| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,915,091 | C→A | 8.0% | T107T (ACG→ACT) | atpB ← | F0 sector of membrane‑bound ATP synthase, subunit a |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,915,091 | 0 | C | A | 8.0% | 1023.4 / 43.3 | 274 | T107T (ACG→ACT) | atpB | F0 sector of membrane‑bound ATP synthase, subunit a |
| Reads supporting (aligned to +/- strand): ref base C (110/142); new base A (9/13); total (119/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 274 total aligned reads displayed.
CCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAA > CP009273/3914945‑3915237 | cccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTc < 1:1914780/150‑1 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCa < 1:439358/150‑1 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCa < 1:3227698/150‑1 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCa < 1:4140755/150‑1 (MQ=255) aGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAgg < 1:2664678/150‑1 (MQ=255) aGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAgg > 1:559106/1‑150 (MQ=255) cATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAg < 2:1470589/150‑1 (MQ=255) aTAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGc < 1:2965939/150‑1 (MQ=255) aGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCa > 2:1447827/1‑150 (MQ=255) cGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAgct < 1:1117362/150‑1 (MQ=255) gTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAgctt < 1:3818650/150‑1 (MQ=255) gTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAgctt < 2:3173277/150‑1 (MQ=255) ttCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAgcttg < 1:730632/150‑1 (MQ=255) ttCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAgcttg < 2:1770901/150‑1 (MQ=255) cACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAgcttgct > 1:231542/1‑150 (MQ=255) aCGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAgcttgctt < 1:2418616/150‑1 (MQ=255) gTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATAAGCTTGCtttt > 1:738023/1‑150 (MQ=255) tCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTg > 2:2664058/1‑150 (MQ=255) tCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTg < 2:54539/150‑1 (MQ=255) ccGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGc < 2:1050914/150‑1 (MQ=255) cGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGcc < 2:3302405/150‑1 (MQ=255) cGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGcc < 2:4323608/150‑1 (MQ=255) cAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCAt > 1:863386/1‑150 (MQ=255) gACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATgg < 2:1107929/150‑1 (MQ=255) gACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATgg < 1:1146609/150‑1 (MQ=255) gACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATgg < 1:838487/150‑1 (MQ=255) aCGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGt < 1:2196959/150‑1 (MQ=255) cGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTa > 1:1360691/1‑150 (MQ=255) cGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGGTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTa > 2:1715665/1‑150 (MQ=255) ggAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTAc < 1:2347567/150‑1 (MQ=255) aaCCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACAt > 2:789128/1‑150 (MQ=255) ccACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGt < 1:3955373/150‑1 (MQ=255) cacGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCtt < 2:2225322/150‑1 (MQ=255) cGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTc < 2:491528/150‑1 (MQ=255) cAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCAc < 2:1576659/150‑1 (MQ=255) cAGTGCAGGCAGACACAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCAc < 2:3803873/150‑1 (MQ=255) aGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACg < 2:3923763/150‑1 (MQ=255) tGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCt < 2:3516329/150‑1 (MQ=255) tGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCt < 2:2300152/150‑1 (MQ=255) gcaggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTa < 2:4344530/150‑1 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCAt > 1:2765121/1‑150 (MQ=255) cagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCAtt > 2:2049500/1‑150 (MQ=255) agACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTa < 1:2053612/150‑1 (MQ=255) ccAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACaa > 1:1906019/1‑150 (MQ=255) cAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACaaa < 1:1553337/150‑1 (MQ=255) cAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACaaa < 1:2796816/150‑1 (MQ=255) aGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAg > 1:3914661/1‑150 (MQ=255) aCATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCg > 1:2702307/1‑150 (MQ=255) cATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGa < 2:1384246/150‑1 (MQ=255) aTGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGAt > 2:3287510/1‑150 (MQ=255) gTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCa > 1:4261785/1‑150 (MQ=255) ttCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCAc > 2:4208249/1‑150 (MQ=255) ttCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCAc < 2:1712377/150‑1 (MQ=255) cAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCa < 1:2728843/150‑1 (MQ=255) tGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCaa < 2:2542500/150‑1 (MQ=255) tGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCaa > 1:450762/1‑150 (MQ=255) tACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAGGCCGATCACCAGCTCAATc < 2:26734/150‑1 (MQ=255) tACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATc < 1:4171562/150‑1 (MQ=255) tACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATc < 1:3937689/150‑1 (MQ=255) cGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcgc > 1:1599131/1‑150 (MQ=255) cagcagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGt > 2:2754463/1‑150 (MQ=255) agcagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTc > 1:3641553/1‑150 (MQ=255) agcagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTc > 1:312106/1‑150 (MQ=255) cagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTg < 1:2574466/150‑1 (MQ=255) cagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTg < 1:3908758/150‑1 (MQ=255) agGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGa > 1:3636180/1‑150 (MQ=255) agGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGa > 1:525039/1‑150 (MQ=255) ggTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGaa < 2:1233634/150‑1 (MQ=255) gATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACtt < 2:2939597/150‑1 (MQ=255) gATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACtt < 1:125070/150‑1 (MQ=255) tAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTAc > 2:4025296/1‑150 (MQ=255) ggCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCt > 2:3683395/1‑150 (MQ=255) ggCAGTAAATCCATCAGGTTCATCAGGAATAACCATACGAATATCGTCAGCCCCAGCGGAGCAATCAGAATGCTTATGCCAAGGTAAATGTCTTTCACGCTACAATTAACAAAGCCGATCACCAGCTCAATCACGGACTGAAACTTACCt > 2:3891714/1‑150 (MQ=255) cAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTgg < 1:2785070/150‑1 (MQ=255) cAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTgg < 1:3442213/150‑1 (MQ=255) tAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGcac > 2:840143/1‑150 (MQ=255) aaaTCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGcaca > 2:2244947/1‑150 (MQ=255) aaaTCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGcaca < 2:1617005/150‑1 (MQ=255) aaTCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCacac > 1:1633567/1‑150 (MQ=255) aaTCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCacac < 1:2783862/150‑1 (MQ=255) ccATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGc > 2:2967449/1‑150 (MQ=255) cATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCt > 2:3490429/1‑150 (MQ=255) cAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGt > 2:634621/1‑150 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc > 1:1053978/1‑150 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc < 2:1359971/150‑1 (MQ=255) tcatcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCt < 2:1364471/150‑1 (MQ=255) tcatcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCt > 1:435825/1‑150 (MQ=255) atcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCttt > 2:1852020/1‑150 (MQ=255) atcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCttt > 2:53521/1‑150 (MQ=255) atcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCtgt > 1:1696397/1‑148 (MQ=255) aGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTg > 2:3070505/1‑150 (MQ=255) ggAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTgg > 2:1189479/1‑150 (MQ=255) gAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgc > 1:988472/1‑150 (MQ=255) aaTACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgct > 1:2934017/1‑150 (MQ=255) cAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgcta > 2:1130741/1‑150 (MQ=255) aGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgcgac > 1:1013018/1‑150 (MQ=255) aCGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACgg > 2:3642483/1‑150 (MQ=255) aaGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAAt > 1:956902/1‑150 (MQ=255) aGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATa < 2:4136522/150‑1 (MQ=255) gATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATaa > 1:1329972/1‑150 (MQ=255) | CCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAA > CP009273/3914945‑3915237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |