| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,713 | C→A | 30.2% | intergenic (‑30/+278) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,713 | 0 | C | A | 30.2% | 276.7 / 44.8 | 168 | intergenic (‑30/+278) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (26/81); new base A (35/18); total (69/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 169 total aligned reads displayed.
TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170565‑2170860 | ttGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑a > 2:1454405/1‑150 (MQ=255) tGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑aa < 1:1616550/150‑1 (MQ=255) tGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCCGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑aa < 2:1471639/150‑1 (MQ=255) tGGCAGCGGTTTCGACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCCGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑aa < 2:4203352/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAat < 1:3889965/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAat < 1:2175469/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAat < 1:2455654/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAat < 2:1129397/150‑1 (MQ=255) cAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTA‑aaaaa > 2:4168486/1‑149 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAata < 2:724588/150‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAata < 2:724490/150‑1 (MQ=255) aGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAata < 2:496386/150‑1 (MQ=255) gCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAatat < 2:4159198/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAAtata < 1:2494121/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAAtata < 2:4556260/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAAtata < 1:2615354/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAAtata < 1:2492629/150‑1 (MQ=255) cGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTC‑CAAAtata > 2:3481898/1‑150 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTA‑AAAATATaa > 2:349829/1‑150 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATaa < 1:3503217/150‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATaa < 1:3505974/150‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATaa < 2:3382847/150‑1 (MQ=255) ggTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTAGATTTA‑AAAAAATaa > 2:502938/1‑150 (MQ=255) gTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTA‑AAAATATAAt > 2:1274561/1‑150 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATg < 2:4153898/150‑1 (MQ=255) tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGGGTTTTTTGTTTA‑AAAATATaaat > 1:1226703/1‑148 (MQ=255) tACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAat < 1:4621232/150‑1 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTGTTTTCGATTTA‑AAAATATAATGTAattat > 2:793541/1‑150 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAattatt < 2:4173377/150‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTA‑AAAATATAAATAAattatt > 2:1658964/1‑150 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTC‑AAAATATAATGAAAATAttt > 2:1638920/1‑150 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTGTGTTTTAGATTTA‑AAAAAAAAATGAAATTAttt > 2:4043897/1‑150 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTg < 2:1342413/150‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGt < 2:2437922/150‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGtt < 2:3283940/150‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACATACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTa < 2:3546794/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 2:1098954/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 1:4622173/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 1:1408926/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCgag < 1:552607/150‑1 (MQ=255) gaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGAt < 1:337757/150‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATaa < 1:1272623/150‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATaa < 1:4175409/150‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAAc < 2:364280/150‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTA‑AAAAAATAAAGAAAATATTTTTTTTTTAA‑TATAGAGATAAc > 1:1524314/1‑150 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATACCg < 1:1986154/150‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACg < 2:4506432/150‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGAATTC‑AAAATAAAATTAAAATATTTTTTTTTAAA‑TATAGAGATAAAGAt > 2:2247393/1‑150 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGATTTA‑AAAATATTATTAAAATATTTTTTTTTTAA‑TATAGAGATAACCATc > 2:3022389/1‑150 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTATTTTTG‑AAAATATAATTTAATTATTTTTTTTTAAA‑TATAGATATaaacata > 2:3022383/1‑145 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATACCCTGTCGTTTTTTTTGGATTTA‑AAAATATAATTAAAATATTTTTTTTTTAA‑TATATAGATAAAGAta > 2:4529511/1‑149 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGAGACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATcac‑a < 1:847443/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑aaa < 2:9820/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGGTTTGGATTTT‑AAAATATAATGAAAATATTTTTTTTTTAA‑TATAGAGATTACGATCAC‑aaa > 1:3378027/1‑150 (MQ=255) agAATGGCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTCTTAAA‑TATCGAGATAACGATCAC‑aaa < 2:2401356/149‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑aaaaa < 2:2921667/150‑1 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAAc < 2:3406260/150‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTC‑AAAATATAATTAAATTATTTGTTTTTTAA‑TATAGTGTTAAAGATCAC‑aaaaaag > 2:2872050/1‑148 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTA‑AAAATAAAATGAAATTATTTGTTTTTAAA‑TATAGAGATAACGATCAC‑AAAAACGaaa > 2:3440844/1‑148 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGTTTTC‑ATAAAATAAAGTAAAAATTTTTTTTTTTA‑TATAGTGATAAACAACAC‑AAAAAAGACaa > 1:2102703/1‑150 (MQ=255) aaCCGAATAACCGCCGCGCTGTGCGTTTTTATGATTCTGATTTGTCGATACCACTTAATTTTTCATATCCTGTCTTTTTTTTTCTATTTA‑AAAATATAATTAATTTTTTTTTTTTTAAT‑TATCTTTATAACGATAAA‑AAACACGACAata < 2:1483788/150‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTTTTCTGCATGTGCTTTGTCGATACCACGTACATTTTCTTATCCTGTCGTTTGTTTTCTTTTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACTATCAC‑AAAAACGACAATATGaa < 2:4171617/150‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGaa < 2:2365799/150‑1 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTTTTTTTG‑AAAAAAAAATGAAAATATTTTTTTTTTAA‑AATATAGATAAAAAAAAC‑ACAAAACACAATAAGaaa > 1:1283678/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTC‑AAAATATAATGTAATTATTTTTTTTTTAA‑TATAGAGATAACGATCAA‑AAAAAAGACAATATGAAAat > 2:4309910/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTA‑AAAATATAATTAAATTATTTTTTTTTAAA‑AATAGAGATAACCCTAAC‑AAAAACGACAAAATTAAAat > 2:1335857/1‑150 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGATTTA‑AAAAAAAAATTAAAATATTTTTTTTTTAA‑AAAATAGGTAACGATAACAAAAAACAACAAAATCAAAattat > 1:4352631/1‑150 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTCGAATTA‑AAAATAAAAAGAAATTATTTGTTTTTAAA‑TTTCGAGATAACGATAAA‑AAAAAAGACAATAATAAAaatatta > 2:1034708/1‑149 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTC‑AAAATATAATGAAAATATTTTTTTTTTTA‑TATATAGATAAAGATAAC‑AAAAAAGAAAAAATGAAAattatta > 2:4081506/1‑149 (MQ=255) gcgcTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACTTACATTTTAATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAATTTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCgag < 2:2236514/150‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGTTTTA‑AAAAAATAAATAAAATAATTTTTTTTTAA‑TATAGATATAAACAAAAC‑AAAAAAAACAAAATTAAAAATATTTGAGGAG‑TTTAAGGc > 1:284405/1‑150 (MQ=255) ttCAGCATCTGCTTTGTCTATACCACTTACATTTTCATATCCTGTCTTTTGTTTTCTATTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCaa < 2:2158611/150‑1 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTA‑AAAAAATAATGAAATTATTTTTTTTTTAA‑TATCGAGATAAAGATAAC‑AAAAACGAAAATATTAAAATTATTAGATGAG‑TGAAATGCaa > 2:3579749/1‑150 (MQ=255) tCAGAATCTTTTTTGTCTAAACCACTTAAATTTAAATATCCTGTTTTTTTTTTTCTATTAA‑AAAATATAATTAATTTTTTTTTTTTAAAT‑TATCTATAAAACTAAAAA‑AAACACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCaaa < 1:3267233/150‑1 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTG‑AAAATATAATGAAATTATTTTTTTTTTAA‑TATAGATATAAAGATAAC‑AAAAAAAACAAAAATAAAATTATTTGAGGGG‑TGTAAGGGaaaaa > 2:2009255/1‑150 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTA‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCTAGATAACCATAAC‑AAAAAAGACAAAATTAAAATTATTCGAGGAT‑TGAAATGCaaaaaaaag > 2:401805/1‑148 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTGGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAAAGATAAC‑AAAAAAGACAATATTAAAATTATTGGTGGAGTTTAAGGGCAAAAAAACgcca > 2:2708306/1‑147 (MQ=255) ggtctacaCCACGTACATTTACATATCCTGTCGTTTGTTTTCTATTAC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTccc < 2:2342232/143‑1 (MQ=255) ggacGATCCCCCGTACATTTTCATACCCCGCCGTTTGTGTTCGATTAC‑AAAATATAATGAAATTTATTGTTTTTAAA‑TATCGAGATAACGACCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTccc < 2:2947096/147‑1 (MQ=255) aaaCCACTTACTTTTTAATAACCTGTCGTTTGTTTTCGATTTA‑AAAATATAATCAATTTATTTTTTTTTAAA‑TATCGAGATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:2471852/148‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTGTTTTCTATTTA‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAgg < 2:3107848/150‑1 (MQ=255) aCCACGTACAGTTTCATATCCTGTCGTTTGTTTTAGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATAGAGATAACGATAAC‑AAAAAACAAAAAAATAAAAATATTCGAGGGG‑TGAAATGGAAAAAAAAGGCCACCCGaaatgg > 2:4771282/1‑145 (MQ=255) cACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 2:352624/150‑1 (MQ=255) aaaTTTTAATTTCTTGTC‑TTTTTTTTCATTTTAAAAAATATAAT‑AAATTTTTTTTTTTAAAATTACCTAGAAAACCATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:3722270/148‑1 (MQ=255) cATATCCTTTCGTTTGTTTTCTATTAC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 2:3803089/150‑1 (MQ=255) tCCTGTCGTGTGTTTTAGATTTA‑AAAAAAAAAAGAAAAAATTTTTTTTTAAA‑TATCGAGATAACCATCAC‑AAAAAACAAAAAAATAAAAATAATAGAGGAG‑GGAAAGGCAAAAAAACAGCCACCCCAAAGGGCACCCGTAGCAAAATgcg > 2:533599/1‑150 (MQ=255) tGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAAAGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:4230851/1‑150 (MQ=255) gTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:642447/1‑150 (MQ=255) tCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AATAACGACAATATGAATATTATTCGAGGTG‑TGTAAGGCATATTTTCGGCCTCCCGATTGGGAAGCGGTAGCAAAGTGCGCgtgt > 2:2780553/1‑150 (MQ=255) ttttttttCGATTTC‑AAATTATAATTAATTTTTTTTTTTTTAAA‑TATCGAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:703983/150‑1 (MQ=255) tttgtttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGATATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:2581817/150‑1 (MQ=255) tttgtttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCTAAGTGCGCGTGtttt > 1:1114436/1‑150 (MQ=255) tttttttCTATTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:297519/147‑1 (MQ=255) ttgtttTCTATTAC‑AAAATATAATTAATTTTTTTGTTTTTAAA‑TATCGATATAACTATCAA‑AAACACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:298368/150‑1 (MQ=255) tgtttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:1959418/1‑150 (MQ=255) tttCGATTTC‑AAAATATAATGAAATTTTTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACTGCCTCCCGATAGGGATGCCGTAGCACAGTGCGCGTGTTTTTATGc < 1:3569600/150‑1 (MQ=255) ttCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 1:3965806/1‑150 (MQ=255) ttCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:309875/1‑150 (MQ=255) taTTTA‑AAAAAATAATTAAATTATTTTTTTTTAAT‑TATCTTTATAACTAAAAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 1:1757167/149‑1 (MQ=255) ttC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:325460/1‑150 (MQ=255) | TTGGCAGCGGTTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGC > CP009273/2170565‑2170860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |