| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,303,607 | A→C | 9.3% | L93R (CTG→CGG) | ada ← | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,303,607 | 0 | A | C | 9.3% | 722.7 / 15.7 | 316 | L93R (CTG→CGG) | ada | fused DNA‑binding transcriptional dual regulator/O6‑methylguanine‑DNA methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (121/152); new base C (36/4); total (157/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 336 total aligned reads displayed.
ATTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGGCG > CP009273/2303458‑2303756 | aTTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCcagca < 2:134808/150‑1 (MQ=255) cgcgCAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTc > 2:1137666/1‑150 (MQ=255) cgcgCAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGGTCCAGCAGTc > 2:1907722/1‑150 (MQ=255) gcAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGac < 1:3258829/150‑1 (MQ=255) gcAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGac < 1:2407618/150‑1 (MQ=255) cAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGaca > 2:3486593/1‑150 (MQ=255) aaaCGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGacac < 2:3191165/150‑1 (MQ=255) aaCGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACAcg > 1:2695973/1‑150 (MQ=255) cGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCGTCCAGCGTTACAGGCGTGTCCTGTTCCAGCCGTCGACAcgcg > 1:2788248/1‑150 (MQ=255) cGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGAGGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACAcgcg < 2:1680191/150‑1 (MQ=255) cGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTgg < 2:2491589/150‑1 (MQ=255) gAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTggg > 1:3596907/1‑150 (MQ=255) aGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGt > 1:695991/1‑150 (MQ=255) gcgcgcCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTg < 1:1166579/150‑1 (MQ=255) gcgcgcCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTg < 2:3630802/150‑1 (MQ=255) cgcCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGAtt < 2:3256362/150‑1 (MQ=255) cgcCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGAtt < 1:1143209/150‑1 (MQ=255) cAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTCACAGGCGTTTCCTGTTCCAGCAGTCGCCACGCGTGGGTGATTTTa > 2:3717091/1‑150 (MQ=255) ccTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCa < 1:1493593/150‑1 (MQ=255) cTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCAGTTCCATCAGTCGACACGCGTGGGTGATTTTATACaa > 1:924570/1‑150 (MQ=255) cTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCAGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCaa > 1:1415776/1‑150 (MQ=255) gTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAAcc < 1:1355497/150‑1 (MQ=255) gCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGAt < 1:1112257/150‑1 (MQ=255) ccAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATg < 1:761123/150‑1 (MQ=255) aGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGtt < 1:2359193/150‑1 (MQ=255) aGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGtt < 2:3801025/150‑1 (MQ=255) tAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑TCTggg > 1:1280971/1‑150 (MQ=255) gCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTCAGGCTTCCAGCGTTACAGGCGTGTCCGGTTCCAGCAGTCGACACGCGTGGGGGCTTTTATCCAACCGAGGGT‑GCTGGGcct > 2:2211220/1‑148 (MQ=255) gCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGGGGGTGATTTTATCCAACCGAGGTT‑GCTGGGCAt > 2:4192288/1‑150 (MQ=255) gCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATACAACCGATGTT‑GCTGGGcct > 1:1727239/1‑148 (MQ=255) cGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATTGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCAGTTACAGCAGTCGACACCCCGGGGTGATTTTATACAAACGAAGTT‑TCTggggctt > 1:4116566/1‑146 (MQ=255) cGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCAtt < 1:2946190/150‑1 (MQ=255) gTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTg < 1:3519290/150‑1 (MQ=255) tCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTgg < 2:1123681/150‑1 (MQ=255) cATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCAACGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTGTCCTGTTCCAGCAGTCGACACCCGTTGGTGATTTTATACAACCCATTTT‑TCTGGGCATTGGc > 1:49326/1‑150 (MQ=255) aTTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCt > 2:2461177/1‑150 (MQ=255) ttCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTT‑CAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCttt < 2:3997221/150‑1 (MQ=255) ccGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCtttt < 2:910728/150‑1 (MQ=255) cGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGTTTTTATCCAACCGATGTT‑GCTGGGCCTTGGCttttt > 2:2896425/1‑150 (MQ=255) cGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCttttt < 1:1541434/150‑1 (MQ=255) gTAGTCGCTTTAAACAACCGATGTAGATGAAAAGGACTCATCGCCACCAGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTGCAGGTACACCCGTCGACACCCGTGGGTGATTTTATACAACCGATTTT‑TGTGGGCAATGGCtttttaa > 1:1069257/1‑148 (MQ=255) tCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCCGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCt > 2:3391345/1‑150 (MQ=255) ttAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACCCGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACaa > 2:4048077/1‑150 (MQ=255) tAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAAACGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAAc > 1:4171766/1‑150 (MQ=255) aaaCAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACg > 2:3165774/1‑150 (MQ=255) aaaCAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACg < 1:999942/150‑1 (MQ=255) aaaCAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACg < 2:2357711/150‑1 (MQ=255) caacCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGttt < 2:3771160/150‑1 (MQ=255) caacCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGttt < 1:4260457/150‑1 (MQ=255) caacCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGttt < 2:848847/150‑1 (MQ=255) gATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAgg < 2:2096928/150‑1 (MQ=255) aTGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAggg < 1:161658/150‑1 (MQ=255) tGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAgggg < 1:771460/150‑1 (MQ=255) tGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAgggg < 2:3030343/150‑1 (MQ=255) gTAGATGAAATGGACTCATTGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCCGGGGc > 2:1893259/1‑150 (MQ=255) gTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGc > 1:2337261/1‑150 (MQ=255) gTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCCTTGGCGTTTTCGGGCTGACAACGTTTGCAGGGGc > 2:2991380/1‑150 (MQ=255) tAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCg < 1:1955200/150‑1 (MQ=255) aGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGa > 2:1308194/1‑150 (MQ=255) aGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGa > 2:1446307/1‑150 (MQ=255) gATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGCCACGCGGGGGTGATTTTATCCAACCGCTGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACCACGTTTGCAGGGGCgca > 2:1094760/1‑148 (MQ=255) gATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTTCAGGGGCGaa > 2:465698/1‑150 (MQ=255) gATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGaa < 2:2070260/150‑1 (MQ=255) tGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAg < 1:2989822/150‑1 (MQ=255) aaaTGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACACGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGcc > 1:598485/1‑150 (MQ=255) aTGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTGTCCGGTTCCAGCCGGCGCCCCGCGGGGGGGATTTTATCCAACCGATGTT‑GCGGGGCATTGGCTTTTTCTGGCGGACAACGTTTGCAGGGGCGAAAGCCAg > 1:3068090/1‑150 (MQ=255) tGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAgc > 1:2174697/1‑150 (MQ=255) ggACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAgcg < 1:1005054/150‑1 (MQ=255) gACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAgcgg > 2:710405/1‑150 (MQ=255) gACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGAGGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAgcgg > 2:2880446/1‑150 (MQ=255) aCTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCCgcggc > 1:3893746/1‑150 (MQ=255) cATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCAGTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAg > 2:3525316/1‑150 (MQ=255) gCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGCTGTT‑GCTGGGCCTTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGcc > 1:559280/1‑150 (MQ=255) cagcTGGGCGGATAAGGCTTCCAGGGTTACTGGCGTTTCTTTTTCCTGCAGTCGACCCGGGTGGGTTTTTTTATCCAACCGTTGTT‑GCTGGGCTTTGGCTTTTTGTGGCTTAAAACTTTTGCTGGGGCGAAAGCCAGCGGCGAGTGCCTc < 1:3772524/147‑1 (MQ=255) cACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATACAAACGCTGTT‑TGTGGGGATTTGCTTTTTATGGCTGACAACGTTTTCATGGGCGAAAGCCAGCGGCGAGTGCCTc > 1:3402764/1‑150 (MQ=255) ccTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTTCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGc > 2:3680221/1‑150 (MQ=255) cTGGTCGGATAAGGCTACCAGCGTTACCGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCt < 2:3323111/150‑1 (MQ=255) gTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGc < 2:4325408/150‑1 (MQ=255) tAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCCGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCCTTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCCTTTGc > 2:771994/1‑150 (MQ=255) tAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACCCGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACTTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGc < 2:1711689/150‑1 (MQ=255) ggCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTa > 2:2394865/1‑150 (MQ=255) gCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAg > 2:588549/1‑150 (MQ=255) tCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGATTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAg < 2:2603824/150‑1 (MQ=255) ccAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAgg < 2:2340745/150‑1 (MQ=255) ccAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCGGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAgg < 2:691012/150‑1 (MQ=255) cAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCTTTGGCTTTTTCTGGCTGACACCGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGga < 2:3892743/150‑1 (MQ=255) aGCGTTACCGGCGTTTCCTGTTCCAGCCGCCGACCCGCGTGGGTTTTTTAAACCAACCG‑TGTTGGCTGGGATTGGGGTTTTTCTGGCTGACAAGGTTTGCTGGGGCCAACCCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGgag < 1:372882/150‑1 (MQ=255) gCGTTACCGGCGGTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCGGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGgaga < 1:3883667/150‑1 (MQ=255) cAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGtttt > 1:3731469/1‑150 (MQ=255) cGTTTCCTGTTCCAGCAGTCGACAGGCGTGGTTTTTTTTATCCAACCGAGGTT‑GGTGGGAATTGGATTTTTCTGGCTGACAACGTTTGCTGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCg < 1:4048077/150‑1 (MQ=255) ttCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCaa > 1:1012745/1‑150 (MQ=255) ttCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCaa > 1:4356512/1‑150 (MQ=255) ttCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCaa < 2:2788248/150‑1 (MQ=255) ttCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCaa > 2:1253866/1‑150 (MQ=255) tGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCa > 2:3457737/1‑150 (MQ=255) cagcagTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCt < 1:2536285/150‑1 (MQ=255) cagTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGgc > 1:2471238/1‑150 (MQ=255) cagTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGgc > 1:2612695/1‑150 (MQ=255) agTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGgcg < 1:2099162/150‑1 (MQ=255) agTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGgcg > 1:2040307/1‑150 (MQ=255) | ATTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGCCAGGCTTTAGGCGTCATTCCGGTAGTCGCTTTAAACAACCGATGTAGATGAAATGGACTCATCGCCACCTGGTCGGCTAAGGCTTCCAGCGTTACAGGCGTTTCCTGTTCCAGCAGTCGACACGCGTGGGTGATTTTATCCAACCGATGTT‑GCTGGGCATTGGCTTTTTCTGGCTGACAACGTTTGCAGGGGCGAAAGCCAGCGGCGAGTGCCTCGCTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAGCATGTCTGGCG > CP009273/2303458‑2303756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |