| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,474,526 | C→A | 16.8% | D415Y (GAC→TAC) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,474,526 | 0 | C | A | 16.8% | 1069.0 / 136.1 | 352 | D415Y (GAC→TAC) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base C (165/126); new base A (40/21); total (205/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 356 total aligned reads displayed.
CGCCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGT > CP009273/4474377‑4474675 | cgcCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTc > 2:1406857/1‑150 (MQ=255) ccAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCAcc > 1:922388/1‑150 (MQ=255) ccAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCAcc < 1:3761189/150‑1 (MQ=255) ccAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCAcc < 1:1494006/150‑1 (MQ=255) aGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCgg > 1:1513082/1‑150 (MQ=255) tGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGAtt < 1:1661718/150‑1 (MQ=255) aCTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGtt < 1:4282618/150‑1 (MQ=255) aCTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGtt > 2:3762873/1‑150 (MQ=255) tACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAg < 2:3102308/150‑1 (MQ=255) gggTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGAcg > 1:1608522/1‑150 (MQ=255) gTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGAcgcg > 2:2389380/1‑150 (MQ=255) gTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGAcgcg > 1:2057926/1‑150 (MQ=255) tAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCgg > 2:3385339/1‑150 (MQ=255) aaGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCa > 2:2968428/1‑150 (MQ=255) aaGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCa > 2:564898/1‑150 (MQ=255) gCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAAt < 2:3236350/150‑1 (MQ=255) tGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAg > 1:2411470/1‑150 (MQ=255) aGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCa > 2:3321645/1‑150 (MQ=255) ggAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCAt < 1:810893/150‑1 (MQ=255) ggAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCAt < 1:2539536/150‑1 (MQ=255) ggAAGCAACCAGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCAt > 1:4192772/1‑150 (MQ=255) aaGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATgg > 2:199310/1‑150 (MQ=255) gCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGc < 2:2802713/150‑1 (MQ=255) gCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAAGGTTCGCCATCTCGGCAAAATTGGACTCCAGTAGTTCCTGATACTCGTCCCCCAGCGGTCAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCACTCAGATCATGGGc > 1:2306149/1‑150 (MQ=255) aaCCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCa < 1:4001865/150‑1 (MQ=255) ccTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGc < 1:4087541/150‑1 (MQ=255) tcGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGa > 2:3864293/2‑150 (MQ=255) gTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTa > 2:1821890/1‑150 (MQ=255) aTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATgg < 1:1578455/150‑1 (MQ=255) aTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATgg > 1:2189336/1‑150 (MQ=255) gCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTc < 2:364454/150‑1 (MQ=255) gCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTc < 2:1162927/150‑1 (MQ=255) caccaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCa > 2:3427783/1‑150 (MQ=255) caccaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCa > 2:4090725/1‑150 (MQ=255) caccaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCa > 2:1213498/1‑150 (MQ=255) accaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCAt > 1:1110438/1‑150 (MQ=255) ggACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGa > 1:3208815/1‑150 (MQ=255) gacgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGGTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGAGTATGGTTCGCCATCAGAc > 1:3688768/1‑150 (MQ=255) gacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAg < 1:1338945/150‑1 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt > 1:38811/1‑150 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt < 1:3321645/150‑1 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt < 2:817449/150‑1 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt > 2:1807135/1‑150 (MQ=255) cGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTaa < 1:391677/150‑1 (MQ=255) cGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTaa > 1:3169651/1‑150 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata > 1:1539886/1‑150 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata < 1:995860/150‑1 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata < 1:1057996/150‑1 (MQ=255) aaTGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatg < 1:3295247/150‑1 (MQ=255) tGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGTGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatgat > 2:1425151/1‑150 (MQ=255) gTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatgatg > 2:2647780/1‑150 (MQ=255) tCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAc < 1:3402221/150‑1 (MQ=255) gCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAccc < 1:2737871/150‑1 (MQ=255) gCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAccc > 2:169123/1‑150 (MQ=255) ccATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCGATGCGCGGTCTCAGGATTGTTCAGAAGAGGCAATCAGTTCATGGGCCAGAGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCa < 1:1013358/150‑1 (MQ=255) cATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCACTCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAg > 2:900474/1‑150 (MQ=255) cATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAg > 2:4196382/1‑150 (MQ=255) cATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAg > 2:2715477/1‑150 (MQ=255) atatCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgc > 1:1945636/1‑150 (MQ=255) atatCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgc < 2:3947981/150‑1 (MQ=255) atCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgcgc > 1:66016/1‑150 (MQ=255) ggCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGAt > 2:1327566/1‑150 (MQ=255) aaaaTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCAc < 1:3616811/150‑1 (MQ=255) aTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCa < 2:2089795/150‑1 (MQ=255) ttGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAg < 1:1406857/150‑1 (MQ=255) ttGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAg < 2:555506/150‑1 (MQ=255) tGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAgg < 1:2553987/150‑1 (MQ=255) gACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCa < 2:3706881/150‑1 (MQ=255) cTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCAcc < 1:2865110/150‑1 (MQ=255) ccAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCgg > 1:2905286/1‑150 (MQ=255) tgttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGc > 1:2241323/1‑150 (MQ=255) gttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCg < 1:1769581/150‑1 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:393021/1‑150 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:1008243/1‑150 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:3883211/1‑150 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:1697885/1‑150 (MQ=255) tGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGcc > 1:1222013/1‑150 (MQ=255) gATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCa > 1:4360613/1‑150 (MQ=255) aTACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCAc > 2:440099/1‑150 (MQ=255) tCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCa > 1:699433/1‑150 (MQ=255) tCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCa > 1:783652/1‑150 (MQ=255) cGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCaa < 2:3005915/150‑1 (MQ=255) cGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCaa > 1:3462457/1‑150 (MQ=255) cGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCaa > 1:2825860/1‑150 (MQ=255) gTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAAt > 2:677970/1‑150 (MQ=255) tCACCCAGCGGTAAGCGCCCTGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATc < 2:2449960/150‑1 (MQ=255) cACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCa < 2:2873544/150‑1 (MQ=255) ccAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCg > 2:2165397/1‑150 (MQ=255) ccAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCg > 2:1619513/1‑150 (MQ=255) aGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCt < 2:3519902/150‑1 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc > 1:2174234/1‑150 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc < 1:2299890/150‑1 (MQ=255) tAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCgg > 1:1730555/1‑150 (MQ=255) aGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCt < 1:1728289/150‑1 (MQ=255) gcgcCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTc < 2:4303902/150‑1 (MQ=255) aTGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAAc < 2:1110438/150‑1 (MQ=255) cgcgGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCt > 2:2622920/1‑150 (MQ=255) gTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAAc > 2:1522535/1‑150 (MQ=255) tCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACg < 2:4265385/150‑1 (MQ=255) cACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGt > 2:1179901/1‑150 (MQ=255) | CGCCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGT > CP009273/4474377‑4474675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |