2:780183/1‑150 (MQ=255) gTACATTTTAAGACCCTGTCTT‑TTGTTTTCGATTCAAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:2212713/150‑1 (MQ=255) gTAAATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc < 2:258000/150‑1 (MQ=255) cATTTTCATATCCTGTCGT‑GTGTTTTGGTTTTAAAAATATAATGAAAATATTTTTTTTTTAATATAGAGTTAACGATCACAAAAAAGACAAAATGAAAATTTTTAGAGGGGTGTGAGGGAAAAAAAAAGCCTCCCGAGAGGGACGCCGTa > 2:1188035/1‑150 (MQ=255) ttCATACCCTTTCTT‑TTTTTTTCTTTTTAAAAATATAATTAAATTTTTTTTTTTTAAATATCTATATAACTAACACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaa < 1:272193/150‑1 (MQ=255) ttggt‑ttttttTCGATTTCAAAATATAATTAATTTATTTGTTTTTAAATATCTATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg < 2:1154006/147‑1 (MQ=255) gTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGAAAATATGAAAATTATTCGAGTTGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:3891515/1‑150 (MQ=255) tgt‑ttgtttTCTATTTAAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt < 2:4038696/149‑1 (MQ=255) cGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtt > 1:2076831/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 1:1871674/1‑150 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAGATTATTGGTGGAGTGTAAGGCAATAAAACGGCGTCGGGATGGGGTAGCCGTAGCTAGGTGCGGGGGtttgtttggg > 1:2194285/1‑143 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAACGTGCGCGTGTTTTTATGcc > 1:1704703/1‑150 (MQ=255) tCGATTAAAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg < 2:2664572/150‑1 (MQ=255) gATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 2:895190/150‑1 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:1532058/1‑150 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:3778258/1‑150 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:1197641/1‑150 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 1:3516482/1‑150 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 2:366207/1‑150 (MQ=255) aaaaTATAAGGAAATTATTTGTTTTTAAATATCGAGATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt < 2:2167928/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATACCTATCAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 2:1599636/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 2:1950920/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 2:3786297/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa > 2:2611032/1‑150 (MQ=255) tataATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa > 1:377334/1‑150 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:1565843/1‑150 (MQ=255) atcaaaTTTTTTGTTTTTAAATATCGAGATAACTAACAAAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 1:2638438/147‑1 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGGGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 2:3978639/1‑150 (MQ=255) gAATTTTTTTGTTTTAAAAAAGCTATAAACCTATCACAAACACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc < 1:3677316/150‑1 (MQ=255) aacttattTGTTTTTAAATAGCGACATACCGACCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAACAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 2:3415553/147‑1 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGACGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2782926/1‑150 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:3048304/1‑150 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:2050259/1‑150 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:612143/1‑150 (MQ=255) atttattTTTTTTTAAATATCTATATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 2:3677718/148‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:4214145/1‑150 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:3049232/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 1:2324550/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:3158147/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 1:839015/1‑150 (MQ=255) ttGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGt > 1:3639118/1‑150 (MQ=255) tttttttAAATATCGATATAACTATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg < 1:2118949/148‑1 (MQ=255) tttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 2:221579/1‑150 (MQ=255) ttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATg > 1:525443/1‑150 (MQ=255) ttAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATg > 1:988420/1‑150 (MQ=255) aaaTATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa > 2:437976/1‑150 (MQ=255) atatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:2918708/1‑150 (MQ=255) tatCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc > 2:3700742/1‑150 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:1193542/1‑150 (MQ=255) atCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa < 1:2747002/150‑1 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTCGGCATg > 2:1300413/1‑150 (MQ=255) cGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg > 2:3589646/1‑150 (MQ=255) gagaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGa > 1:2429206/1‑150 (MQ=255) gaTAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTCTGTAGGCATGATa > 1:2993249/1‑150 (MQ=255) tAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAg > 1:444943/1‑150 (MQ=255) gATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:2344720/1‑150 (MQ=255) gATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:251104/1‑150 (MQ=255) aTCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCt > 1:2645352/1‑150 (MQ=255) tCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt > 1:127202/1‑150 (MQ=255) tCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt < 2:2729521/150‑1 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGT‑TTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCACAAAAACGACAATATGAAAATTATTCGAGGAGTGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTT > CP009273/2170609‑2170906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |