| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,860,159 | C→A | 100% | P33P (CCG→CCT) | ibpB ← | heat shock chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,860,159 | 0 | C | A | 95.9% | 628.7 / 16.3 | 234 | P33P (CCG→CCT) | ibpB | heat shock chaperone |
| Reads supporting (aligned to +/- strand): ref base C (4/7); new base A (85/131); total (96/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 237 total aligned reads displayed.
TTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGA > CP009273/3860013‑3860305 | tttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCACTTGTTTACGGAggg > 1:3804299/1‑150 (MQ=255) ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTAAATTTTGTTCGGAgggt > 1:1980097/1‑149 (MQ=255) ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGa < 1:101434/150‑1 (MQ=255) ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGa < 1:2276840/150‑1 (MQ=255) ttttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGa < 1:500015/150‑1 (MQ=255) ttCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAg < 1:1282057/150‑1 (MQ=255) ctctTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGct < 2:1372236/150‑1 (MQ=255) cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTTAGGAGGGTAGctct > 2:2014229/1‑150 (MQ=255) cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGctct < 1:2836184/150‑1 (MQ=255) cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTTAGGAGGGAAGctca > 1:1607936/1‑149 (MQ=255) cttcttTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTGTCAATGTTTTTAGGAGGGGAGctgt > 1:3654022/1‑148 (MQ=255) ttttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCt < 2:3255162/150‑1 (MQ=255) tttGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCtt < 1:1822729/150‑1 (MQ=255) tGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCCATGTTGTTCGGAGGGTAGCTCTGGGTTTc > 1:277044/1‑150 (MQ=255) tGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTc < 1:738895/150‑1 (MQ=255) tGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTc > 2:4135440/1‑150 (MQ=255) gctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTATGAATGTTTTTCGGTGGGGAGCTCTGGGTGTCAc > 1:3391593/1‑150 (MQ=255) ctgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAAAGTTGTACGGAGGGAATCTCTGGCTTTCaac > 2:2910249/1‑148 (MQ=255) tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCg > 2:2468905/1‑150 (MQ=255) tgctCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACCGAGGGAAGCTCTGGCGTTCAccc > 2:1238915/1‑149 (MQ=255) tCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCg > 2:145889/1‑150 (MQ=255) tCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCTCTGGCTTTCACCcgcg > 2:3017565/1‑150 (MQ=255) ccGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGt < 2:3729655/150‑1 (MQ=255) cGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTGAATGTTGTACGGAGGGTAGCTCTGGCTTTCACCGGCGTTTTg > 2:1297078/1‑150 (MQ=255) cGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTg < 1:1535143/150‑1 (MQ=255) gTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCCATGTTGTAAGGCGGGACGCACTGGCTTTCACCGGCGTTTTGc > 2:3632841/1‑150 (MQ=255) gCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTGTGCAAGTTGTAAGGAGGGAAGCTCTGGGGTTCACCGGCGGTTTGGA‑g > 2:767465/1‑150 (MQ=255) ccTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAAGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTTCA‑Gt > 2:3752818/1‑150 (MQ=255) cTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTAACCGGCGTTTTGCA‑GTg > 2:1727216/1‑150 (MQ=255) tttACGCTCAGGCGCGGACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑g < 1:396120/150‑1 (MQ=255) ttACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCGCCATGTTGTACGGAGGGAAGCGCTGGCTTTCACCGGCGGTTTGCA‑GTGC‑gg > 2:255493/1‑149 (MQ=255) tACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑Gtt < 2:4079747/150‑1 (MQ=255) tACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑Gtt < 1:2262581/150‑1 (MQ=255) aCGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTg < 2:1564633/150‑1 (MQ=255) aCGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCGCTGGCTTTCACCGGCGGTTTGCA‑GTGC‑Gttt > 2:3244181/1‑149 (MQ=255) aCGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTg > 2:1052121/1‑150 (MQ=255) cTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTAAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTTCA‑GTGC‑Gtttggc > 2:2277188/1‑146 (MQ=255) tCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCa < 2:3397210/150‑1 (MQ=255) cAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAg < 2:3055965/150‑1 (MQ=255) aGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTGTGAATTTTTTACGGAGGGTAGCTCTGGCTTTCAACGGCGGTTTTGA‑GTGC‑GGTGGGCAgg > 1:891999/1‑149 (MQ=255) gcgcGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTATACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGttt < 1:780330/150‑1 (MQ=255) cgcgTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTg < 2:218860/150‑1 (MQ=255) ttCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAAcc < 2:1620037/150‑1 (MQ=255) tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCg < 2:3557390/150‑1 (MQ=255) tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTTTGAATGTTTTTAGGCGGGGAACGCTGGCTTTAAACCGCGGTTTTCAGGTGG‑TTTGGCCGGTTTTTAAAAAcc > 1:1878712/1‑150 (MQ=255) tCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTAAATTTTGTAAGGAGGGAAGCTCTGGCTTTCACCGGCGTGTTGCA‑GTGC‑GTTGGCCAATTTTTAAAAAACg > 2:1735870/1‑150 (MQ=255) cAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAAATGTGTACGGAGGGTAGCTAATGCGTTGAAAGGCGGTTTGAA‑GTTC‑GGTGGCCAGTTTTTCAAAAACGAt > 2:528828/1‑150 (MQ=255) aGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCGCTGGCTTTGAACGGCCGGTTTCA‑GTGC‑GGTGGCCCGGTTGTCAAAAcccaaa > 1:2744699/1‑146 (MQ=255) gTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTTTACGGAGGGAAGCTCTGGCTTTAACCGGCGTTTTGCA‑GTGC‑GGTGGCCAGTTTGTCAAAACCGATcc > 2:459493/1‑150 (MQ=255) tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCAt < 1:3881631/150‑1 (MQ=255) tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCAt < 1:3337939/150‑1 (MQ=255) tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCAt < 1:323798/150‑1 (MQ=255) tGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTAAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTTCA‑GTGC‑GTTTGCCCGTTTGTCAAAACccatccat > 2:4049230/1‑150 (MQ=255) ctAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCACTGGGTTTCACCGGCGGTTTGCA‑GGGC‑GGTGGGCACTTTTTCAAAAACCATCCCATGTCGCa > 1:3503934/1‑150 (MQ=255) tAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCAt < 1:992057/150‑1 (MQ=255) tAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAAGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GGTGGCCAGTTTTTCAAAAACGATCCAATGACGCaa > 2:3851615/1‑149 (MQ=255) aaaTCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAAGGTTGTACGGAGGGAAGCTCTGGCGTTCACCGGCGGTTTGCA‑GTGCGGTGGGCCGGTTTG‑CAAAACCCATCCCTTGACGCATc > 2:828008/1‑150 (MQ=255) cTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTg < 2:4206721/150‑1 (MQ=255) cTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTg < 2:2150676/150‑1 (MQ=255) cTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATGAATGTTGTAAGGAGGGGAGCTCTGGGTTTCACCGGCGGTTTTAA‑GTTC‑GGTGGCCAGTTTGTCAAAAACGATACCATGAAGCAACAGTg > 1:1051166/1‑150 (MQ=255) tGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGAt < 1:2562978/150‑1 (MQ=255) gACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATa < 1:3091296/150‑1 (MQ=255) aaCCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTAACGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCCATACATTGACGCATAAGTGGGGATAAATAGa > 2:3122421/1‑150 (MQ=255) gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTa < 2:3301492/150‑1 (MQ=255) gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTa < 2:3213994/150‑1 (MQ=255) gCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCACTGGCGTTAAACCGCGGTTTGCA‑GTTC‑GGTGGCCCGTTTGTGAAAAACCATACAATGACGCATCAGTGGGGATCAATcctattta > 2:2757038/1‑143 (MQ=255) ccAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGGAGCTCTGGCTTTGACCGGCGGTTTGCA‑GTGC‑GGTTGGCAGTTTTTCAAAACCGATACATTGAAGCATCACTGGGGATAAATAGAAGTTAc > 1:2438682/1‑150 (MQ=255) cAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACg < 1:1143894/150‑1 (MQ=255) cAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACg < 1:1578118/150‑1 (MQ=255) cgcAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCAt < 2:1511029/150‑1 (MQ=255) cAAGGGTAATGCGGTAGTGGTTATCGTCGCGTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCCGCGTTTTTCA‑GTGC‑GTTTGCCAGTTTGTCAAAACCGATCCAATGAAGCAAAAGTGGGGGTAAAACGAAGTTAAGCATAg > 2:578251/1‑150 (MQ=255) aaGGGTAATGCGGTAGTGGTTATCGTCGCTTTTATCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTTCA‑GTGC‑GTTGGCCCGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATAGAAGTTAAGCATatt > 2:2814735/1‑148 (MQ=255) gggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCa < 1:1334966/150‑1 (MQ=255) ggTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCAt < 1:2460383/150‑1 (MQ=255) gTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCAtt < 1:1629989/150‑1 (MQ=255) aTGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTtct < 1:295765/150‑1 (MQ=255) aTGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTtct < 1:2469032/150‑1 (MQ=255) gCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTcc < 2:1420141/150‑1 (MQ=255) tGGTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaag < 2:3269620/150‑1 (MQ=255) gTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaagaa < 1:825427/150‑1 (MQ=255) gTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaagaa < 1:2277188/150‑1 (MQ=255) gTTATCGTCGCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTaagaa < 1:825731/150‑1 (MQ=255) tcgtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCCATCCATTGACGCATCAGTGGGGATAAATCGAAGTTAAGCATAGTCATTTCTCCTTCTAAGTAGCGa > 2:1214330/1‑150 (MQ=255) gtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagt < 1:3601413/150‑1 (MQ=255) gtcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagt < 2:2294823/150‑1 (MQ=255) tcgCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagta < 2:3587467/150‑1 (MQ=255) gCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaag < 1:1655419/150‑1 (MQ=255) gCTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaag > 1:3976297/1‑150 (MQ=255) cTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaagt < 1:4046303/150‑1 (MQ=255) cTTTTCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGagtaagt < 1:2225015/150‑1 (MQ=255) tttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTAc > 2:4113893/1‑150 (MQ=255) ttCTCAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTAcc < 1:4239646/150‑1 (MQ=255) ctcAATGGTGTACGGAGGGAATCTCTGGCTTTCAGCGGGGTTTTGAA‑GTGC‑GTTGGCCAGTTGGTCATAAGCGATCCATTGACGCATCAGTGGGGTTAAATCGACGTTACGCATAGTTATTTATCCTTCTTTGAAGCGAGTAAGTActtt < 1:1442216/150‑4 (MQ=255) cAATGTTGTACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCa < 1:1458636/150‑1 (MQ=255) tgttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAAt < 1:1105005/150‑1 (MQ=255) gttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAATCGAGTAAGTACCTGCAAATc > 2:1323466/1‑150 (MQ=255) gttgtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATc > 1:1781118/1‑150 (MQ=255) gtACGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAAACCGa > 2:3891927/1‑150 (MQ=255) aCGGAGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAg < 2:3804325/150‑1 (MQ=255) cggaggGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGa < 1:301719/150‑1 (MQ=255) | TTTTTCTCTTCTTTTGGCTGCTCCGGCGTGCCTTTTACGCTCAGGCGCGTACCTTCCAGTTGAATCTCTAAATCTTCCTGACGGAAACCTGCCAGCGCAAGGGTAATGCGGTAGTGGTTATCGTCGCTTTTCTCAATGTTGTACGGCGGGAAGCTCTGGCTTTCACCGGCGTTTTGCA‑GTGC‑GTTGGCCAGTTTGTCAAAACCGATCCATTGACGCATCAGTGGGGATAAATCGAAGTTACGCATAGTCATTTCTCCTTCTAAGAAGCGAGTAAGTACCTGCAAATCCGAAGA > CP009273/3860013‑3860305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |