| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,300,333 | T→A | 19.9% | E155D (GAA→GAT) | alsA ← | fused D‑allose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,300,333 | 0 | T | A | 19.9% | 635.3 / 153.0 | 256 | E155D (GAA→GAT) | alsA | fused D‑allose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base T (101/103); new base A (21/29); total (123/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
CTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGATG > CP009273/4300186‑4300482 | cTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATc > 1:1020812/1‑150 (MQ=255) ttATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCt < 2:2636141/150‑1 (MQ=255) tATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTa < 2:1836898/150‑1 (MQ=255) aTGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAg < 2:741473/150‑1 (MQ=255) gCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCa > 1:2830325/1‑150 (MQ=255) gCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCa > 1:1868451/1‑150 (MQ=255) cGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCAt > 2:4235527/1‑150 (MQ=255) gaTATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTg > 1:3199604/1‑150 (MQ=255) tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCt < 1:775790/150‑1 (MQ=255) tataGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCt < 1:1264926/150‑1 (MQ=255) aTGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTg > 2:431688/1‑150 (MQ=255) ggCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat < 1:2616313/150‑1 (MQ=255) gCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgata < 1:1162279/150‑1 (MQ=255) gCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgata > 1:2414464/1‑150 (MQ=255) ccGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatag < 2:3482569/150‑1 (MQ=255) ccGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatag > 1:1834555/1‑150 (MQ=255) gTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat > 1:3011074/1‑150 (MQ=255) gTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgatagat > 1:3864323/1‑150 (MQ=255) tACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATTATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTTTGGCTgatagata > 1:2373957/1‑150 (MQ=255) tACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTgatagata < 1:2920690/150‑1 (MQ=255) aCCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATaa > 1:4085025/1‑150 (MQ=255) ccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAAt < 2:2292164/150‑1 (MQ=255) ccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAAt < 1:2890607/150‑1 (MQ=255) ccTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAAt < 2:175030/150‑1 (MQ=255) tctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc < 1:95809/150‑1 (MQ=255) tctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTc > 2:2935089/1‑150 (MQ=255) tctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTc < 2:1913241/150‑1 (MQ=255) tctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTc < 1:2312666/150‑1 (MQ=255) tctTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTc < 1:341482/150‑1 (MQ=255) ttACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGcc > 2:848654/1‑150 (MQ=255) ttACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGcc < 1:3027626/150‑1 (MQ=255) aCGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCAc < 1:766128/150‑1 (MQ=255) gCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt > 2:3272004/1‑150 (MQ=255) cAACTGATTCATGATCAGAAACAGTTAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt < 1:3565185/150‑1 (MQ=255) cAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt < 1:1153685/150‑1 (MQ=255) cAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt < 2:2134296/150‑1 (MQ=255) aaCTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc < 2:34136/150‑1 (MQ=255) aaCTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc > 1:2529019/1‑150 (MQ=255) aCTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtct < 2:1141059/150‑1 (MQ=255) cTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtctc > 1:289496/1‑150 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa > 2:3925283/1‑150 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa > 1:2225334/1‑150 (MQ=255) tGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa > 2:493543/1‑150 (MQ=255) gATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCAt < 1:1032636/150‑1 (MQ=255) gATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCAt < 1:4346139/150‑1 (MQ=255) gATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCAt < 1:4131463/150‑1 (MQ=255) aTTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATc < 2:2798445/150‑1 (MQ=255) cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAg > 1:2784427/1‑150 (MQ=255) cATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAg < 2:4325901/150‑1 (MQ=255) aGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACt > 1:2082286/1‑150 (MQ=255) gAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACtt > 1:3172479/1‑150 (MQ=255) aaCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTc < 1:2425918/150‑1 (MQ=255) cAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCaa > 1:1725682/1‑150 (MQ=255) aGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAg < 2:2913959/150‑1 (MQ=255) tAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGccc > 2:1804642/1‑150 (MQ=255) aGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCa > 1:1989360/1‑150 (MQ=255) gTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCAc < 2:2201142/150‑1 (MQ=255) tCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCAcg < 1:338444/150‑1 (MQ=255) aCCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGt > 2:194923/1‑150 (MQ=255) ctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGtaata > 1:1620679/1‑150 (MQ=255) ctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGtaata < 1:1411024/150‑1 (MQ=255) ctTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGtaata < 1:3975681/150‑1 (MQ=255) ttATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAc > 2:3170959/1‑150 (MQ=255) ttATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAc > 1:3917190/1‑150 (MQ=255) tGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAAcatca > 1:99243/1‑150 (MQ=255) tgagtgagGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATgg > 2:567176/1‑150 (MQ=255) tgagtgagGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATATAGATCAACTTTCAAGCCCACGCGTAATAACATCATgg < 1:901455/150‑1 (MQ=255) tgagGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATggcggc > 2:928878/1‑150 (MQ=255) gaggagGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGgcggcg > 2:2778151/1‑150 (MQ=255) aggaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGgcgc > 1:745817/1‑150 (MQ=255) aggaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGgcgc > 1:1460122/1‑150 (MQ=255) aggaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGgcgc > 2:2559079/1‑150 (MQ=255) ggaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGcgcg < 2:3040596/150‑1 (MQ=255) gaggTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCgg > 1:2609832/1‑150 (MQ=255) gTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGaca > 2:4154959/1‑150 (MQ=255) gTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGaca > 2:3800561/1‑150 (MQ=255) tCATCCCTGATGATGACTTTGGCCTCGAGCATCAGCGTTTTGGCAATGTCTAGCATCTGCTTGTGGCTGATAGATAAAGTCGCCACTTTCTCATCTAGATCAACTTTCCAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAtt < 1:848659/150‑1 (MQ=255) tCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAGGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAtt > 2:1243902/1‑150 (MQ=255) tCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAtt < 2:1105338/150‑1 (MQ=255) cATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATTGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAttt < 2:3830049/150‑1 (MQ=255) cATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAttt < 2:646585/150‑1 (MQ=255) cATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGACAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCAttt > 1:3825264/1‑150 (MQ=255) ccATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTtctc > 1:1911226/1‑150 (MQ=255) cATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCg > 1:1481720/1‑150 (MQ=255) atgatgatgACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGc > 2:2022181/1‑150 (MQ=255) atgatgatgACTTTGGCATCGAGCATCAGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGc > 2:1557570/1‑150 (MQ=255) tgatgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGt > 1:2870291/1‑150 (MQ=255) atgaCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCg < 2:2441581/150‑1 (MQ=255) aCTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGata > 2:1468739/1‑150 (MQ=255) tttGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTCCTCGCCAGTCGataat < 1:3700294/150‑1 (MQ=255) cATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCcaca > 2:1212259/1‑150 (MQ=255) cATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCcaca > 2:4049040/1‑150 (MQ=255) aGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtt < 1:2545802/150‑1 (MQ=255) aGCGTTTTGGCAATTTCTAGCATCTGATTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtt < 2:3017147/150‑1 (MQ=255) aGCGTTTTGGCAATATCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGAtt > 2:3556807/1‑150 (MQ=255) ttGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTc < 2:4181426/150‑1 (MQ=255) ggCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGt > 1:62584/1‑150 (MQ=255) cAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCa < 1:2588757/150‑1 (MQ=255) aaTTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAg > 1:4331774/1‑150 (MQ=255) tttCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGAt < 1:1183706/150‑1 (MQ=255) | CTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGATCAACTTTCAAGCCCACGCGTAATAACATCATGGCGGCGCGGACACGCATTTCTCGCCAGTCGATAATATTGACGCCACAGATTTTTTTCGTCAGATG > CP009273/4300186‑4300482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |