| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,896,189 | G→T | 31.8% | T291T (ACC→ACA) | bglB ← | cryptic phospho‑beta‑glucosidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,896,189 | 0 | G | T | 31.8% | 369.5 / 187.3 | 216 | T291T (ACC→ACA) | bglB | cryptic phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base G (96/51); new base T (50/19); total (146/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 222 total aligned reads displayed.
CAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896041‑3896338 | cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 1:4236962/1‑150 (MQ=255)cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 1:3007098/1‑150 (MQ=255)cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 2:406592/1‑150 (MQ=255) aaCCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGt > 2:4355241/1‑150 (MQ=255) ggATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGt > 2:650363/1‑150 (MQ=255) cAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTa > 1:1072778/1‑150 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTaa > 1:1683355/1‑150 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 1:735443/1‑150 (MQ=255) tttGCCACCCCCACTCTGAACTTTTCTGTTG‑GGTTGGGGGTATCATTTTCTTTTTGTTGCCCGGCGATTTTTTTTTAATGATTTCTTCGTGTTAAACACACCCATTATTTTAAAAAATAAAACCTTTTAAATCGACTGTATGTTTTAAAt < 2:3319138/150‑1 (MQ=255) tttGCCACCCCCACGCTGAACTTTTCAGATGCGGATTGGGG‑ATCTTATTCAGTAGGTGGCCCTGCGCTTTTTTTTTAATGCTTTCGTCGGGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAt < 2:1017832/150‑1 (MQ=255) ccACCCCCCCACTGAAATTTTCAGATGCGGATTGGGG‑ATCATATACATTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTGGTGGGAAACACACCCAGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttc < 2:1998764/150‑1 (MQ=255) ccACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttc > 1:2725098/1‑150 (MQ=255) ctctGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACt > 1:66478/1‑150 (MQ=255) tGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTc > 2:2160364/1‑150 (MQ=255) gAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTTCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACAAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCa > 2:3763738/1‑150 (MQ=255) gAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCa > 1:2359389/1‑150 (MQ=255) cAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCAtctc > 1:1360864/1‑150 (MQ=255) tttGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCACTAATTTAATAAATAAAATATATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCaa < 2:490295/148‑1 (MQ=255) aTGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAAt > 2:3778200/1‑150 (MQ=255) aTGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAAt > 1:1329388/1‑150 (MQ=255) ggcgttttGGGG‑ATCATTTTCTGTTTGTTGCCCTGCTATTTTTTTTTAATGATTTCGAGTTGGTAAACACAACCAGTCTTTTAATAACTAAATGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCCCAATg < 2:4019632/144‑1 (MQ=255) ggATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg > 1:1539278/1‑150 (MQ=255) ttGGGG‑ATCATATTATGTTTTTTGCCCTGGGATTTTTTATTAATGCTTTGGTCGTGGGAAACACAACCAGTCTTGTAATAACTAAAAGATTTGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGata < 2:2064207/150‑1 (MQ=255) tGGGT‑ATCATTTTCTTTTTTTTGCCCTGCTCTTTTTTTTTATTGTTTTGTTCGTGTGAAAAACAACCTTTATTTTAATAAATAAAAGATTTCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGatat < 1:18020/150‑1 (MQ=255) tGGGG‑ATTTTATTCTGTTTGTGGCCCTGCGCATTTTTATTATTGCTTTCGTGGTGGTAAACACAACCAGTCATGTAATACATAAACGTTTTGAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGatat < 2:3881317/150‑1 (MQ=255) tGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGatat > 2:2355588/1‑150 (MQ=255) ggg‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATtg > 2:3163862/1‑150 (MQ=255) g‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATtgtg > 2:2040552/1‑150 (MQ=255) atattatTCAGTTTGTGGCCCTGCGATTTTTTTTTAATGCTTTCGTCGTGTCAAACACAACAATTCTTTTAATAACTAAAAGATATCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTgg < 2:1444581/146‑1 (MQ=255) tCATATTCTGTATTTTGCCCTGCGATTTTTTATTAATGCTTTCGTCGTGGTAAACCCAACCTGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGt < 2:1682689/150‑1 (MQ=255) atatTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcg > 1:2098001/1‑150 (MQ=255) atTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcgcg > 2:1561144/1‑150 (MQ=255) ttCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCgg > 2:1263211/1‑150 (MQ=255) tctgTATGTTGCCCTGCGATTTTTTTTTAATGCTTTCGTCGTGGTAAAAACAACCCGTCATTTAATAACAAAAATAGATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGga < 1:2383490/147‑1 (MQ=255) tCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGga > 2:2603878/1‑150 (MQ=255) tCAGTATGTTGCCCTGCGCATTTTTATTAATGATTTCTTCGTGGTAAACACACCCATTCATTTAATAACTAAAAGATATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGga < 2:3984224/150‑1 (MQ=255) cAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaa > 1:3285747/1‑150 (MQ=255) gTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaaga > 1:3098662/1‑150 (MQ=255) tttGTTGCCCTGCTCTTTTTTATTAATTCTTTGGTGGTGTTAAACACAACCTTTATTTTAAAAAAAAAAAGATATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaagaa < 1:2657466/148‑1 (MQ=255) ttgtGCCCTGCGAATTTTTATTATTGCTTTCGTCGTGTTAAACACAACCATTCATGTAATAACTAAAATAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 1:2445377/147‑1 (MQ=255) tGTTGCCCGGCGATTTTTTTTTAATGCTTTCGTCTTGGTAAACACACCCCGTCTTTTATTAAATAAAATATATTAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 2:1737705/150‑1 (MQ=255) tGTTGCCCGGCGATTTTTTATTAATGCTTTCGTCGTGGTAAACACAACCATTCATTTAATAACTAAAATATATTAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 2:1738044/150‑1 (MQ=255) cccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGc > 1:4101065/1‑150 (MQ=255) ccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa > 2:29257/1‑150 (MQ=255) ccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa > 2:3630114/1‑150 (MQ=255) cTGCGATTTTTTATTATTGATTTCGTCGTGTTAAACACAACCATTCATTTAATAACTAAAAGATATGAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCat < 2:3144098/150‑1 (MQ=255) tGCGCATTTTTATTAATGGTTTCGTCGTGGGAAACACAACCAGACATGTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCata < 2:2471854/150‑1 (MQ=255) tGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCata > 2:1231086/1‑150 (MQ=255) tGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCata > 2:185605/1‑150 (MQ=255) gctatttttttttATTGCTTTCGTGGTGGTAAACACAACCACTAATTTAAAAACAAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCatat < 2:759591/145‑1 (MQ=255) cttttttATTATGGTTTTCTTCGTGTGAAAAACAACCATTCATTAAATAAATAAATGAGTTCAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGc < 1:905677/148‑1 (MQ=255) ttattaTTGTTTTCTTCGTGGTAAACACAACCATTAATTTAATAAATAAAATAGATCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGa < 2:3649159/150‑1 (MQ=255) attaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATa > 2:3289079/1‑150 (MQ=255) attaATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGAGATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATa > 1:3900922/1‑150 (MQ=255) aaTGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTg > 1:3427931/1‑150 (MQ=255) aaTGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTg > 1:1231553/1‑150 (MQ=255) tGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGc > 1:684994/1‑150 (MQ=255) tGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGc > 2:1053619/1‑150 (MQ=255) cTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCa > 1:3125916/1‑150 (MQ=255) tttCGTCGTGGTAAACACAACCAGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATATTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAc < 2:239285/150‑1 (MQ=255) ttCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcg > 2:150396/1‑150 (MQ=255) tcgtcgTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcgc > 1:3073360/1‑150 (MQ=255) cgtcgtGGGAAACACACCCCGTCATGTAATAACTACAATAGTGGAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcgcg < 2:4091291/150‑1 (MQ=255) gtcgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACgcgc > 1:1207714/1‑150 (MQ=255) cgtGGTAAACACAACCATTAATGTAATACCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt < 2:126726/150‑1 (MQ=255) cgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt > 1:1408590/1‑150 (MQ=255) gtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTg > 1:2822037/1‑150 (MQ=255) tGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGACGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGa > 2:352255/1‑150 (MQ=255) tGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGa > 2:69235/1‑150 (MQ=255) acacAACCTGTATTTTAATAAATAAAAGATATTAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCa < 1:1715510/150‑1 (MQ=255) cacaACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCAc > 2:4285342/1‑150 (MQ=255) cacaACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCAc > 2:910415/1‑150 (MQ=255) acaACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCAcc > 1:4280908/1‑150 (MQ=255) aaCCAGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaa < 1:2530758/150‑1 (MQ=255) aCCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaaa > 1:2183393/1‑150 (MQ=255) cAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGa > 2:1669618/1‑150 (MQ=255) cATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACAt > 1:431201/1‑150 (MQ=255) aTGTAATAACTAAAAGATATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATc < 2:3053454/150‑1 (MQ=255) tGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATcc > 2:3438057/1‑150 (MQ=255) ttaataaATAAATTAGATCAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCa < 1:3356097/149‑1 (MQ=255) gTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCa > 2:2736748/1‑150 (MQ=255) taataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAg > 2:3412134/1‑150 (MQ=255) aataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAgc > 1:365137/1‑150 (MQ=255) ataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAgcg > 2:4172398/1‑150 (MQ=255) taaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAgcgc > 1:2769306/1‑150 (MQ=255) aaCTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGcc > 1:458233/1‑150 (MQ=255) aCTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCg > 2:3739403/1‑150 (MQ=255) tAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGt > 2:4334514/1‑150 (MQ=255) tAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTACAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGt > 1:2157647/1‑150 (MQ=255) tAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGt > 1:631238/1‑150 (MQ=255) aaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtct > 2:812931/1‑150 (MQ=255) gagaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTctct > 1:3581766/1‑150 (MQ=255) gaTGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTc > 2:1165096/1‑150 (MQ=255) gaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTc > 2:210080/1‑150 (MQ=255) aaaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATg < 2:4236962/150‑1 (MQ=255) aaaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATg > 2:2048946/1‑150 (MQ=255) aaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATgg > 1:3187990/1‑150 (MQ=255) aaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATgg > 1:1051523/1‑150 (MQ=255) gACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTg < 1:434083/150‑1 (MQ=255) ggTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCaa > 2:4184220/1‑150 (MQ=255) | CAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGG‑ATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896041‑3896338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |