| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,439,193 | C→A | 8.1% | V93F (GTT→TTT) | ppa ← | inorganic pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,439,193 | 0 | C | A | 8.1% | 1212.8 / 49.5 | 329 | V93F (GTT→TTT) | ppa | inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (173/128); new base A (15/13); total (188/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 335 total aligned reads displayed.
GTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCG > CP009273/4439044‑4439340 | gTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAc < 2:3547564/150‑1 (MQ=255)gTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAc < 1:2829353/150‑1 (MQ=255) tAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACg < 1:2254912/150‑1 (MQ=255) tAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATGTTCAGAACg > 2:1123373/1‑150 (MQ=255) cTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAAc > 2:1327959/1‑150 (MQ=255) tCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAAcc > 1:107435/1‑150 (MQ=255) tCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAAcc > 1:4045070/1‑150 (MQ=255) tCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAAcc > 2:2082878/1‑150 (MQ=255) tCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAAcc > 1:1435839/1‑150 (MQ=255) cGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCg < 2:3594311/150‑1 (MQ=255) agaagTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTAGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGAc > 2:318570/1‑150 (MQ=255) gaagTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACg < 2:1426344/150‑1 (MQ=255) aagTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACgg > 2:346333/1‑150 (MQ=255) agTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGc > 2:1070398/1‑150 (MQ=255) tGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCaa < 2:1511529/150‑1 (MQ=255) tGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCaa < 1:2349934/150‑1 (MQ=255) tGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCaa > 1:2440773/1‑150 (MQ=255) aTTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATc < 2:2335753/150‑1 (MQ=255) tGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATcaca > 2:1274434/1‑150 (MQ=255) cgcTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGa > 2:3256180/1‑150 (MQ=255) gcTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGaa > 1:1794204/1‑150 (MQ=255) gcTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGaa > 2:385526/1‑150 (MQ=255) tttCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAAcc < 1:3246701/150‑1 (MQ=255) ttCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAAccc > 1:708481/1‑150 (MQ=255) tCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCg < 1:2688241/150‑1 (MQ=255) agcagTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGc > 2:845011/1‑150 (MQ=255) gcagTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCt < 2:593556/150‑1 (MQ=255) cagTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTg > 1:1639228/1‑150 (MQ=255) cAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCg > 2:563841/1‑150 (MQ=255) cAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCg > 1:1307418/1‑150 (MQ=255) cAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCg < 1:3945127/150‑1 (MQ=255) cAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTa < 2:1165005/150‑1 (MQ=255) cAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTa < 1:2774612/150‑1 (MQ=255) gATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACg < 1:1620226/150‑1 (MQ=255) cGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAg < 1:258588/150‑1 (MQ=255) gTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGt > 1:2899747/1‑150 (MQ=255) aaCGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTgg < 2:4253909/150‑1 (MQ=255) aaCGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTgg > 1:4129823/1‑150 (MQ=255) cTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCa < 2:2832378/150‑1 (MQ=255) tttAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAg > 1:972550/1‑150 (MQ=255) tttAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAg > 1:3844864/1‑150 (MQ=255) tttAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAg > 1:2998142/1‑150 (MQ=255) tAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTa < 1:4321025/150‑1 (MQ=255) aaTGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTAc < 2:2891911/150‑1 (MQ=255) tCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAAcc < 1:1327959/150‑1 (MQ=255) gTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCgg < 1:1195631/150‑1 (MQ=255) aTTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGt < 1:527093/150‑1 (MQ=255) aTTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGt < 2:3840377/150‑1 (MQ=255) ttCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTc < 1:1133389/150‑1 (MQ=255) tCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGACCGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCa > 2:3900872/1‑150 (MQ=255) tCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCa > 2:1713191/1‑150 (MQ=255) cTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCAc > 2:4279943/1‑150 (MQ=255) ttGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCg > 2:3514062/1‑150 (MQ=255) tGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGt < 1:2456325/150‑1 (MQ=255) tGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGt > 2:2010023/1‑150 (MQ=255) tGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGt > 2:3113679/1‑150 (MQ=255) tGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGt > 2:4195441/1‑150 (MQ=255) tGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGt > 2:3562145/1‑150 (MQ=255) cTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTcc > 1:2176822/1‑150 (MQ=255) tCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCa < 2:1808975/150‑1 (MQ=255) tCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCa < 2:3998810/150‑1 (MQ=255) cAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCag > 2:3740966/1‑150 (MQ=255) cTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAgaga < 1:3454039/150‑1 (MQ=255) ttGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGAc < 1:2934268/150‑1 (MQ=255) tGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACa > 2:3817790/1‑150 (MQ=255) tGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACa > 2:2344107/1‑150 (MQ=255) ggAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTgg < 1:3818232/150‑1 (MQ=255) gAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGt > 2:3980769/1‑150 (MQ=255) gAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGt < 2:2791320/150‑1 (MQ=255) aaCCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGACCGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGtt < 2:3041594/150‑1 (MQ=255) aCCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTg < 1:3959398/150‑1 (MQ=255) cGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGAt > 1:1901902/1‑150 (MQ=255) cGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGAt < 1:476338/150‑1 (MQ=255) gCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATg < 1:1683307/150‑1 (MQ=255) cAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGt > 1:2166635/1‑150 (MQ=255) cAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAAcc > 2:2664817/1‑150 (MQ=255) aGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCg < 1:3119411/150‑1 (MQ=255) gTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGt > 1:2570298/1‑150 (MQ=255) tCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGt > 2:3626993/1‑150 (MQ=255) tCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGt < 1:2948783/150‑1 (MQ=255) cGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGtt > 2:3965235/1‑150 (MQ=255) gCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTg < 2:473515/150‑1 (MQ=255) aTCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCa > 2:2683244/1‑150 (MQ=255) ttCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATgg < 2:630960/150‑1 (MQ=255) tCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGa < 2:2259256/150‑1 (MQ=255) ccGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAg < 2:1639228/150‑1 (MQ=255) cGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGa < 2:676170/150‑1 (MQ=255) ggCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGaa > 2:3361090/1‑150 (MQ=255) ggCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGaa > 2:1250957/1‑150 (MQ=255) cTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACa < 1:357596/150‑1 (MQ=255) ttCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCATCGGGTTCGTAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACAt < 2:1369473/150‑1 (MQ=255) ttCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACAt < 1:163479/150‑1 (MQ=255) ttCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACAt < 2:2390932/150‑1 (MQ=255) ttCGTCGGTCATTTTCAGAAAGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACAt < 2:1884381/150‑1 (MQ=255) gTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTg < 2:3567131/150‑1 (MQ=255) aTTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGAc < 1:806051/150‑1 (MQ=255) cAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGaa > 2:2578159/1‑150 (MQ=255) aGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAg > 1:3694033/1‑150 (MQ=255) aaCGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCg < 1:3733448/150‑1 (MQ=255) aaCGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCg > 1:3482583/1‑150 (MQ=255) | GTAGTGCTCGAAGAAGTGAGCGATTTGCGCTTTCAGCAGTTCAGGCAGATCGTTAACGTCTTTAATGTGATCGTATTCTTTGCTCAGCTTGCTGTGCGGAACCGCAACCAGTTTCGCATCTTCACCGGCTTCGTCGGTCATTTTCAGAACGCCAACCGGACGGCAACGGATCACAGAACCCGGCTGCAGCGGGTACGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCG > CP009273/4439044‑4439340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |