| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,914,395 | T→A | 20.1% | Q52L (CAG→CTG) | atpE ← | F0 sector of membrane‑bound ATP synthase, subunit c |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,914,395 | 0 | T | A | 20.1% | 585.6 / 141.9 | 234 | Q52L (CAG→CTG) | atpE | F0 sector of membrane‑bound ATP synthase, subunit c |
| Reads supporting (aligned to +/- strand): ref base T (128/59); new base A (27/20); total (155/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
CACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTCAGGT > CP009273/3914246‑3914542 | aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTCAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAg < 2:1736107/150‑1 (MQ=255) aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAg < 2:1752842/150‑1 (MQ=255) gCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGt < 1:3873703/150‑1 (MQ=255) acaATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTAc > 2:2918869/1‑150 (MQ=255) aaTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgc > 2:1892079/1‑150 (MQ=255) ccTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTAACTACGCGACAGCGAACATCACGTACATACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca > 1:1561659/1‑150 (MQ=255) tctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCaga > 2:2048667/1‑150 (MQ=255) ctATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCagag > 2:1413860/1‑150 (MQ=255) aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGa > 2:3296016/1‑150 (MQ=255) tttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGaa < 2:734513/150‑1 (MQ=255) aGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatca < 1:2983627/150‑1 (MQ=255) gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcag > 1:4311559/1‑150 (MQ=255) gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcag > 1:3940786/1‑150 (MQ=255) gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAatcag < 1:1680417/150‑1 (MQ=255) ttAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATCAAGAACTGAGTACGCAGCAGAGGActcaga > 1:2260896/1‑150 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcagatca > 1:3212547/1‑150 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAatcagatca < 2:2167122/150‑1 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAatcagatca > 1:3750188/1‑150 (MQ=255) aCGTTCTGATATTGCTCTTTAAATAAAAGCAACGATTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGAACGCAGCAGAGGAatcagatca > 1:1834289/1‑150 (MQ=255) cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcagatcag > 1:4154320/1‑150 (MQ=255) cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcagatcag > 1:361113/1‑150 (MQ=255) ttCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGt > 1:1060807/1‑150 (MQ=255) ttCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGt < 1:2480434/150‑1 (MQ=255) ttCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGt > 1:1359764/1‑150 (MQ=255) cTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACTCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCAAAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTg > 2:197223/1‑150 (MQ=255) tGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGa > 2:1434440/1‑150 (MQ=255) gATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAc > 2:161993/1‑150 (MQ=255) atatTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcg > 1:3518735/1‑150 (MQ=255) atTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgcg > 2:3852616/1‑150 (MQ=255) atTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgcg < 2:806717/150‑1 (MQ=255) ctctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgc > 1:3976460/1‑150 (MQ=255) tctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg < 2:4172585/150‑1 (MQ=255) tctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg > 1:1062347/1‑150 (MQ=255) ctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcgc > 1:3423170/1‑150 (MQ=255) ctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcgc > 1:3830246/1‑150 (MQ=255) tttAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGcc > 1:1281666/1‑150 (MQ=255) aaataaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTc > 2:504803/1‑150 (MQ=255) aataaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTcc < 2:3818823/150‑1 (MQ=255) ataaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCa > 2:523540/1‑150 (MQ=255) ataaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCa > 2:1175767/1‑150 (MQ=255) aaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGa < 2:4188666/150‑1 (MQ=255) aaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGACTCAGATCAGGTTGACGCGCTGCGCCTTCCAGGaa > 2:3923828/1‑150 (MQ=255) aaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGaa > 2:4160757/1‑150 (MQ=255) aGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAAt > 1:2879721/1‑150 (MQ=255) aaCGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTa < 2:2656883/150‑1 (MQ=255) aaCGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTa < 2:2948419/150‑1 (MQ=255) gCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccc > 1:3048922/1‑150 (MQ=255) gCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccc > 1:74752/1‑150 (MQ=255) ttACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccccc < 2:3048225/150‑1 (MQ=255) tactacGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCg > 1:820614/1‑150 (MQ=255) ctacGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAg > 1:2801379/1‑150 (MQ=255) tacGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg < 1:2080336/150‑1 (MQ=255) tacGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg > 2:2435007/1‑150 (MQ=255) tacGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg > 1:3645035/1‑150 (MQ=255) acGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGa > 1:3989047/1‑150 (MQ=255) cgcgACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGAt < 2:3212027/150‑1 (MQ=255) cgACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGc > 1:1494014/1‑150 (MQ=255) aCAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCg > 1:2243288/1‑150 (MQ=255) cAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGa > 1:3677773/1‑150 (MQ=255) aGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGAt < 1:426436/150‑1 (MQ=255) gAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATAcc > 2:3562289/1‑150 (MQ=255) aaCATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCg < 1:3002909/150‑1 (MQ=255) tCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCg < 1:3397897/150‑1 (MQ=255) aCGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgca < 1:1156561/150‑1 (MQ=255) aCGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgca < 2:1099014/150‑1 (MQ=255) cGTACAGACCCAGACCTACAGCGATCATAGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgcag > 1:3884931/1‑150 (MQ=255) aCAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAc > 2:2003260/1‑150 (MQ=255) aCAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAc > 1:897421/1‑150 (MQ=255) aCAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAc < 1:2241338/150‑1 (MQ=255) aCAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAc < 1:3926720/150‑1 (MQ=255) cagacccagaccTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCAcc > 2:1290869/1‑150 (MQ=255) acccagaccTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGAt < 2:4016746/150‑1 (MQ=255) acccagaccTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGAt < 2:4015596/150‑1 (MQ=255) cagaccTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgc > 1:507720/1‑150 (MQ=255) ccTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgccgcc < 1:1521992/150‑1 (MQ=255) aGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGAcc < 1:3149713/150‑1 (MQ=255) atcatcGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCcatc > 2:2531699/1‑150 (MQ=255) atcatcGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCcatc < 1:952857/150‑1 (MQ=255) atcatcGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCcatc > 2:2531168/1‑150 (MQ=255) atcatcGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCcatc > 2:3739884/1‑150 (MQ=255) cGGGATAGCATCCACCAGACCCATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATcac > 1:568838/1‑150 (MQ=255) ggATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAg > 2:617767/1‑150 (MQ=255) aGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGc > 2:2684232/1‑150 (MQ=255) gCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCa < 1:1250767/150‑1 (MQ=255) ccaccaGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCa < 2:2222880/150‑1 (MQ=255) ccaGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGt > 1:203874/1‑150 (MQ=255) caGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTa > 2:3144036/1‑150 (MQ=255) ccATAACGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTAcagca < 1:690946/150‑1 (MQ=255) aTAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGa > 1:3912297/1‑150 (MQ=255) tAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGAt > 2:4056082/1‑150 (MQ=255) aaCGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATc < 1:66940/150‑1 (MQ=255) aCGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATcc > 1:2557971/1‑150 (MQ=255) aCGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATcc < 1:4180237/150‑1 (MQ=255) aCGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATcc < 1:1993038/150‑1 (MQ=255) cGATAAAGAACAGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCa > 1:1647089/1‑150 (MQ=255) aaaGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATAtt > 1:1913611/1‑150 (MQ=255) aaGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTc > 1:1592882/1‑150 (MQ=255) aGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTCa > 2:349192/1‑150 (MQ=255) aGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTCa < 1:239045/150‑1 (MQ=255) gAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTCAg > 1:2917891/1‑150 (MQ=255) | CACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCCAGACCCATCATCACAGCGGCAGCCATGTACAGCAGATCCATATTCAGGT > CP009273/3914246‑3914542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |