Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,463,906 C→A 21.6% Q433K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,463,9060CA21.6% 221.0 / 20.0 115Q433K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (17/68);  new base A (22/7);  total (40/75)
Fisher's exact test for biased strand distribution p-value = 1.07e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 117 total aligned reads displayed.

CTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCC  >  CP009273/2463768‑2464055
                                                                                                                                          |                                                                                                                                                      
ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAtaaataaa                                                                                                                                             >  2:2301976/1‑150 (MQ=255)
   tttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGAc                                                                                                                                          <  2:4253089/150‑1 (MQ=255)
    ttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACa                                                                                                                                         <  1:561427/150‑1 (MQ=255)
     tGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATTAAAAAATTAAAAGAAATAAAGaaaa                                                                                                                                        >  1:140890/1‑150 (MQ=255)
      ggAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAt                                                                                                                                       <  2:3632165/150‑1 (MQ=255)
       gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                      <  2:3653568/150‑1 (MQ=255)
                 aTTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAAAAATTAAAAAAAAAAAAAAAAAAAAAGATGTaaa                                                                                                                           >  1:2090012/1‑150 (MQ=255)
                    ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                        <  2:3693429/150‑1 (MQ=255)
                    ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAATTAAAATAAATAAAAACAAAATCGATGTAAATCa                                                                                                                        >  2:1057150/1‑150 (MQ=255)
                        gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTaa                                                                                                                    <  1:1558029/150‑1 (MQ=255)
                        gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAATAAAAAGAAAACAAAAAAAAAACGATGTAAAGAACaaa                                                                                                                    >  2:2315783/1‑150 (MQ=255)
                           tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGtt                                                                                                                 <  2:826789/150‑1 (MQ=255)
                             aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATTAAATAATTAAAAGAAATAAAGACAATATAGATGTAAAGAACAAATTTTa                                                                                                               >  2:2307041/1‑150 (MQ=255)
                                tttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAAt                                                                                                            <  1:2140724/150‑1 (MQ=255)
                                   cGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgc                                                                                                         <  1:3687493/150‑1 (MQ=255)
                                       gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTTTAAAATAAATAAAAAAAAAAAATACAAAAGCGATTTAAATAACAAATTTTAAATTtagcgc                                                                                                     >  2:2019363/1‑150 (MQ=255)
                                       gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAATAAATAAAAAAAAAAGCGATTTAAAGCACAAAGTTTAAATTtagcgc                                                                                                     >  2:2019362/1‑150 (MQ=255)
                                       gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAAAAAAAAAAACAAAAACGAAGTAAAACACAAAGTTTAAATTtagcgc                                                                                                     >  2:191808/1‑150 (MQ=255)
                                              ataGAGATTTAAGCAAGCATTTATTTGGAATGTCTTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAATAATTGAAAAAAAACAATTAAAAAACGGTGTGAAGCACGAAGTTTAAATTTGGGGCCAATCaa                                                                                              >  2:2728402/1‑149 (MQ=255)
                                              ataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAAAAATTAAAAGAAATAAAAACAAAATCGATTTAGATCACAAATTGTAAATTTGGCGCCAAACaa                                                                                              >  2:556500/1‑149 (MQ=255)
                                               taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAATAATTAAAATAAAAAAAGAAAAAAGAGATTTTAATCACAAATTTTAAATTTCGCGCCAAACaat                                                                                             >  2:2317762/1‑148 (MQ=255)
                                                agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTATTTTATAAAATAAATCAAAGAAATAAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTTAGCGCCaataattg                                                                                            >  2:3184996/1‑148 (MQ=255)
                                                agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTTTAAAATAAATAAAATTAATAAAGACAATAACGATTGAAATCGAGAATTTTTAATTTGGCGCCAGACATgg                                                                                            >  2:447740/1‑150 (MQ=255)
                                                 gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgc                                                                                           <  1:1077333/150‑1 (MQ=255)
                                                  agaTTTAAGCAAGCATTTATTTTGAATGTATTTTTCGTTCGAACTTTGCTTATTCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcg                                                                                          <  2:2563226/150‑1 (MQ=255)
                                                      ttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAAAAAATCAAATAAAAAAAAACAAAATCGATTTAAATAAAAAAAGTTAAATTTAGCGCCACACAATgcgcgcc                                                                                      >  1:2149982/1‑149 (MQ=255)
                                                       tAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTAATTTTATAATAATTAAAAAAAAAAAAAACAAAATCGAAGTCAATCACAAAATTTAAATATAGAGCCAAACATTgcgcgccc                                                                                     >  2:2185963/1‑148 (MQ=255)
                                                       tAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGATAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcac                                                                                     <  1:2071023/150‑1 (MQ=255)
                                                       tAAGAATGCATTTATTTGGAATGTATTTTTAGTTCGACCTTTGCTTATACATAACATTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGATAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATAATGGCGCGcac                                                                                     <  1:2072675/150‑1 (MQ=255)
                                                        aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTAAAAAATAATTAAAATAAAAAAAGAAAAAAGAGATGTAAAGCACAAAATTTAAATTTAGCGCCACTCAAGGCGCGcaca                                                                                    >  2:4300406/1‑150 (MQ=255)
                                                           caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGc                                                                                 <  1:4341469/150‑1 (MQ=255)
                                                            aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAAAAAATCAAAAAAAAAAAGAAAAAAGAGATGTAAATCACTAAGTTTAAAATTAGCGCCCATCAAGGCGCGCACaaccg                                                                                >  2:614061/1‑147 (MQ=255)
                                                               caTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAAGAAAACAAAAAAAAATCGAAGTAAAACACAAATTTTAAATTTCGCGCCCAAAAAGGCGCGCACCATCtata                                                                             >  2:3179887/1‑150 (MQ=255)
                                                                         ttttttATTTTTGGTTCGACCTTTGCTTATAAATAACTTTGTTTTTTTTAATTTTTAAAATAATTCAAATAAATCAAGACAATCGCTTTTTAAAGCACTATTTTTAATGGGCGCGCAAATCTTGGCGCGCACAAGCTATAATACCAACCt                                                                   <  1:1157100/145‑1 (MQ=255)
                                                                          aaTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTa                                                                  <  2:1043904/150‑1 (MQ=255)
                                                                          aaTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTa                                                                  <  2:1043979/150‑1 (MQ=255)
                                                                          aaTGTATTTTTCGTTCGACCTTTGATTATACATAACAGTCGTTTTTTTAATTAATAAAATAATTCAATGAAATCAAGACAATAGCGATGTAAAGCACTAATTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTa                                                                  <  1:66299/150‑1 (MQ=255)
                                                                               aTTTTTCTTTCGACCTTTGATTATAAATAACAGTTTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAACCAAATCGCGATGTAAAGCACTAAGTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                             <  1:523397/150‑1 (MQ=255)
                                                                               aTTTTTCGTTCGACATTTGATTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTATGTTTAAATTGCGCGCCAATCTTGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                             <  1:523539/150‑1 (MQ=255)
                                                                                tttttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                            <  2:2753126/150‑1 (MQ=255)
                                                                                tttttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                            <  2:2753361/150‑1 (MQ=255)
                                                                                  tttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAAGAAATAAACACAAAATCGATGTAAATCACAAAGTTTAAATTTCGCGCCAAAAATGGCGCGCCCAAGCTATAATAACAACCAAAattatac                                                          >  2:4301077/1‑146 (MQ=255)
                                                                                  tttCGTTCGACATTTGATTATACATAACATTCTTTTTTTTAATTTATAAAATAATTAAAATAAATCAAGACAATAGCTTTTTAAAGCACTAAGTTTAAATTGCGCGCCAATCTTGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                          <  2:2192921/150‑1 (MQ=255)
                                                                                    tcgttctACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctc                                                        <  1:2757257/150‑1 (MQ=255)
                                                                                      gttcgACCTTTGATTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTATTTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcct                                                      <  1:1305956/150‑1 (MQ=255)
                                                                                        tctacttttGATTATACTTAACTTTATTTTTTTTAATTTAAAAAATAATTAAAATAAATAAATAAAATAGCTTTGTAAAGCAATATTTTTAAATTGCGCGCAAATAATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCctct                                                    <  1:4079970/144‑1 (MQ=255)
                                                                                         cgACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCtt                                                   <  2:459225/150‑1 (MQ=255)
                                                                                         cgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCtt                                                   <  2:457650/150‑1 (MQ=255)
                                                                                             cTTTGCTTATACATAAAAGTCGTTTTTTTAATATATAAAATAATTAAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                               <  2:3639196/150‑1 (MQ=255)
                                                                                             cTTTGCTTATAAATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                               <  2:3639152/150‑1 (MQ=255)
                                                                                             attttattATACATAACTGTCTTTTTTTTAATTTATAAAATATTTAAAATAAATCAAGACAATAGCGATGTAAAGCACTATGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                               <  1:2728402/144‑1 (MQ=255)
                                                                                              tttGTTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGAAAATAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                              <  1:2301976/150‑1 (MQ=255)
                                                                                                tGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                            <  2:2496351/150‑1 (MQ=255)
                                                                                                 gattATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                           <  2:794815/148‑1 (MQ=255)
                                                                                                 gCTTATACATAACATTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                           <  1:2019023/150‑1 (MQ=255)
                                                                                                 gCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATTTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                           <  1:2017625/150‑1 (MQ=255)
                                                                                                 gCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                           <  2:795299/150‑1 (MQ=255)
                                                                                                       aCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtc                                     <  1:635171/150‑1 (MQ=255)
                                                                                                       aCATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtc                                     <  1:3600976/150‑1 (MQ=255)
                                                                                                        cATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATCGCGTTGTAAAGCACTATTTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtct                                    <  1:81887/150‑1 (MQ=255)
                                                                                                         aTAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtctc                                   <  2:2306131/150‑1 (MQ=255)
                                                                                                           aaCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCt                                 <  1:4288372/150‑1 (MQ=255)
                                                                                                               gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCCTGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                             >  1:1720834/1‑150 (MQ=255)
                                                                                                               gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                             <  1:1057150/150‑1 (MQ=255)
                                                                                                                 cttttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                           <  2:2257776/148‑1 (MQ=255)
                                                                                                                 cGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                           <  1:2742384/150‑1 (MQ=255)
                                                                                                                 cGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGACAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                           >  1:3679477/1‑150 (MQ=255)
                                                                                                                 cGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATGGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                           <  1:571496/150‑1 (MQ=255)
                                                                                                                    ttttttAATTTATAAAATAATTCAAATAAATCATTACAATTTCTATTTAATTCACTATGTTTTATTTGCGCGCCATTCATGGCTCGCACAATCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAtt                        <  1:334064/150‑1 (MQ=255)
                                                                                                                    ttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAtt                        <  2:4023004/150‑1 (MQ=255)
                                                                                                                    ttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAtt                        <  1:334047/150‑1 (MQ=255)
                                                                                                                    ttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAtt                        <  2:4253018/150‑1 (MQ=255)
                                                                                                                      ttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                      >  1:125907/1‑150 (MQ=255)
                                                                                                                      ttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                      <  2:1483958/150‑1 (MQ=255)
                                                                                                                       tttAATTTATAAAATAATTCAAATAAATCAAGACAATCGCGATGTAAAGCACTATTTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                     <  2:772063/150‑1 (MQ=255)
                                                                                                                       tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                     <  2:3103808/150‑1 (MQ=255)
                                                                                                                       taaaaTTTATAAAATAATTCAAAGAAAACAAGACAATAGCGATTTAAACCACTATTTTTAAATTGCGCGCCAATCAGGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                     <  1:769800/147‑1 (MQ=255)
                                                                                                                        ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                    <  2:2314820/150‑1 (MQ=255)
                                                                                                                        ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                    <  2:2314745/150‑1 (MQ=255)
                                                                                                                        ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTCCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                    >  1:1922916/1‑150 (MQ=255)
                                                                                                                         tAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATAATGGCGCGCACAAGCTATAATACCAACCTAATTTATCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGt                   >  1:2392046/1‑150 (MQ=255)
                                                                                                                          aaTTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTa                  <  2:4154861/150‑1 (MQ=255)
                                                                                                                            tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                <  2:2774961/150‑1 (MQ=255)
                                                                                                                            tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                <  2:2774945/150‑1 (MQ=255)
                                                                                                                               ataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCGATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc             <  2:1355927/150‑1 (MQ=255)
                                                                                                                                taAAATAATACAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCAGGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACt            <  1:1149629/150‑1 (MQ=255)
                                                                                                                                 aaatTATTTCAATTAAATCAAGACAATTTCGATGTAACGCACTAAGTTTAAATTGCGCGCGAATCATGGCGCGCACTAGCTATAATACCAACCTAATGTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa           <  2:1937230/150‑1 (MQ=255)
                                                                                                                                 aaaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa           <  2:62374/150‑1 (MQ=255)
                                                                                                                                  aaaTAATTCAAAGAAATCAAGACAATAGCGAATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa           <  2:1937266/150‑1 (MQ=255)
                                                                                                                                  aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt          >  1:4303197/1‑150 (MQ=255)
                                                                                                                                  aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt          >  1:4303207/1‑150 (MQ=255)
                                                                                                                                   aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc         >  2:1896991/1‑150 (MQ=255)
                                                                                                                                   aataatTAAAAGAAATCAAGACAATAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc         <  1:2317762/150‑1 (MQ=255)
                                                                                                                                    ataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCa        >  2:2739565/1‑150 (MQ=255)
                                                                                                                                        ttCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg    <  2:1283032/150‑1 (MQ=255)
                                                                                                                                         tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGc   >  1:1751498/1‑150 (MQ=255)
                                                                                                                                         tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGc   >  2:91755/1‑150 (MQ=255)
                                                                                                                                         tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGc   <  2:3111053/150‑1 (MQ=255)
                                                                                                                                          cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc  >  2:1903277/1‑150 (MQ=255)
                                                                                                                                          cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc  >  2:3426996/1‑150 (MQ=255)
                                                                                                                                          |                                                                                                                                                      
CTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCC  >  CP009273/2463768‑2464055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: