| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,821,696 | A→T | 42.2% | L274Q (CTG→CAG) | astB ← | succinylarginine dihydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,821,696 | 0 | A | T | 42.2% | 201.2 / inf | 344 | L274Q (CTG→CAG) | astB | succinylarginine dihydrolase |
| Reads supporting (aligned to +/- strand): ref base A (113/85); new base T (68/77); total (181/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.41e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.89e-01 | |||||||||||
Only 100 of 345 total aligned reads displayed.
CTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTC > CP009273/1821548‑1821845 | tGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGt > 2:3275510/1‑150 (MQ=255) gAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTa < 1:481730/150‑1 (MQ=255) gAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTa > 2:1082484/1‑150 (MQ=255) gAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTa > 1:2897717/1‑150 (MQ=255) gAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTa < 2:476553/150‑1 (MQ=255) aGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTaa < 1:2083687/150‑1 (MQ=255) ccAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACt < 2:1942772/150‑1 (MQ=255) aCATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGgc < 1:4166912/150‑1 (MQ=255) atcatGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGgcga > 2:3537246/1‑150 (MQ=255) atcatGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGgcga > 2:1268901/1‑150 (MQ=255) catGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGgcgagc > 2:260660/1‑150 (MQ=255) tGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGgcgagcga < 2:726641/150‑1 (MQ=255) ggAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGaa > 1:696381/1‑150 (MQ=255) ggAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGaa > 1:3875719/1‑150 (MQ=255) ggAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGaa > 2:1465659/1‑150 (MQ=255) gAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAAc < 1:1897787/150‑1 (MQ=255) gAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAAc < 2:3024995/150‑1 (MQ=255) aaCCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACg < 1:3152370/150‑1 (MQ=255) aaCCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACg > 1:1543487/1‑150 (MQ=255) catcatCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCt < 2:2018385/150‑1 (MQ=255) catcatCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCt < 1:4248596/150‑1 (MQ=255) catcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGtt > 1:3017897/1‑150 (MQ=255) atcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTtg < 2:2181387/150‑1 (MQ=255) cgcgGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTtggt > 1:3795647/1‑150 (MQ=255) gcgGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTtggtg < 2:2226604/150‑1 (MQ=255) cgGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTtggtgg > 2:3929807/1‑150 (MQ=255) cgGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCAGTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTtggtgg > 2:3618897/1‑150 (MQ=255) ggCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGc > 1:23112/1‑150 (MQ=255) agcagTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAAc < 1:1391811/150‑1 (MQ=255) tGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCAcc > 1:4731948/1‑150 (MQ=255) gCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTg < 1:4316322/150‑1 (MQ=255) gCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTg > 1:2782484/1‑150 (MQ=255) tGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGc < 2:3346681/150‑1 (MQ=255) gTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCg > 2:4184432/1‑150 (MQ=255) aaCAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTa > 1:3335592/1‑150 (MQ=255) aaCAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTa < 1:1300833/150‑1 (MQ=255) aCAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTAc > 2:2317381/1‑150 (MQ=255) taTAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTTTTGGTGGCAAAACAGCACCTGGCGGTTACTCa < 2:2132159/149‑1 (MQ=255) gATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCa < 2:2429072/150‑1 (MQ=255) tAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACg < 1:246548/150‑1 (MQ=255) aGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACgg > 1:470574/1‑150 (MQ=255) aGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACgg > 1:1077825/1‑150 (MQ=255) aGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAAt < 1:4004344/150‑1 (MQ=255) gACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATc < 2:3818207/150‑1 (MQ=255) cacCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCAc < 1:2429242/150‑1 (MQ=255) cacCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCAc < 1:3274592/150‑1 (MQ=255) acCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACg > 2:4104697/1‑150 (MQ=255) acCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACg > 1:537952/1‑150 (MQ=255) ccGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGt > 2:4091900/1‑150 (MQ=255) cGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTc > 1:2841449/1‑150 (MQ=255) cGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTc > 1:4398355/1‑150 (MQ=255) gTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCa < 1:2200176/150‑1 (MQ=255) gTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCa > 1:1804707/1‑150 (MQ=255) tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCAt > 1:3700095/1‑150 (MQ=255) tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCAt > 2:768297/1‑150 (MQ=255) aTCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCAtt < 1:3122589/150‑1 (MQ=255) tCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTa < 1:2323529/150‑1 (MQ=255) cAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTAt < 2:4520486/150‑1 (MQ=255) cAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTAt < 2:4522142/150‑1 (MQ=255) acacGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaa > 1:1910390/1‑150 (MQ=255) acacGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaa < 2:2372199/150‑1 (MQ=255) acGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaaaa > 1:120065/1‑150 (MQ=255) cGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaaaaa < 2:3125635/150‑1 (MQ=255) gAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACg < 1:3062516/150‑1 (MQ=255) aaCCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc < 2:873164/150‑1 (MQ=255) aaCCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc > 1:1489685/1‑150 (MQ=255) cTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTg > 2:2239216/1‑150 (MQ=255) cGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAAc < 2:2675960/150‑1 (MQ=255) ggAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACg < 2:4242997/150‑1 (MQ=255) ggAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACg > 1:3366441/1‑150 (MQ=255) atttatATCGCAATAAAACAATTGCCCCGCGCACGCTGTTTTGCCTTTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGAAAAACAGCACCTGGCGGTTACACACGGAAATCACTTATTTATCAAAAACGCCCTGGTCGATAACGTcc < 1:3222402/145‑1 (MQ=255) aCTTCTATCGCAATAAAACCATTGACCCGCGCACGCTGGTTTGCCTTTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGAAAAACAGCACCTGGGGTTTACTCACGGAAATCACTTCATTATTAAAAACGCCCTGGTCGATAACGTcc < 1:967946/150‑1 (MQ=255) cTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCg < 2:2929571/150‑1 (MQ=255) cTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCg > 1:4582015/1‑150 (MQ=255) attatATCGCAATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTTTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGAAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCg < 1:3921923/146‑1 (MQ=255) cTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGt > 2:4013262/1‑150 (MQ=255) tCGCCATAACACCATTGACCCGCGCCCGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGtttt < 2:114156/150‑1 (MQ=255) tCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGtttt < 2:524182/150‑1 (MQ=255) cGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTg > 1:349966/1‑150 (MQ=255) cATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTg > 2:3503042/1‑150 (MQ=255) cATAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTg > 2:1729740/1‑150 (MQ=255) aTAAAACCTTTGACCCGCGCACGCTGTTTTGCC‑TTAACGTGTGACTGGCGAGCTAACGCGTGTTGGTGCAAAAACAGCACCTGGGGTTTACTCACGGAAATCACTTATTTATCAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTgg < 1:1648193/150‑1 (MQ=255) tAAAACCATTGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTggg > 2:3193490/1‑150 (MQ=255) aaaCCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCg > 2:4748844/1‑150 (MQ=255) aaaCCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCg > 1:4073265/1‑150 (MQ=255) aaCCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGa > 2:2298890/1‑150 (MQ=255) atggACCCGCGCACGCCGGTTTGCCATTACC‑TGGGACGGGCGAGCTACCGCCTGTTGGTGGCAAAACCGCACCGGGCGGTTACTCACGCCAACCACGACATTATCAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAAt < 1:4535410/147‑1 (MQ=255) ttGACCCGCGCACGCAGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATc < 2:4639363/150‑1 (MQ=255) ttGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGTGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATc < 2:3170324/150‑1 (MQ=255) gcgcCCGCTGGTTTGCCAGTAAC‑TGTGACTGGCGTGCTAACGCCTGTTGGTGGAAAAACAGCACCGGGCGGTTACTCCCGGCAATCACTTCATTATTAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGtt < 1:105344/150‑1 (MQ=255) gcgcACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGtt > 1:2642544/1‑150 (MQ=255) cgcacgcaGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTg > 2:1410628/1‑150 (MQ=255) gcacgcaGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTgg > 1:1626636/1‑150 (MQ=255) ccgctGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTgggg < 1:2581960/149‑1 (MQ=255) cgcaGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGa < 2:1579290/150‑1 (MQ=255) aGGTTTGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTc > 1:4307417/1‑150 (MQ=255) ggTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCa > 2:2784786/1‑150 (MQ=255) tGCCTGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTg > 2:3411740/1‑150 (MQ=255) gCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGa > 2:576547/1‑150 (MQ=255) ccAGTAAC‑AGTGACTGGCGAGCGAACGCCTGTAGGTGGCAAAACACCACCTGGCGGTTACTCACGGCACTCACGTCAATATGAAAAACGCCCAGGTCGATAAACTCCCGGTTTTGCTGGGCGAAAATCACATGATGGGGATTCACCTGAt > 2:656379/1‑150 (MQ=255) | CTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAAC‑TGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTC > CP009273/1821548‑1821845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |