| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,022,888 | C→A | 19.0% | R468L (CGG→CTG) | ygfT ← | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,022,888 | 0 | C | A | 19.0% | 956.7 / 160.9 | 338 | R468L (CGG→CTG) | ygfT | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (131/142); new base A (46/19); total (177/161) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.21e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 346 total aligned reads displayed.
CACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGGC > CP009273/3022739‑3023037 | cacaAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTcc > 2:119544/1‑150 (MQ=255) acaAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCg > 1:3044481/1‑150 (MQ=255) aaGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCa > 2:3067621/1‑150 (MQ=255) aaGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCa > 1:3149779/1‑150 (MQ=255) gCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCaaa > 2:2404250/1‑150 (MQ=255) gATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACa > 2:35281/1‑150 (MQ=255) gATAGATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATGAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACa < 2:1737893/150‑1 (MQ=255) tatatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAAt > 2:163678/1‑150 (MQ=255) tatatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAAt > 2:4093154/1‑150 (MQ=255) tatatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAAt > 1:1039152/1‑150 (MQ=255) atatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATc > 1:3134217/1‑150 (MQ=255) atTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCa < 2:2171407/150‑1 (MQ=255) atTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCa > 2:3221712/1‑150 (MQ=255) ttGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCAt < 2:3812442/150‑1 (MQ=255) tGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCAtt < 1:4242992/150‑1 (MQ=255) gCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTg < 1:682501/150‑1 (MQ=255) ggTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTc > 1:4170044/1‑150 (MQ=255) ggTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTc > 1:4207926/1‑150 (MQ=255) tGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTa < 1:88663/150‑1 (MQ=255) gAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTAt < 1:199942/150‑1 (MQ=255) aaCATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATc < 1:3256331/150‑1 (MQ=255) aaCATTGAACTGAAACTCGACACCTTCCTCGCGCGCATGAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATc < 2:3632368/150‑1 (MQ=255) aTTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGcc > 1:972226/1‑150 (MQ=255) tGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCAc < 1:2997641/150‑1 (MQ=255) gAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCAcc > 1:4229605/1‑150 (MQ=255) gAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCAcc < 2:497845/150‑1 (MQ=255) aaCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCg > 2:4000277/1‑150 (MQ=255) tGAAACTCGACACCTTCCTCGCGCGCATGAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGccc < 2:806042/150‑1 (MQ=255) gAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCa < 2:3771343/150‑1 (MQ=255) gAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCa > 2:3367451/1‑150 (MQ=255) aaaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCaa > 2:1853778/1‑150 (MQ=255) aaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAAt < 1:2308127/150‑1 (MQ=255) aCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATa < 1:2297597/150‑1 (MQ=255) cTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATAc > 2:3526865/1‑150 (MQ=255) gACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCAc > 2:3040744/1‑150 (MQ=255) acacCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACg > 2:867968/1‑150 (MQ=255) acacCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACg > 1:3859506/1‑150 (MQ=255) acacCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACg < 1:1440037/150‑1 (MQ=255) cacCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGa > 1:3507306/1‑150 (MQ=255) acCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGAc > 2:1976780/1‑150 (MQ=255) cgcgcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCt > 1:831903/1‑150 (MQ=255) gcgcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCtt < 2:2957511/150‑1 (MQ=255) cgcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTc < 1:2042734/150‑1 (MQ=255) gcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTcc > 2:44543/1‑150 (MQ=255) aTTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAc < 2:2576829/150‑1 (MQ=255) tAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAcgt > 1:2431109/1‑150 (MQ=255) aaCCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAcgtc > 2:739101/1‑150 (MQ=255) caccTCTTTGCGCGAGCCCGGCATACTGACGTCATCACGACGATCCGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACACTCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAcgtccgt < 2:3695079/150‑1 (MQ=255) ccTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCa < 2:2296561/150‑1 (MQ=255) ccTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCa > 2:3438236/1‑150 (MQ=255) ctctTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAg > 1:149351/1‑150 (MQ=255) ctgggcgcGAGCCCGGCATACTGCCTTCATCCCGCCGATACGCGCCGGTCACGCTGGCGGCATTGCGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCg < 1:4045497/146‑1 (MQ=255) ctTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCg < 2:893392/150‑1 (MQ=255) ttGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCTTTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGa < 1:2801828/150‑1 (MQ=255) gcgcGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa < 2:4207926/150‑1 (MQ=255) cgcgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAc < 1:1216306/150‑1 (MQ=255) cgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActc > 1:3997847/1‑150 (MQ=255) ccGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCACCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAg < 1:2508092/150‑1 (MQ=255) cGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGa < 1:3570697/150‑1 (MQ=255) aTACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTcc > 1:322884/1‑150 (MQ=255) tACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCg < 2:2703648/150‑1 (MQ=255) aCTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCgg > 1:452410/1‑150 (MQ=255) aCTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCAACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCgg < 2:2878859/150‑1 (MQ=255) tGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCa < 1:4080157/150‑1 (MQ=255) tGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCa < 1:1464821/150‑1 (MQ=255) cTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATc > 2:1524994/1‑150 (MQ=255) cTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATc > 2:144152/1‑150 (MQ=255) catcaCGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCa < 1:4146384/150‑1 (MQ=255) tcaCGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATg < 1:1672839/150‑1 (MQ=255) aTACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCACTCCCATGAGCTGGCg > 2:1329545/1‑150 (MQ=255) gcgcAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTa < 2:39597/150‑1 (MQ=255) cgcAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTCCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTAt > 1:76756/1‑150 (MQ=255) cAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATgg < 2:2277233/150‑1 (MQ=255) ggTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGc < 2:3149779/150‑1 (MQ=255) tCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAg < 1:642875/150‑1 (MQ=255) cACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGt > 1:527288/1‑150 (MQ=255) cGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCa > 2:2672345/1‑150 (MQ=255) gCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAg < 2:1956723/150‑1 (MQ=255) tGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATGCCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGa > 1:2193514/1‑150 (MQ=255) ggcggcATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGaa < 2:1291634/150‑1 (MQ=255) ggcATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACgg > 1:2736872/1‑150 (MQ=255) cATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa < 2:3948600/150‑1 (MQ=255) cATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa > 2:2630742/1‑150 (MQ=255) aTTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTag > 1:2651902/1‑150 (MQ=255) aTTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTag > 2:2141565/1‑150 (MQ=255) tGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTagag > 2:2059844/1‑150 (MQ=255) tGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTagag > 2:4121499/1‑150 (MQ=255) gAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGc < 1:3765319/150‑1 (MQ=255) aGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGcc < 1:3964384/150‑1 (MQ=255) aGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGcc < 2:4292545/150‑1 (MQ=255) cGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGa > 1:957186/1‑150 (MQ=255) gATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAt < 1:18938/150‑1 (MQ=255) gATGGAAGTCCGCAAACAATCCAGTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAt < 2:3022944/150‑1 (MQ=255) aTGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATg > 1:2874096/1‑150 (MQ=255) aTGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATg > 1:2090675/1‑150 (MQ=255) tGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGa > 2:1563582/1‑150 (MQ=255) tGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGa > 1:171061/1‑150 (MQ=255) aaGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGacac > 1:3342236/1‑150 (MQ=255) ccGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCggg > 2:2444229/1‑150 (MQ=255) cGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGgc > 1:437517/1‑150 (MQ=255) | CACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGGC > CP009273/3022739‑3023037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |