| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 1,428,894 | IS2 (–) +5 bp | 93.4% | intergenic (‑413/+317) | ynaE ← / ← ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1428894 = | 17 (0.060) | 218 (0.790) | 117/278 | NT | 92.5% | intergenic (‑413/+321) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | = 1463497 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | CP009273 | = 1428898 | 17 (0.060) | 260 (0.940) | 133/278 | NT | 93.6% | intergenic (‑417/+317) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | 1462167 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
Only 100 of 519 total aligned reads displayed.
TTGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGA > CP009273/1428746‑1429042 | ttGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCt < 1:2564360/150‑1 (MQ=37) tcttgtcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTga > 2:3022918‑M1/147‑150 (MQ=255) tCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTgaa < 1:1408251/150‑1 (MQ=37) tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccactgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaaga > 1:1496428‑M1/144‑150 (MQ=255) gTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtg > 2:2578430‑M1/1‑148 (MQ=255) ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaagaa > 2:871920‑M1/143‑150 (MQ=255) tcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaagaag > 2:2651331‑M1/142‑150 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttattgaagtgatattggttgtctggagattcagggggccagtctaCTgaagaagaa > 2:3218260‑M1/140‑150 (MQ=255) aGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggattt > 2:4326483‑M1/1‑143 (MQ=255) gTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgc > 2:2327349‑M1/1‑141 (MQ=255) gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAat > 1:3309065‑M1/136‑150 (MQ=255) ataCAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgccc > 2:221693‑M1/1‑139 (MQ=255) ggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAatat > 2:724785‑M1/134‑150 (MQ=255) acgccgtctgcgtttctccggcccgaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCaa > 2:4150447‑M1/131‑150 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGt < 2:2009599‑M1/23‑1 (MQ=255) ccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGt > 2:772755‑M1/128‑150 (MQ=255) tGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttc < 2:363983‑M1/150‑21 (MQ=255) cTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttcca > 2:2910122‑M1/1‑128 (MQ=255) tAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtgtatttgcacctatatttcaag > 2:4597527‑M1/1‑127 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAg > 2:132590‑M1/121‑150 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAg > 2:1034505‑M1/121‑150 (MQ=255) aCAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagac < 2:3666052‑M1/150‑26 (MQ=255) aCAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagac > 2:2116492‑M1/1‑125 (MQ=255) tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGcc < 1:1345022‑M1/32‑1 (MQ=255) ggTGGCGGCAAAAATCAGGCGGTTTATGGCACAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatc < 2:1572152‑M1/150‑29 (MQ=255) ggcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgt < 1:2794945‑M1/150‑32 (MQ=255) ggcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgt < 1:181835‑M1/150‑32 (MQ=255) gcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTatat < 1:2364727/150‑1 (MQ=39) ccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTatat > 1:721503‑M1/114‑150 (MQ=255) cggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATg > 1:2202149‑M1/113‑150 (MQ=255) cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCtt < 2:1786086‑M1/42‑1 (MQ=255) aaaaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcac > 1:570355‑M1/1‑113 (MQ=255) aaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcactt > 2:1480873‑M1/1‑111 (MQ=255) aaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcactta > 2:2832281‑M1/1‑110 (MQ=255) tCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaac > 1:4627156‑M1/1‑108 (MQ=255) acatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGc > 1:3937768‑M1/103‑150 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggagga > 1:4760747‑M1/97‑150 (MQ=255) atcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCggagga > 2:3302446‑M1/97‑150 (MQ=255) tATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaag < 1:3011622‑M1/150‑53 (MQ=255) atctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatg > 1:1836270‑M1/94‑150 (MQ=255) tGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc < 1:2019719‑M1/150‑55 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAAtgt < 1:3983769‑M1/62‑1 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAAtgt < 1:3879345‑M1/62‑1 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAAtgt < 1:1577365‑M1/62‑1 (MQ=255) aaGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc > 1:3579587‑M1/1‑90 (MQ=255) gTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata < 1:337508‑M1/150‑69 (MQ=255) agtataaaaaatagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATg > 1:4539365‑M1/76‑150 (MQ=255) aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCt < 1:2163485‑M1/80‑1 (MQ=255) aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCt < 1:1267060‑M1/80‑1 (MQ=255) ctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATa < 2:405166‑M1/85‑1 (MQ=255) aaCTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcga < 1:2282673‑M1/150‑81 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTg < 2:928597‑M1/89‑1 (MQ=255) attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGa < 2:800368‑M1/90‑1 (MQ=255) ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGaa > 1:108263‑M1/60‑150 (MQ=255) tATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac > 1:2910019‑M1/1‑62 (MQ=255) tATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac < 2:4720413‑M1/150‑89 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCg < 2:2749285‑M1/97‑1 (MQ=255) gaCTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca > 2:1077644‑M1/1‑54 (MQ=255) cacttatttaagtgatattggttgtcgggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGt > 1:3482836‑M1/50‑150 (MQ=255) ctctACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAATAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCa < 2:3434520/150‑1 (MQ=21) tACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg > 2:3535571‑M1/1‑49 (MQ=255) tACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatg > 1:2763712‑M1/1‑49 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCAcgt > 1:119068‑M1/45‑150 (MQ=255) cacGGATTGGGTATAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg < 2:1655577‑M1/150‑104 (MQ=255) acGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgg < 2:3137464‑M1/150‑105 (MQ=255) cGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcgga > 1:3776152‑M1/1‑45 (MQ=255) tgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGc > 2:1849459‑M1/38‑150 (MQ=255) tgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGc > 2:4253713‑M1/38‑150 (MQ=255) tattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAGTGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAg < 2:3351685‑M1/116‑1 (MQ=255) ggTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccatt > 1:3690577‑M1/1‑38 (MQ=255) attggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGa < 1:4482824‑M1/117‑1 (MQ=255) gTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc < 2:60119‑M1/150‑114 (MQ=255) tggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAAc < 1:2626513‑M1/119‑1 (MQ=255) ttAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt > 1:1029525‑M1/1‑35 (MQ=255) ggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACg > 1:1644062‑M1/31‑150 (MQ=255) tAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt > 2:444937‑M1/1‑34 (MQ=255) tAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt < 1:960464‑M1/150‑117 (MQ=255) aaaaGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta < 1:3206229‑M1/150‑118 (MQ=255) aaGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata > 1:2065053‑M1/1‑31 (MQ=255) aGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa > 2:3889816‑M1/1‑30 (MQ=255) gTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat > 1:4310359‑M1/1‑29 (MQ=255) tataCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg < 2:12324‑M1/150‑123 (MQ=255) agattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGCTGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggtt > 2:3059861‑M1/21‑150 (MQ=255) aCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc < 2:1923889‑M1/150‑126 (MQ=255) gattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttg < 1:3156058‑M1/131‑1 (MQ=255) gattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTAGTATGCAAGAACGTGCTGCggttg > 2:3454879‑M1/20‑150 (MQ=255) aTAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcga > 2:1150062‑M1/1‑23 (MQ=255) tAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaa > 2:1022434‑M1/1‑22 (MQ=255) tcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggtt < 1:4040787‑M1/134‑1 (MQ=255) cagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTAGTATGCAAGAACGTGCTGCGGTTGGttt > 1:4420223‑M1/16‑150 (MQ=255) aTAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc > 1:4388397‑M1/1‑19 (MQ=255) aaCATTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcct < 1:4212361‑M1/150‑134 (MQ=255) gggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACt > 1:3227809‑M1/12‑150 (MQ=255) gggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACt > 2:520568‑M1/12‑150 (MQ=255) ggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACtt > 1:4157374‑M1/11‑150 (MQ=255) cAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACtt < 1:3510309/150‑1 (MQ=255) gccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTAGTATGCAAGAACGTGCTGCGGTTGGTTTGACttt < 2:3574366‑M1/141‑1 (MQ=255) ccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttg < 2:2407205‑M1/142‑1 (MQ=255) tttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaag < 2:2384036‑M1/150‑141 (MQ=255) ttATCTGAAtggatttgccccgatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcccttcgttataatgctcgaacgcctctgcaagg > 2:3734411‑M1/1‑9 (MQ=255) | TTGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGA > CP009273/1428746‑1429042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |