| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,831,086 | C→A | 54.7% | E127* (GAA→TAA) | hydN ← | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,831,086 | 0 | C | A | 54.7% | 0.9 / inf | 279 | E127* (GAA→TAA) | hydN | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit |
| Reads supporting (aligned to +/- strand): ref base C (50/76); new base A (64/88); total (114/165) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01 | |||||||||||
Only 100 of 279 total aligned reads displayed.
TAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTATCA > CP009273/2830938‑2831234 | tAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCCTACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCg > 2:116149/1‑150 (MQ=255) aGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAgg > 2:3572840/1‑150 (MQ=255) aaCATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTAAGATCGACACAAATCAGCGCATGATTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCt > 2:120571/1‑150 (MQ=255) aCATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCtt < 2:493267/150‑1 (MQ=255) cATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAATTTTATTACGATCGACACAAAACAGCGCATGTGTCGGGCAAGCCGCCAAACACCCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCttt > 1:1753660/1‑150 (MQ=255) aTCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTg > 2:677044/1‑150 (MQ=255) aGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCa < 1:1608399/150‑1 (MQ=255) aGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATAAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTTGCTTAGGCTTTTTCa > 2:2307653/1‑150 (MQ=255) gcgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAg < 2:2025024/150‑1 (MQ=255) gcgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAg < 1:3928258/150‑1 (MQ=255) gcgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAg < 2:452088/150‑1 (MQ=255) gcgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAg < 2:243929/150‑1 (MQ=255) gcgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAg < 2:2661888/150‑1 (MQ=255) cgcCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATAAGCGCATGAGTAGGGCCAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTAAGc > 2:178404/1‑150 (MQ=255) ccGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGccc < 1:3003260/150‑1 (MQ=255) cGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTTTTACGATCGAAACAAATAAGCGCAAGTGTCGGGCAAGCCGCCCAACACGCCGGGCCGTCTTCCCGATGGGTGCACAGGTAGCAATTATTGGCGTCGGCTTTGTAAGCCCg > 2:3298101/1‑150 (MQ=255) cGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCg < 2:1444091/150‑1 (MQ=255) gTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTAAGATCGACACAAAAAAGCGCCTGAGTAGGGCAAGCCCCCAAACACCCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTTGCTTAGGCTTTGTAAGcccct > 1:4322693/1‑148 (MQ=255) aCGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTAc < 1:4058656/150‑1 (MQ=255) cggcggCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACa > 2:2075772/1‑150 (MQ=255) gcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAg < 2:3620808/150‑1 (MQ=255) gcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAg < 2:2700720/150‑1 (MQ=255) gTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGAc > 2:3767717/1‑150 (MQ=255) tCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCcgcg < 2:3683124/150‑1 (MQ=255) cgcTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGcgccgc > 2:298651/1‑150 (MQ=255) cTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTg < 2:2467658/150‑1 (MQ=255) cTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTg > 1:3723036/1‑150 (MQ=255) tCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGt > 1:3464756/1‑150 (MQ=255) tCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGt > 1:2682140/1‑150 (MQ=255) cAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGtt < 1:3753186/150‑1 (MQ=255) aGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTg < 1:3900820/150‑1 (MQ=255) gttgttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGc > 1:2725071/1‑150 (MQ=255) ttgttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCg < 2:1144937/150‑1 (MQ=255) tgttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCgg > 2:2997299/1‑150 (MQ=255) aGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCAcc < 1:2849082/150‑1 (MQ=255) aGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCAcc > 1:624090/1‑150 (MQ=255) gTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCg < 2:2855442/150‑1 (MQ=255) tattaCGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGAc < 2:2770235/150‑1 (MQ=255) tattaCGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGAc < 2:2382784/150‑1 (MQ=255) taCGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTa > 2:3852085/1‑150 (MQ=255) cGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTacc > 1:3345452/1‑150 (MQ=255) aTCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTaccac > 2:795038/1‑150 (MQ=255) tCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTaccacc < 1:4310095/150‑1 (MQ=255) cGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTAccacca > 2:2831609/1‑150 (MQ=255) acacAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACt < 1:1174488/150‑1 (MQ=255) acacAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACt < 1:4220417/150‑1 (MQ=255) cacaAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACtt < 1:1902521/150‑1 (MQ=255) cacaAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACtt > 2:2816935/1‑150 (MQ=255) cacaAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACtt > 1:2084736/1‑150 (MQ=255) aaTCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCAt < 2:2208865/150‑1 (MQ=255) aTCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATc > 1:2537035/1‑150 (MQ=255) tCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCg < 2:1663951/150‑1 (MQ=255) tCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCg < 1:2801033/150‑1 (MQ=255) aGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCa > 2:3174897/1‑150 (MQ=255) gcgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAc < 2:3360414/150‑1 (MQ=255) gcgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAc < 1:3476500/150‑1 (MQ=255) gcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCa < 1:3816713/150‑1 (MQ=255) gcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCa < 1:149039/150‑1 (MQ=255) gcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCa > 2:1824864/1‑150 (MQ=255) aTGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATa < 1:1151437/150‑1 (MQ=255) aTGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATa < 2:4215894/150‑1 (MQ=255) aTGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATa > 1:511823/1‑150 (MQ=255) tGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACCTTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCCCCATAc > 2:1267791/1‑150 (MQ=255) tGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATAc < 1:4148730/150‑1 (MQ=255) gAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACg > 2:2879858/1‑150 (MQ=255) aGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACgg < 1:730826/150‑1 (MQ=255) tCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGc < 2:3961668/150‑1 (MQ=255) tCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGc < 2:4005575/150‑1 (MQ=255) gggCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCaa > 1:2285520/1‑150 (MQ=255) aGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCcac > 1:1117031/1‑150 (MQ=255) gccgccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCcaca < 1:3562592/150‑1 (MQ=255) cgccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAAc < 1:977325/150‑1 (MQ=255) cgccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAAc > 2:2495487/1‑150 (MQ=255) cgccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAAc < 1:903300/150‑1 (MQ=255) cATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCa > 2:1220144/1‑150 (MQ=255) cATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCa > 2:2932942/1‑150 (MQ=255) cGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGtttt < 2:3417760/150‑1 (MQ=255) ccGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGc < 1:1943286/150‑1 (MQ=255) ccGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCa < 1:2142728/150‑1 (MQ=255) gTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAAt < 1:3078016/150‑1 (MQ=255) cTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGc < 1:1788162/150‑1 (MQ=255) aCGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACg < 1:1994373/150‑1 (MQ=255) aTGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTc > 2:554683/1‑150 (MQ=255) tGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTcc > 1:1500196/1‑150 (MQ=255) tGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTcc > 1:2161580/1‑150 (MQ=255) ggTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCt < 2:348132/150‑1 (MQ=255) gTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTg < 1:259662/150‑1 (MQ=255) tGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCa < 1:4006010/150‑1 (MQ=255) tGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCa < 1:3033711/150‑1 (MQ=255) tGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCa < 1:1305711/150‑1 (MQ=255) tCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGa < 2:3091680/150‑1 (MQ=255) ttATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAAc < 2:2801110/150‑1 (MQ=255) ttGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCt < 2:1908988/150‑1 (MQ=255) tGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCtt < 2:1189314/150‑1 (MQ=255) tGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCtt < 2:2078848/150‑1 (MQ=255) ggCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCttt < 1:3687954/150‑1 (MQ=255) ggCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCttt < 1:3170593/150‑1 (MQ=255) ggCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCttt > 2:149510/1‑150 (MQ=255) gCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTa < 2:428732/150‑1 (MQ=255) tCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTATCa > 1:2149080/1‑150 (MQ=255) | TAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTATCA > CP009273/2830938‑2831234 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |