Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,695,549 C→A 6.2% E94* (GAA→TAA)  recO ← gap repair protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,695,5490CA 6.2% 1208.1 / 35.4 314E94* (GAA→TAA) recOgap repair protein
Reads supporting (aligned to +/- strand):  ref base C (148/146);  new base A (7/13);  total (155/159)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

ACCCAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTCAGGGTAG  >  CP009273/2695400‑2695698
                                                                                                                                                     |                                                                                                                                                     
aCCCAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTc                                                                                                                                                       <  2:1319115/150‑1 (MQ=255)
aCCCAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTc                                                                                                                                                       <  1:3153847/150‑1 (MQ=255)
aCCCAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTc                                                                                                                                                       <  1:1955842/150‑1 (MQ=255)
 cccAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCg                                                                                                                                                      <  1:4281360/150‑1 (MQ=255)
 cccAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCg                                                                                                                                                      <  1:2093391/150‑1 (MQ=255)
 cccAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCg                                                                                                                                                      <  1:2433937/150‑1 (MQ=255)
     gATGCCCGAGCAGTGCCAGTTCACCGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTACTCGAAAAAAAGTTCAGAGCAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGa                                                                                                                                                  <  2:345516/150‑1 (MQ=255)
     gATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGa                                                                                                                                                  >  2:1784570/1‑150 (MQ=255)
     gATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTAGTCCAGTACGCGGGAGAGAAGTTAGTTGa                                                                                                                                                  <  2:2698913/150‑1 (MQ=255)
      aTGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGAt                                                                                                                                                 >  1:1635696/1‑150 (MQ=255)
      aTGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGAt                                                                                                                                                 <  2:2794653/150‑1 (MQ=255)
        gCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGt                                                                                                                                               <  1:2990034/150‑1 (MQ=255)
          ccGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTAc                                                                                                                                             >  2:2825592/1‑150 (MQ=255)
                 gTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGc                                                                                                                                      <  2:1470533/150‑1 (MQ=255)
                     cAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTa                                                                                                                                  >  2:2845371/1‑150 (MQ=255)
                      aGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTaa                                                                                                                                 <  1:1797322/150‑1 (MQ=255)
                       gTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTaaa                                                                                                                                <  1:1562529/150‑1 (MQ=255)
                            aaGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTg                                                                                                                           >  1:2650746/1‑150 (MQ=255)
                                  cgcAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCg                                                                                                                     <  1:984111/150‑1 (MQ=255)
                                  cgcAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCg                                                                                                                     <  1:3227440/150‑1 (MQ=255)
                                     aGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCtt                                                                                                                  <  1:3318308/150‑1 (MQ=255)
                                      gcgcGGGTTCTGGCGTACCAGTGACCACTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTa                                                                                                                 >  2:3644869/1‑150 (MQ=255)
                                           ggTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGc                                                                                                            <  2:446517/150‑1 (MQ=255)
                                            gTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCa                                                                                                           <  2:1058650/150‑1 (MQ=255)
                                                 ggCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGcc                                                                                                      <  2:357115/150‑1 (MQ=255)
                                                  gCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCa                                                                                                     <  2:609271/150‑1 (MQ=255)
                                                        cAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCgaga                                                                                               >  1:2216095/1‑150 (MQ=255)
                                                         aGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGAc                                                                                              <  2:3356517/150‑1 (MQ=255)
                                                             aCCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCt                                                                                          <  1:3291082/150‑1 (MQ=255)
                                                              ccccTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCtt                                                                                         <  2:3802146/150‑1 (MQ=255)
                                                              ccccTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCtt                                                                                         <  1:909626/150‑1 (MQ=255)
                                                              ccccTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCtt                                                                                         <  1:3771979/150‑1 (MQ=255)
                                                                ccTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCa                                                                                       <  2:2974995/150‑1 (MQ=255)
                                                                 cTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAg                                                                                      >  1:2178708/1‑150 (MQ=255)
                                                                   gCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCa                                                                                    <  1:3383254/150‑1 (MQ=255)
                                                                   gCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCa                                                                                    <  2:3042776/150‑1 (MQ=255)
                                                                    cAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCAc                                                                                   <  1:1806150/150‑1 (MQ=255)
                                                                    cAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCAc                                                                                   >  2:2052092/1‑150 (MQ=255)
                                                                     aaGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACt                                                                                  >  1:2732390/1‑150 (MQ=255)
                                                                     aaGAGACTGAAGGCAGTGCACGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGAGACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACt                                                                                  <  2:3260924/150‑1 (MQ=255)
                                                                          aCTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCGCGTATTCCAGTACGCGGGAGAGAAGTTCGGGGATGTCCAGACCGCTGTAAAGCGTGATACCGCTGAATGGCAGCGCAAGCGCGCCGGCGTCAGCACGgctcc                                                                             >  2:902223/1‑147 (MQ=255)
                                                                           cTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAg                                                                            >  1:2286822/1‑150 (MQ=255)
                                                                               aTGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGtt                                                                        >  2:810840/1‑150 (MQ=255)
                                                                                  cAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTg                                                                     <  2:3488015/150‑1 (MQ=255)
                                                                                     tGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACt                                                                  <  2:4095411/150‑1 (MQ=255)
                                                                                     tGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACt                                                                  >  1:3388476/1‑150 (MQ=255)
                                                                                      gCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACtt                                                                 <  2:3925338/150‑1 (MQ=255)
                                                                                       cAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTc                                                                >  1:581030/1‑150 (MQ=255)
                                                                                        aaGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCg                                                               >  1:223163/1‑150 (MQ=255)
                                                                                         aGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGc                                                              >  1:2950804/1‑150 (MQ=255)
                                                                                            aaTCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAc                                                           >  2:4316479/1‑150 (MQ=255)
                                                                                             aTCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcg                                                          >  1:4114265/1‑150 (MQ=255)
                                                                                                gAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcgccc                                                       <  1:2609742/150‑1 (MQ=255)
                                                                                                 aaaaaaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcgcccg                                                      >  1:2826141/1‑150 (MQ=255)
                                                                                                 aaaaaaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcgcccg                                                      >  1:412465/1‑150 (MQ=255)
                                                                                                  aaaaaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcgcccgc                                                     >  2:1662853/1‑150 (MQ=255)
                                                                                                   aaaaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCAcgcccgcc                                                    >  1:3810970/1‑150 (MQ=255)
                                                                                                    aaaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCa                                                   >  2:3425048/1‑150 (MQ=255)
                                                                                                     aaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCaa                                                  >  2:3022325/1‑150 (MQ=255)
                                                                                                     aaaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCaa                                                  >  2:1142134/1‑150 (MQ=255)
                                                                                                      aaGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCaaa                                                 >  2:1972428/1‑150 (MQ=255)
                                                                                                       aGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCaaaa                                                >  1:3717737/1‑150 (MQ=255)
                                                                                                         ttCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACg                                              <  1:2422374/150‑1 (MQ=255)
                                                                                                          tCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGt                                             >  1:1460912/1‑150 (MQ=255)
                                                                                                           cAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTa                                            >  2:66/1‑150 (MQ=255)
                                                                                                            agagAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAg                                           <  1:1444771/150‑1 (MQ=255)
                                                                                                            agagAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAg                                           <  2:1342874/150‑1 (MQ=255)
                                                                                                             gagaAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGc                                          >  2:1206675/1‑150 (MQ=255)
                                                                                                              agaAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTAGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCa                                         >  2:1724712/1‑150 (MQ=255)
                                                                                                               gaAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCaa                                        >  1:1109381/1‑150 (MQ=255)
                                                                                                                 aGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAaga                                      >  1:1317251/1‑150 (MQ=255)
                                                                                                                 aGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAaga                                      >  1:1860242/1‑150 (MQ=255)
                                                                                                                  gcgcGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAagag                                     <  2:3290505/150‑1 (MQ=255)
                                                                                                                   cgcgTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAagaga                                    <  2:1742524/150‑1 (MQ=255)
                                                                                                                     cgTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAgg                                  >  1:2378744/1‑150 (MQ=255)
                                                                                                                     cgTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAgg                                  <  2:2013959/150‑1 (MQ=255)
                                                                                                                      gTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAggg                                 >  1:1224052/1‑150 (MQ=255)
                                                                                                                       tctcGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAgggg                                <  1:2675561/150‑1 (MQ=255)
                                                                                                                        ctcGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGt                               >  1:3991196/1‑150 (MQ=255)
                                                                                                                           gTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGaa                            <  2:2933389/150‑1 (MQ=255)
                                                                                                                            tATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGaaa                           <  1:4041801/150‑1 (MQ=255)
                                                                                                                             aTTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAg                          <  1:4188482/150‑1 (MQ=255)
                                                                                                                              ttCCCGTACGCGGGAGAGAAGTTCGTTGATGGACAGACCGCTGTAAAGCGTGAGACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAgg                         <  2:221095/150‑1 (MQ=255)
                                                                                                                              ttCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAgg                         >  1:2139376/1‑150 (MQ=255)
                                                                                                                              ttCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAgg                         >  2:1409416/1‑150 (MQ=255)
                                                                                                                              ttCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAgg                         <  1:3565140/150‑1 (MQ=255)
                                                                                                                                  aGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGt                     <  1:664531/150‑1 (MQ=255)
                                                                                                                                   gTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTa                    <  2:604984/150‑1 (MQ=255)
                                                                                                                                     aCGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAAt                  <  2:352021/150‑1 (MQ=255)
                                                                                                                                      cgcgGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATg                 >  2:3737764/1‑150 (MQ=255)
                                                                                                                                        cgGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCa               <  2:2584393/150‑1 (MQ=255)
                                                                                                                                         gggAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCAc              >  2:2629604/1‑150 (MQ=255)
                                                                                                                                          ggAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCAcc             >  2:4008754/1‑150 (MQ=255)
                                                                                                                                           gagagaAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCt            <  1:3653738/150‑1 (MQ=255)
                                                                                                                                            agagaAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCtt           <  1:4356712/150‑1 (MQ=255)
                                                                                                                                              agaAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTc         >  2:4266338/1‑150 (MQ=255)
                                                                                                                                              agaAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTc         >  1:4214469/1‑150 (MQ=255)
                                                                                                                                                aaGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTCAg       >  2:192719/1‑150 (MQ=255)
                                                                                                                                                aaGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTCAg       <  1:4005024/150‑1 (MQ=255)
                                                                                                                                                aaGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTCAg       >  1:2470640/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCCAGATGCCCGAGCAGTGCCAGTTCAAAGCGGCGCAGCGCGGGTTCTGGCGTACCAGTGACCCCTGCAAGAGACTGAATGCAGTGCAAGTAATCGAAAAAAAGTTCAGAGAAGCGCGTCTCGTATTCCAGTACGCGGGAGAGAAGTTCGTTGATGTACAGACCGCTGTAAAGCGTGATACCGCTTAATGGCAGCGCCAGCGAGACGGCTTCAGCACTGCGCAGCGTTTTGACTTCGCCACGCCCGCCAAAACGTAGCAAGAGAGGGGTGAAAGGCTGTAATGCACCTTTCAGGGTAG  >  CP009273/2695400‑2695698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑