| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,779,281 | C→G | 8.1% | A221G (GCT→GGT) | gpmM → | phosphoglycero mutase III, cofactor‑independent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,779,281 | 0 | C | G | 8.1% | 584.0 / 6.7 | 209 | A221G (GCT→GGT) | gpmM | phosphoglycero mutase III, cofactor‑independent |
| Reads supporting (aligned to +/- strand): ref base C (106/82); new base G (4/9); total (110/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.82e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
AAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAAT > CP009273/3779133‑3779428 | aaaTTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCt > 1:1440529/1‑150 (MQ=255) tttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGt > 2:3897245/1‑150 (MQ=255) ttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGtt > 1:113811/1‑150 (MQ=255) ttGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGtt < 2:1013034/150‑1 (MQ=255) tGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGttt > 1:2128686/1‑150 (MQ=255) gCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTg < 1:628317/150‑1 (MQ=255) cgcgCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCa < 2:916992/150‑1 (MQ=255) cTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgct < 1:3173063/150‑1 (MQ=255) tGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctg > 2:2529729/1‑150 (MQ=255) gggCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctgc > 1:1164287/1‑150 (MQ=255) gggCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGgctgc < 2:3195560/150‑1 (MQ=255) cAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTa < 1:2890853/150‑1 (MQ=255) aaaGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAt < 1:3269349/150‑1 (MQ=255) aaaGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGGTTGCAGGCTGCGTAt > 1:1565636/1‑150 (MQ=255) aGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGc < 1:814390/150‑1 (MQ=255) ggCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTTCACGCTGCGTaatcg > 1:1103163/1‑146 (MQ=255) ggCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTGGCGGGTTGGCAGGCGGCGTATGcg > 1:1103127/1‑149 (MQ=255) gTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGcgac > 2:3609380/1‑150 (MQ=255) tAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGcgacg < 1:826063/150‑1 (MQ=255) aGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGcgacga < 2:1779308/150‑1 (MQ=255) cGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGaaa < 2:4165606/150‑1 (MQ=255) gTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGaaaa < 2:2475424/150‑1 (MQ=255) ccATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAatg > 1:667378/1‑150 (MQ=255) catcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAatga > 2:488129/1‑150 (MQ=255) tcatTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAatgatg < 1:601579/150‑1 (MQ=255) atTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTTCAGGCTGCGTATTCTCGCGACGAAAATGATGaa > 1:4053171/1‑150 (MQ=255) atTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGACAATGATGaa > 1:2421923/1‑150 (MQ=255) atTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCAGGTTTGCATGCTGCTTATGCTCGCGACGAAAATGATTaa > 2:1323431/1‑150 (MQ=255) ttGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAt < 2:2748091/150‑1 (MQ=255) ggTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTc < 1:1438745/150‑1 (MQ=255) tCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGt < 1:3007827/150‑1 (MQ=255) gTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGa > 2:2882024/1‑150 (MQ=255) gTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTAGTGa > 1:873828/1‑150 (MQ=255) ttACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGaa > 2:1478994/1‑150 (MQ=255) tactacGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGaaa < 2:503684/150‑1 (MQ=255) ctacGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATTCTCGCGACGAAAATGATGAATTCGTGAAAGc > 1:805891/1‑150 (MQ=255) tacGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCg < 1:2764692/150‑1 (MQ=255) ggACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGGTAt > 1:3412468/1‑150 (MQ=255) aCCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATcc > 2:1716041/1‑150 (MQ=255) ccGCTATAA‑CGTTGGGTATCGCGTATAAATAGCTTATGACCTGATGACTCGGGGGCTGGGCGTGTTCCAGGCGTATACCGCGTTTGGTGGTTTGCTGGGTGCTTTTGCTCGCGACTAAATTGTTTAATTCTTGAAAGCGACCGTTATCCg < 2:778838/150‑1 (MQ=255) cgATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGc > 2:1904651/1‑150 (MQ=255) gATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCt > 1:1332837/1‑150 (MQ=255) aTAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATACGTGCTg > 2:3558279/1‑150 (MQ=255) aacgtttGGG‑ATCGCTTTGAAAAAGCTTTTGACCTGCTGACTCGGGCGCTGGGCTAGTTCCCGGCCTATCCCGCGGTTGCTGGTTTTCAGGCTGATTTTGCTCGCGACTAAAATGATTAATTCGTGAAAGCGACCGTTATCCGTGCTGaa < 1:1760465/145‑1 (MQ=255) aaCCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGGTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATTATGAATTCGTGAAATCGACCGTTATCCGTGCTGaa > 1:2224472/1‑150 (MQ=255) ccggTTGGG‑ATCGCGTATAAAAAGCTTATGCCCTGCTGACTCGGGCGCCGGGCGTGTTCCCGGCCGATCCCGCGGTTGCTGGTTTGCAGGGTGCTTATGCTCGCGACTAAATTTATGAATTCGTTAAAGCGACCGTTATCCGTGCTGAAg < 2:2947426/147‑1 (MQ=255) aCCGTTGGT‑ATCGCGTAGAAAAAGCTTATGACGTGCTGACTCTGGCGCTGGGCTAGTTCCAGGCCGATACCGCGGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTTAAAGCGACCGTTATCCGTGCTGAAg < 2:2556824/150‑1 (MQ=255) gtgggg‑ATCGCGTATAAAACGGTTTTGACCTGCGGACTCGGGCGCTGGGCGTGTTCCCGGCCGATACCGCCGTTGCGGGTTTGCTGGCTGCTTAGGCTCGCGACGAAAATTATGAATTGGTGAAAGCGACCGTTATCCGTGCTGAAGGTc < 1:3241904/147‑1 (MQ=255) ttGGG‑ATCGCTTAGAAAATGATTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCTGGCTGCTTATGCACGCGACTAAAATGATTATTTCGTTAACGCGACCGTTATCCGTGCTGAAGGTCa < 1:2447340/150‑1 (MQ=255) tGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACTAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAg < 2:225078/150‑1 (MQ=255) tGGG‑ATCGCGTAGAAAAAGCTGATGACCTGCTGACTCTGGCGCTGGGCGAGTTCCCGGCCGATCCCGCGGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGCCGAAAATGATGAATTGGTGAACGCGACCGTTATCCGTGCTGAAGGTCAg < 2:2402119/150‑1 (MQ=255) ggg‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGc > 2:3409976/1‑150 (MQ=255) aTCGCTTATAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCTGGCCTATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATTATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAg < 2:1600475/150‑1 (MQ=255) cgcgTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGTTTTGCAGGCTGCTTATGCTCGCGACTAAAATGATGATTTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGAc < 2:2237267/150‑1 (MQ=255) gcgTAGAAACCGCTTAGGACCTGCTGACTCGGGCGCCGGGCGAGTTCCCGGCCTATACCGCGGTTGGTGGTTTGCAGGGTGCTTATGCTCGCGACGAAAATGATGAATTGGTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGAcg < 2:3292813/150‑1 (MQ=255) aaaaGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTCCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACTAAAATTATGATTTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAAt < 2:4042071/150‑1 (MQ=255) aGCTTATGACGTGCTGACTCTGGCGCTGGGCGTGTTCCCGGCCTATCCCGCGGTTGTGGTTTTGCCGGCTGCTTATGCTCGCCACGAAAATTATTAATTCGTCAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGa < 1:2700502/150‑1 (MQ=255) gtttATGACCTGCGGACTCTGGCGCTGGGCGTGTTCCAGGCCGTTACCGCCGTTGCTGGTTTGCTGGCTGCTTATGCTCGCGACGAAATTTATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGaa < 1:334224/148‑1 (MQ=255) ttattaCCTGCTGTCTCTGGCGCTGGGCGATTTCCTGGCCTATACCGCTTTTGCTGGTTTGATGTTTGCTTTTGCTCGCGACTAAATTTTTGAATTCTTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGa < 1:220460/150‑1 (MQ=255) ttATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATTCTCGCGACGAAAATTATGAATTCGTGAAAGCGACCGTTATACGTGCTGAAGGTCAGCCAGACGCGGCACAGGAAGa > 1:435708/1‑150 (MQ=255) ttATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGa > 2:3169226/1‑150 (MQ=255) aCCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCg > 2:1054661/1‑150 (MQ=255) gtgctgACTGGGGCGCTGGGGGTGTTCCTGGCGGATCCCGCGGTGGCTGGTTTGCAGGGTGATTTGGCTCGCGACTAAATTGTTGAATTGGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGAt < 1:3889816/149‑1 (MQ=255) ctgctgACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGTTGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGAt > 1:4147384/1‑150 (MQ=255) tgACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTTCAGGCTGCTTTTTCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGGTATCCGTGCGGAAGGTCAGCCAGCCGCGGCAATGGAAGACCGCGATGCAc > 1:3031960/1‑150 (MQ=255) aCTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGCTGCACTg > 1:1951082/1‑150 (MQ=255) aCTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTg < 2:1055825/150‑1 (MQ=255) aCTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTGGCTGGTTTTGAGGGGGCGTATGCTCGCGCCGCAAATTATGACTTAGTGAAAGCCACCCGTATCCGTGCGGAAGGTCCGCCCCACGCGGCCAAGGAAGACCGCGATGCACTg > 1:4078845/1‑150 (MQ=255) ctctGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGa > 2:4352969/1‑150 (MQ=255) ctctGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCCGACCCGGCAATGGAAGACGGCGATGCACTGa > 1:494790/1‑150 (MQ=255) ggCGCTGGGCTAGTTCCAGGCCGATACCGCCGTTGATGTTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGAtttt < 2:517747/150‑1 (MQ=255) ggCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGAtttt > 2:3173346/1‑150 (MQ=255) cAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATg < 2:1252201/150‑1 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGGGGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGGTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGa > 2:770476/1‑150 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTTCAGGCAGCTTATGCTCGCGACGAAAATGATGAATTAGTGAAAGCGACCCTTATACGTGCTGAAGGTCAGCCCGACGCGGCAAAGGAAGAAGGCGATGCACAGATTTTAAtta > 1:2330736/1‑148 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGTAGGTCAGCCAGACGCGGCCATGGAAGACGGCGATGCACTGATTTTCATGa > 1:121093/1‑150 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGa > 2:118525/1‑150 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACGTATTTTAATGa > 1:2782883/1‑150 (MQ=255) aGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAAATCGTGAAAGCGACCCTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATTCACTGATTTTAATGa > 1:2782917/1‑150 (MQ=255) ggCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAAc > 2:984893/1‑150 (MQ=255) gggAGTTCCTGGCCGTTCCCGCCGTTTGTGGTTTGCAGGCTGATTTTGGTCGCGATTAAATTGATTAATTGTTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGTCGGCGATGCACTGATTTTCATGAACt < 1:3084651/148‑1 (MQ=255) gCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCCGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACt > 2:1561030/1‑150 (MQ=255) gCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTAGGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACt < 2:1440529/150‑1 (MQ=255) cttgTTCCAGGCCGATCCCGCGGTTGGTGTTTTGCTGGCTTCTTATGCTCGCGACGAAATTTTTGAATGCGTGAACGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACtt < 2:3312227/147‑1 (MQ=255) gTTCCAGGCCTATACCGCGGTTGGTGGTTTGCAGGCTGCTTATGCTCGCGACTAAATTTATTATTTCGTTAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCg < 1:1637666/150‑1 (MQ=255) gTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACGGATTTTCATGAACTTCCg > 2:3044108/1‑150 (MQ=255) ttCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGt > 2:1590806/1‑150 (MQ=255) ccAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGc > 2:267816/1‑150 (MQ=255) cAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCGTATTCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCCTGCTGAATGTCAGCCACACGCGGCAATGGAAGACGGCGATGCACAGATTTTCATTAACATCCGTGCt > 1:3826332/1‑150 (MQ=255) tggCCTATACCGGCGTTGTTGGTTGGCTGGGTGCTTATGCTCGCGACTAAATTTTTTAATTCTTCAACGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTg < 1:2955139/149‑1 (MQ=255) aGGCCGATACCGCCGTTGCTGGTTTTCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTAGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTg > 1:100871/1‑150 (MQ=255) aGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTg > 2:2440804/1‑150 (MQ=255) gCCGATCCCGCCGTTGCTGGTTTGCAGGCTGCTTAGGCTCGCGACGAAAATGATGAATGCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGAc < 2:1906797/150‑1 (MQ=255) gATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAATCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACcgc > 2:36253/1‑150 (MQ=255) aTACCGCCGTTGCTGTTTTGCTGGCTGATTATGCTCGCGACGAAAATTATTAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACcgcg < 2:113811/150‑1 (MQ=255) aTACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACcgcg > 2:2796010/1‑150 (MQ=255) gccgTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGt > 1:1559138/1‑150 (MQ=255) ggTTGCTGGTTTGCTGGCGGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGa < 2:4129948/149‑1 (MQ=255) ttGCTGGTTGGCTGGGTGGTTTTGCTCGCGACGAAATTGTTGATTTCGTGAACGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGaaa < 2:3283810/150‑1 (MQ=255) tGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATTATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAAt < 1:3609380/150‑1 (MQ=255) | AAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGG‑ATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAAT > CP009273/3779133‑3779428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |