| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,569,865 | G→T | 5.4% | intergenic (+137/+20) | symR → / ← hsdS | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA/specificity determinant for hsdM and hsdR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,569,865 | 0 | G | T | 5.4% | 1053.3 / 23.6 | 270 | intergenic (+137/+20) | symR/hsdS | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA/specificity determinant for hsdM and hsdR |
| Reads supporting (aligned to +/- strand): ref base G (159/96); new base T (7/8); total (166/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 275 total aligned reads displayed.
TCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTGGGCGGTA > CP009273/4569716‑4570014 | tCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAg < 2:4046046/150‑1 (MQ=255) aCCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATCTTTATGTGGGTTATGAGTGGCGTGAAATAATAAAAAGCGCACCGGACAGGTgcg > 2:3459701/1‑150 (MQ=255) aCCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTgcg < 2:1210463/150‑1 (MQ=255) aCCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTgcg > 1:131075/1‑150 (MQ=255) aTACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAATGTGCGCCAGAAaata < 2:2809831/150‑1 (MQ=255) tGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAATTATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGtt > 2:3867443/1‑150 (MQ=255) tatatCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAgg < 1:10098/150‑1 (MQ=255) tatCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGAt > 2:1881026/1‑150 (MQ=255) atcatcTGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATTTTTTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGAtt < 1:155079/150‑1 (MQ=255) atcatcAGTAAATAGGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTACATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGAtt < 2:1297837/150‑1 (MQ=255) catcaGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGAtttt > 2:2876553/1‑150 (MQ=255) atcaGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGAttttt > 1:2781727/1‑150 (MQ=255) caGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTa > 1:1244048/1‑150 (MQ=255) aGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTAc > 2:2928751/1‑150 (MQ=255) aGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTAc < 1:2319782/150‑1 (MQ=255) gTAAATATGGGGAAAGTCCAGCTAAAAATAGACTAAAATGGTCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACg < 1:3306779/150‑1 (MQ=255) gTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAACGGTGCGCCAGACACTAATGTTCAGGATTTTTTACg > 2:3055899/1‑150 (MQ=255) aaaTATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGACTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTg > 1:4016296/1‑150 (MQ=255) aaaTATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTg > 1:3932247/1‑150 (MQ=255) aaTATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGa > 2:366677/1‑150 (MQ=255) aaTATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGa > 2:863083/1‑150 (MQ=255) atGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGc > 2:2572826/1‑150 (MQ=255) ggAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCtttt > 2:4128105/1‑150 (MQ=255) gAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCttttt > 1:1729154/1‑150 (MQ=255) aaGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTa < 2:2823541/150‑1 (MQ=255) gTCCAGCTAAAAATAGAATAACATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTAcc < 2:559699/150‑1 (MQ=255) gTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTAcc < 1:125201/150‑1 (MQ=255) tCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTAccc < 2:1560667/150‑1 (MQ=255) tCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTAccc < 2:3295436/150‑1 (MQ=255) cAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTAccccc > 2:2534696/1‑150 (MQ=255) aGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTATACGTGAGGCTTTTTTACCCCCg > 1:2094201/1‑150 (MQ=255) tAAAAATAGACTAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTa < 1:2564943/150‑1 (MQ=255) aaaaaTAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAg < 1:492289/150‑1 (MQ=255) aaaaTAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGc > 1:1546899/1‑150 (MQ=255) aaaaTAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGc > 1:3771195/1‑150 (MQ=255) aaTAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTg < 2:1245200/150‑1 (MQ=255) aTAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACACCCGCTAGCTgc > 1:3437984/1‑150 (MQ=255) aGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTgcgc > 1:3136066/1‑150 (MQ=255) gAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGcgcg > 2:3965976/1‑150 (MQ=255) aacaTGGGCAAGTTCTGGAATGATTTAAAGATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCa < 2:2664091/147‑1 (MQ=255) aaaaTGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCa > 2:1531254/1‑150 (MQ=255) tGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCtt > 1:2539569/1‑150 (MQ=255) tGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCtt > 1:870812/1‑150 (MQ=255) ggCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTg < 1:1800011/150‑1 (MQ=255) cAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGAt > 2:2229381/1‑150 (MQ=255) aaTTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGAtt < 2:1730842/150‑1 (MQ=255) aaTTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGAtt > 1:2920306/1‑150 (MQ=255) tttCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGAtttt < 1:1980271/150‑1 (MQ=255) ttCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGAttttt < 1:2456378/150‑1 (MQ=255) tGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTcc < 2:1359025/150‑1 (MQ=255) tGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTcc > 2:1010042/1‑150 (MQ=255) ggAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCa > 1:899208/1‑150 (MQ=255) ggAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCa > 1:2224791/1‑150 (MQ=255) gAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAg > 1:2925028/1‑150 (MQ=255) aaTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGc > 1:2081821/1‑150 (MQ=255) aTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCa < 1:1374953/150‑1 (MQ=255) aTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCa > 2:1670263/1‑150 (MQ=255) aTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCa > 2:1671277/1‑150 (MQ=255) aTGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGATTTGATTTTTTCCAGCa > 2:1798639/1‑150 (MQ=255) tGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCaa < 2:3538796/150‑1 (MQ=255) tttAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAAcgc > 2:3584426/1‑150 (MQ=255) tAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcgg > 1:132335/1‑150 (MQ=255) aaaTATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcggc < 1:3630056/150‑1 (MQ=255) aaaTATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcggc > 1:567359/1‑150 (MQ=255) atatatTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTATTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcggcgg > 2:1577264/1‑150 (MQ=255) tagatTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGCAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcggcggc < 2:2308348/147‑1 (MQ=255) atatTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAAGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACgcggcggcg > 1:297676/1‑150 (MQ=255) tatTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGgcgc > 1:4131017/1‑150 (MQ=255) atTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCt > 2:3926140/1‑150 (MQ=255) gggTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTtctc > 1:916005/1‑150 (MQ=255) gTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATTATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCg < 1:3503617/150‑1 (MQ=255) gTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCg > 2:4226724/1‑150 (MQ=255) ttATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGc > 2:2167770/1‑150 (MQ=255) aTGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTg < 1:4183763/150‑1 (MQ=255) aTGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTg > 1:515197/1‑150 (MQ=255) aTGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTg < 1:4044678/150‑1 (MQ=255) gATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGAt > 1:4352839/1‑150 (MQ=255) aTTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATc < 2:2085744/150‑1 (MQ=255) gTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGCTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATcc > 2:4304971/1‑150 (MQ=255) tGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCg > 1:389840/1‑150 (MQ=255) aaaTAATAAAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCggg > 1:2339572/1‑150 (MQ=255) aaaTAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCggg > 2:1438267/1‑150 (MQ=255) ataataAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGtt < 1:1139966/150‑1 (MQ=255) taataaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGttt < 1:3825699/150‑1 (MQ=255) taataaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGttt > 1:3585425/1‑150 (MQ=255) taataaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGttt > 2:519513/1‑150 (MQ=255) ataaAAAGCGCACCGGAAATGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTc > 2:3470825/1‑150 (MQ=255) ataaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTc < 2:44263/150‑1 (MQ=255) ataaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTc > 2:3242732/1‑150 (MQ=255) taaAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCg < 2:1644096/150‑1 (MQ=255) aaaGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGcc > 2:1263761/1‑150 (MQ=255) aaGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGccc < 1:3955011/150‑1 (MQ=255) aaGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGccc > 2:2390767/1‑150 (MQ=255) cgcACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGcc > 1:646158/1‑150 (MQ=255) ccGGAAAGGTGCGACAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTg < 1:1660104/150‑1 (MQ=255) cGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTgg > 2:4226492/1‑150 (MQ=255) ggAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTggg < 1:1495948/150‑1 (MQ=255) aaaGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTGGGCg < 2:4198313/150‑1 (MQ=255) aaGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTGGGCgg > 1:2838234/1‑150 (MQ=255) ggTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTGGGCGGTa > 2:1849815/1‑150 (MQ=255) | TCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCCAGAAAATAATGTTCAGGATTTTTTACGTGAGGCTTTTTTACCCCCGCTAGCTGCGCGTTCAGCTTTGATTTTTTCCAGCAACGCGGCGGCGCTGTTTTCTCCGCTGATCAAATCCGGGTTTTCGGCCCGCCACTGGGCGGTA > CP009273/4569716‑4570014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |