| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,545,908 | C→A | 8.3% | G66G (GGC→GGA) | amiA → | N‑acetylmuramoyl‑l‑alanine amidase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,545,908 | 0 | C | A | 8.3% | 824.0 / 40.5 | 240 | G66G (GGC→GGA) | amiA | N‑acetylmuramoyl‑l‑alanine amidase I |
| Reads supporting (aligned to +/- strand): ref base C (102/118); new base A (10/10); total (112/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 249 total aligned reads displayed.
TGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTACGA > CP009273/2545760‑2546057 | tGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCAcggcg < 1:870099/150‑1 (MQ=255)tGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCAcggcg > 2:4250176/1‑150 (MQ=255) ccGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTg < 1:3539305/150‑1 (MQ=255) cGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGa < 1:3094444/150‑1 (MQ=255) tttGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATAc < 2:4133881/150‑1 (MQ=255) tGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGAGGACTTGATACCg > 2:513247/1‑150 (MQ=255) ggCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCgg > 1:2567293/1‑150 (MQ=255) cTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAg < 2:1912586/150‑1 (MQ=255) tGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGc > 1:2115486/1‑150 (MQ=255) ccTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGAt < 2:381641/150‑1 (MQ=255) tGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCg < 1:4267779/150‑1 (MQ=255) gTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACg > 2:1015966/1‑150 (MQ=255) gTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCACACGTGTCGGTGTTCTCGATCCCGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCac > 2:2326052/1‑149 (MQ=255) gTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCaa < 1:1937223/150‑1 (MQ=255) cAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACg < 2:3038900/150‑1 (MQ=255) ggAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGt < 1:3742542/150‑1 (MQ=255) gAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGtt > 1:2348413/1‑150 (MQ=255) gAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGtt > 2:1193706/1‑150 (MQ=255) aaGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCgaaagaaa < 2:4166856/150‑1 (MQ=255) aaGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCgaaagaaa > 1:1969539/1‑150 (MQ=255) aGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGaaaa < 2:1652778/150‑1 (MQ=255) aGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGaaaa < 1:2039327/150‑1 (MQ=255) aGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGaaaa < 1:2039187/150‑1 (MQ=255) ccATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAAc < 1:939588/150‑1 (MQ=255) tCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGGTCGAAAGAAAAACAtg > 2:3497941/1‑150 (MQ=255) gCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGACAAACAtgtg > 2:3662910/1‑150 (MQ=255) gCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACAtgtg > 2:424055/1‑150 (MQ=255) cAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATgtggt < 2:2772106/150‑1 (MQ=255) aaaGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATgtggtg < 2:1554743/150‑1 (MQ=255) gAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCg > 2:1368051/1‑150 (MQ=255) aaCTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGa > 2:3166596/1‑150 (MQ=255) aCTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAt > 2:1933374/1‑150 (MQ=255) aCTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAt < 2:1695928/150‑1 (MQ=255) cTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAtt < 1:1519468/150‑1 (MQ=255) cTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGAtt < 1:1296116/150‑1 (MQ=255) ttttAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTg < 1:3148606/150‑1 (MQ=255) aaaaaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaa > 1:4063887/1‑150 (MQ=255) aaaaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaaa > 2:4054777/1‑150 (MQ=255) aaaaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaaa > 1:1553756/1‑150 (MQ=255) aaaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaaaa > 1:936398/1‑150 (MQ=255) aaCCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTaaaaa < 2:1367418/150‑1 (MQ=255) cAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGt < 1:3668284/150‑1 (MQ=255) aGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTc < 2:1822505/150‑1 (MQ=255) gCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTcc < 2:957218/150‑1 (MQ=255) aaCGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGt > 2:2655961/1‑150 (MQ=255) cGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAACGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTc > 2:2462768/1‑150 (MQ=255) cGGACACAGAAAGCCTAAAGCCAAAAAATCTGGCGGCAAACGTGTCTTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAATAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTc < 1:3883569/150‑1 (MQ=255) ggACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTcc > 2:2504336/1‑150 (MQ=255) ggACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTcc < 1:4314459/150‑1 (MQ=255) ggACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTcc > 1:4089143/1‑150 (MQ=255) ggACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATACAGGTCACGGCGGAATTGATAACGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTcc > 1:1188994/1‑150 (MQ=255) acaTCAAGCCTAAAGCAAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCAttt < 2:3634253/150‑1 (MQ=255) ccgaaaGCCTAAAGCAAAAAAATCTGGCGGAAAACGTGTCTTTGTCCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAATAAAAACATGTGGTGCTGGCGATTGCAAAAAACGTCCGTTCCAtttt < 1:2966388/146‑1 (MQ=255) caGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCTGGTCAGGGCGGATTTGATACCGGAGCGATCGGACGAAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCAtttt < 1:794074/150‑1 (MQ=255) caGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCAtttt < 1:4286601/150‑1 (MQ=255) caGCAAGCCGAAAGCCAAAAAATCTGGCGGAAAACGTGTCGTTGTTCTCGATCCCGGTCACGGCGGAATTGATACCGGAGCTATCGGACGCAAGGGTTCGAAAGAAAAACTTGTGGTGCTGGCGTTTGCTAAAAACGTCCGTTCCAtttt < 1:1838151/150‑1 (MQ=255) cAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCg > 1:440439/1‑150 (MQ=255) cAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCg > 1:3429850/1‑150 (MQ=255) ctaaaGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATc < 2:2064237/148‑1 (MQ=255) gAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCa < 2:1377354/150‑1 (MQ=255) aaGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATg < 2:1327529/150‑1 (MQ=255) cAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGAt < 2:3850653/150‑1 (MQ=255) aaaaaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGAtt > 2:261934/1‑150 (MQ=255) aaaaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTg < 2:1463855/150‑1 (MQ=255) aaaaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTg < 1:4337477/150‑1 (MQ=255) aaaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCCGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGa < 1:3806149/150‑1 (MQ=255) aaaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGa < 1:3279575/150‑1 (MQ=255) aaaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCAACGCGGAATTGATACCCGAGCGAAAGGACGCAAAGGTTCGAAAGAAAAACATGTGGTTCTGGCGAGTTATAAAAAAGTACGTTACAGTATGCGTAATCCTCGGATAGAt > 1:3114076/1‑150 (MQ=255) aaTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATg < 2:2108452/150‑1 (MQ=255) aTCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATgc > 1:2688139/1‑150 (MQ=255) cTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATgcgc > 2:2732361/1‑150 (MQ=255) cTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTAGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATgagc > 2:1875690/1‑150 (MQ=255) cTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATgcgc > 1:325331/1‑150 (MQ=255) tGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGcgcg > 1:2454066/1‑150 (MQ=255) cAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAAc > 1:3500758/1‑150 (MQ=255) aaCGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAAcgc < 2:2930598/150‑1 (MQ=255) aCGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAAcgcg < 2:2099075/150‑1 (MQ=255) aCGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATGGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGGGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAAcgcg < 2:4001483/150‑1 (MQ=255) gtgtCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGtt < 1:4140273/150‑1 (MQ=255) gtCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCt < 2:3301998/150‑1 (MQ=255) gtCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCt < 1:2892947/150‑1 (MQ=255) cGTTGTTCTCGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTgg > 1:633552/1‑150 (MQ=255) gttgttCTCGCTCCCGGTCACGGCGGAATTGATCCCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGGGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGc < 1:3034103/150‑1 (MQ=255) gttCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGAt > 1:1024116/1‑150 (MQ=255) ttCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATa > 1:264989/1‑150 (MQ=255) tctcGATCCAGGTCACGGAGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATAc < 2:3580362/150‑1 (MQ=255) tcGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGt > 1:2184377/1‑150 (MQ=255) cgttCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCTATACGtt < 2:116124/147‑1 (MQ=255) cGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGtt > 1:316915/1‑150 (MQ=255) cGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGtt > 1:3788391/1‑150 (MQ=255) gATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGttt < 2:3728852/150‑1 (MQ=255) gATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGttt < 2:3380793/150‑1 (MQ=255) gATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGttt > 1:768422/1‑150 (MQ=255) gATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGttt > 2:876583/1‑150 (MQ=255) tCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTAt < 2:3968021/150‑1 (MQ=255) cAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATcc < 2:652424/150‑1 (MQ=255) cggcggAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTa < 1:188369/150‑1 (MQ=255) cggcggAATTGAGACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGATAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTa < 1:2997426/150‑1 (MQ=255) ggcggAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTAc < 1:2765800/150‑1 (MQ=255) cggAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTACGa > 2:3126895/1‑150 (MQ=255) | TGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTACGA > CP009273/2545760‑2546057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |