| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,263,502 | C→T | 5.8% | intergenic (+541/+73) | yhaC → / ← rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,263,502 | 0 | C | T | 5.8% | 555.0 / 15.2 | 208 | intergenic (+541/+73) | yhaC/rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| Reads supporting (aligned to +/- strand): ref base C (148/44); new base T (3/9); total (152/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAA > CP009273/3263353‑3263650 | aCTGACCGATCAGCCGCTTTCTTGTGGGTATAGGGTCGTGGACAGTCATTCCTCTTTCTGCCCCTCCAAAAGCAAACACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAACCTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgtc < 2:3485420/150‑1 (MQ=11) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGcgtc < 2:461343/150‑1 (MQ=37) gACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCCTTCAAATTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTCAAACAGGTGAAACGGACCGATAAGCCGCTTTCTTTTGGGTATAGcgtgggg > 1:3471137/1‑146 (MQ=11) gACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTg < 1:1013435/150‑1 (MQ=37) gACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCGGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTg < 1:2920685/150‑1 (MQ=37) gATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTAAAGCGTAGTGGaaa > 2:1370793/1‑148 (MQ=255) gATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAATCCGCTTTATTTTGGGTATAGCGTCGTggtac > 1:4216251/1‑147 (MQ=11) aTAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAAACTTTCTGCCCCTCCAAAATCAAAAAACCGCCGAAGCGGGTTTTTAAGTAAAACAGGTTAAACTGACCGATAAGCCGCTTTATTTTGGGTATAGCGTCGTGGACAg > 1:236147/1‑150 (MQ=11) tAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGAGGCGATGACAgg > 2:347283/1‑149 (MQ=255) aaGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCCGGTGAAACTGACCGCAAAGCCGCGTTCTTTTGGGTTTAGCGGAGTGGACCGtc > 2:3883066/1‑150 (MQ=11) aaGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAACCAGGTGAAACTGACCGATAATCCGCTTTATTTTGGGTATAGCGTAGTgggacgtc > 2:1459519/1‑144 (MQ=11) aGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTGTTGGGTATAGCGTCGTGGACAggcc > 2:2786407/1‑147 (MQ=12) aGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCCAAGCGGGGTTTTACGTAAACCAGGTGAAACTGACCCATAAGCCGCTTTCTTGTGGGGAAAGCGTCGTGGACCGtcc > 2:2423987/1‑149 (MQ=11) aGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATCTTTCTGCCCCTCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGGCGGTTTATTTTGGGTATAGCGTCggggtccggga > 2:793949/1‑143 (MQ=11) gCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTAATATTTATGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTTACCGATAAGCCGCTTTCTTTTGGGTATAGCGTAGTGGACAGtcaa > 1:2790009/1‑149 (MQ=11) cGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAAGTAAACCAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGGTATAGCGTCGTGGACAGtccttc > 2:2466600/1‑150 (MQ=255) tcttgTGGTGATCGTGTCGTGGACACTGTTTCATATTACGGGCCCTCCACAAGCATAAACCCGCCGTAGCGGTTTATTACGTACAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCtt < 2:2233077/150‑1 (MQ=11) tttGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCt < 2:1166656/150‑1 (MQ=37) tGGGTATAGTGTCGTGGACAGTCATTCATCGTTCTGCCCCTCCCAAAGCAAAAACCCGCCGAAGCGGGTTTTTTCGTTAAACAGGTGAAACTGACCGATAAGCCGCGTTGGTTTGGGGCTAGCGTCGTGGGCAGGCATTCATcggtgtgg > 1:1620276/1‑143 (MQ=11) cGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATCAACTTTCTGCCCCACCAAAAGc > 1:3070767/1‑150 (MQ=255) gTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGTCATTCAAAATTATTCACCTCCAAAAGCa > 1:925946/1‑150 (MQ=11) gTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCAGAAGCGGGTTTTTTCGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCa < 1:2391793/150‑1 (MQ=255) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGTGTATAGCGTCGTGTACAGTCATTCATCTTTAAGCCCCACCAAAAGCaaaa > 2:2085585/1‑150 (MQ=11) gACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCCAAAGCaaaa > 1:2803316/1‑150 (MQ=255) gTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAccc > 1:607798/1‑150 (MQ=37) tttcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgcc < 1:153631/149‑1 (MQ=37) tttcatCTTTATGCCACTCAAAAAGCAAAAACCCGCCGAATCGGTTTATTACGTAAACCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACccgcc < 1:697995/149‑1 (MQ=11) attcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCTTCATCATTATTCCCCACCAAAAGCAAAAACccgcc > 2:1095434/1‑150 (MQ=11) ttcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTGTAGGGTATAGCCACGAAGAAAGTCCTTCATAATAAATCACCAACAAAAGCAAAAACccgccg > 2:3107388/1‑150 (MQ=11) tcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGGCCTGCAACGTACTCCCCCACCAAAACCAAAAACCCCCCGa > 2:1209506/1‑150 (MQ=11) tcatCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCAGCCCCACCAAAATCAAAAACCCGCCGa > 2:2865840/1‑150 (MQ=255) tttCTGCCCCTCAACAATCAAAAACCCGCCGTAGCGGTTTTTTACGTAAACCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCgg < 1:3313827/150‑1 (MQ=11) ccTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTAc > 2:1754971/1‑150 (MQ=37) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTGTTTACg > 1:2445622/1‑150 (MQ=255) cTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACg > 1:1611034/1‑150 (MQ=255) aaaaGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCCTTCATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGCAGCGGGTGTTTTCGTtaa > 1:3505767/1‑150 (MQ=11) aaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa > 2:2349519/1‑150 (MQ=37) aaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGa < 2:3521341/150‑1 (MQ=37) aaaCCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTGTTTACGGAAATCAGGTGa > 2:1341887/1‑150 (MQ=255) gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGa > 2:3812763/1‑150 (MQ=37) gccgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATAATCTTTATGCCCCGCCAAAATCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAAcata > 1:2991989/1‑147 (MQ=11) cgAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGAcc > 2:400202/1‑150 (MQ=37) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCAACTTTCTGCCCCTCCAAAAGCAAAAAACCGCCCAAGCGGGTTTTTTCGTTAATCAGGTGAAACTGACCGa > 1:2650188/1‑150 (MQ=11) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTTCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGa > 2:1829405/1‑150 (MQ=37) aaGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGTAACTGACCGa > 1:2820422/1‑150 (MQ=255) aGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGAt < 1:1520134/150‑1 (MQ=37) gCGGTTTTTTACGTAAACCAGGTTAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGGGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATa < 2:1662884/150‑1 (MQ=255) cGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATaa > 2:3676124/1‑150 (MQ=37) gggTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGGTTTTACGTAAATCAGGTGAAACTGACCGATAAg > 2:78520/1‑150 (MQ=255) gTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAAACCGCCGAAGCGGGGTTTTACGTAAATAAGGTGAAAATGACCGATAAGcc > 1:2252763/1‑150 (MQ=11) ttttACGTAAAACAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCgg < 1:2863646/150‑1 (MQ=17) tttACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCggg < 2:3048058/150‑1 (MQ=18) cGTAAACCAGGTGAAACTGACCGATACGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCt < 1:4233795/150‑1 (MQ=255) gTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCCCCGAAGCGGGTTTTTACGTTGAGCAGGTGAAACTGACCGCTAAGCCGGGGTCTg > 2:2687761/1‑150 (MQ=11) tAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGt > 2:324969/1‑150 (MQ=255) aaaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCGCCAAAAGCAAAAACCCGCCGAAGCGGGTGTTTACGTAAATAAGGTGAAACTGTCCGATAAGCCGGGTTCTGTc > 2:2585378/1‑150 (MQ=255) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTAATATTTATGCCCCTCCAAAAGCAAAAAAACCCCCAAGCGGGTTTTTAAGTAAATAAGGTGTAAAAGACCGATAAGCCGGGttatttag > 1:454824/1‑144 (MQ=14) aaCCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAATCCGGGTTCTGTCg > 2:4030360/1‑150 (MQ=255) aGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGa < 1:3418635/150‑1 (MQ=255) ggTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGAc > 2:3170960/1‑150 (MQ=255) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTc < 1:245567/70‑1 (MQ=35) tGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAg > 1:1048000/1‑150 (MQ=255) gAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGt > 1:710639/1‑150 (MQ=255) tcTGACCTATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat < 1:3357853/149‑1 (MQ=255) aCTGACCTATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtcat < 1:755192/150‑1 (MQ=255) aCTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCATTCATATTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGGGAAACTGACCGATAATCCGGGGTCTGTCGTGGCCAGgcat > 2:1529123/1‑150 (MQ=14) tGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATc < 2:667875/52‑1 (MQ=35) ccGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAGTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGTTAAGCCGGGTTCTGTCGTGGACAGTCATTCATc < 2:2572103/150‑1 (MQ=255) cGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGt < 1:2476731/95‑1 (MQ=33) cGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCt > 2:2380957/1‑150 (MQ=255) gATAAGCCGCTTTCTTTTGTGTATAGTGTGGTGGTCTTTCTTTCTTATTTCTGACGCTTGCAAATCACAAACCCGCCGTAGCGGGTTTTTACGTAAATCAGGTTAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTa < 1:957680/150‑1 (MQ=17) tAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGCCAGTCAATAAAAATTATTCCCCCCCCAAAGCAAAAAACCCCCCCAGCGGGTTTTTAAGTAAAAAAAGTGAAAATGACCGAGAAGCCCGGGTCTGTCGTGGACAGTCATTAAtatatg > 1:4013268/1‑148 (MQ=9) tAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAgg < 2:1075244/150‑1 (MQ=255) tAAGCCGCTTTCTGTTGGGTATAGCGTCGTGGACAGTCCTTCATCTTTCTGCCCCGCCAAAATCAAAAACCCGCCGAAGCGGGTTGTTAAGGTCATCAGGTGAAACTGACCGAAAATCCGGGTTGTGTCGTGGTCAGTCATGCATCAAgg > 2:740964/1‑150 (MQ=17) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGACACTCAATCATCATTCAGCCCCACCAAAAGCAAAAACCCCCCCAAGCCGGTTTTTAACTAAAAAACGTGAAACACACCCAAAAGCCCGGGTCAGTCGTGGACACTCATTCATATAGGcc > 1:2258005/1‑150 (MQ=9) aGCCGCTTTCTTTTGGGTATAGCGTCGTGGAAAGTAATTAATCTTTCTGCCCCACCAAAAGCAAAAACCCCCCGAAGCGGGTTTTTACGTAAAACATGTGAAACAGACCCATAAGCCGGGTTCTGTCGTGGACAGTCATTAAACTAGGcc > 1:3952208/1‑150 (MQ=17) gCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCa < 1:545045/150‑1 (MQ=255) ccGCTTTCTTTTGGGTATAGCGTCGTGGCAAGTCATTAATCTTTCTGCCCCACCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTTGACAGTCATTCATCTAGGCCAg > 1:2353733/1‑150 (MQ=17) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAg < 2:1484624/150‑1 (MQ=255) ccGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCAATAATATTTCTGCCCCTCCAAAAGCAAAAACCCCCCCAAGCGGGTTTTTACGTAAATCAGGTGAAACAGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCAg > 1:2353758/1‑150 (MQ=18) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCa > 1:1391473/1‑150 (MQ=255) gCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAAACCGCCGAAGCGGGTTTTTAAGTAAATCAGGTGAAACTGACCGATAATCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCa > 1:2035508/1‑150 (MQ=255) ctttctttTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGTAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGtca > 2:3809562/1‑133 (MQ=255) tttctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGGTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAAt > 2:4265562/1‑150 (MQ=255) ttctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 1:2655215/150‑1 (MQ=255) ttcttgTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCACAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATc < 1:650369/150‑1 (MQ=255) tctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCg < 1:222355/150‑1 (MQ=255) ctttTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGc > 2:1203874/1‑150 (MQ=255) tttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTc > 2:2535211/1‑150 (MQ=255) ttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCa > 2:1980164/1‑150 (MQ=255) ttGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATAAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCCTTCATCTAGGCCAGCAATCGCTcc > 2:2724091/1‑149 (MQ=255) tGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTg > 2:55367/1‑117 (MQ=255) ggTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAAACAGGTGAAAATGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTAATCTAGGCCAGCAATCGCTCACTg > 2:1576723/1‑150 (MQ=255) gTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAATAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTTACCGATAAGCCGGGGTCTGTCGTGGACAGTCATTCATCTAGGCCAGCCATCGCTCACTgg > 2:2899050/1‑150 (MQ=255) tataGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGc > 2:2198061/1‑150 (MQ=255) ataGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAATCCGGGTTCTGTCGTGGACAGTCATTCATATAGGCCAGCAATCGCTCACTGGCt > 2:382804/1‑150 (MQ=255) ataGAGACGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCt < 1:732954/150‑1 (MQ=255) taGCGTCGTGGACAGTCATTCATCTTTATGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTc > 1:3507186/1‑150 (MQ=255) aGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCa < 1:3749077/150‑1 (MQ=255) tcgtcgtGTGCAGTCATTCATCTTTCTGCCACTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCaa < 1:869039/149‑1 (MQ=255) | GAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGTGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAACCAGGTGAAACTGACCGATAAGCCGCTTTCTTTTGGGTATAGCGTCGTGGACAGTCATTCATCTTTCTGCCCCTCCAAAAGCAAAAACCCGCCGAAGCGGGTTTTTACGTAAATCAGGTGAAACTGACCGATAAGCCGGGTTCTGTCGTGGACAGTCATTCATCTAGGCCAGCAATCGCTCACTGGCTCAA > CP009273/3263353‑3263650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |