Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 2,170,724 | G→T | 30.0% | intergenic (‑41/+267) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 2,170,724 | 0 | G | T | 30.0% | 198.8 / 21.6 | 129 | intergenic (‑41/+267) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
Reads supporting (aligned to +/- strand): ref base G (38/44); new base T (20/22); total (58/71) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 132 total aligned reads displayed.
TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAC > CP009273/2170575‑2170873 | tttCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATg < 2:4151998/150‑1 (MQ=255) ttCTACCACCACTTGCATCGTTTCGAGATTGTGAATCTTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGa < 2:2756196/150‑1 (MQ=255) ccaccaCTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTA‑AAAAAAAAATGTAatta > 2:2147503/1‑150 (MQ=255) caccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACAGTTTCATATCCTGTCGTTTG‑TTTTCGATTTA‑AAAATATAATGTAattat > 2:793541/1‑150 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAattatt < 2:4173377/150‑1 (MQ=255) accacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTA‑AAAATATAAATAAattatt > 2:1658964/1‑150 (MQ=255) ccacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTC‑AAAATATAATGAAAATAttt > 2:1638920/1‑150 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTg < 2:1342413/150‑1 (MQ=255) cacTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTg < 2:710746/150‑1 (MQ=255) acTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGt < 2:2437922/150‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGtt < 2:3283894/150‑1 (MQ=255) cTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGtt < 2:3283940/150‑1 (MQ=255) tGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGtttt < 2:3569604/150‑1 (MQ=255) gCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGttttt < 1:3854856/150‑1 (MQ=255) cATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACATACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTa < 2:3546794/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 1:1408926/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 1:4622173/150‑1 (MQ=255) gTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑ta < 2:1098954/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAa‑tat < 1:3430976/150‑1 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTA‑AAAAAATAAATAAATAATTTTTTTTTAAa‑aat > 1:2712299/1‑150 (MQ=255) tttCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTA‑AAAATAAAAATAAAATATTTTTTTTTAAa‑tat > 2:82879/1‑150 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCgag < 1:552607/150‑1 (MQ=255) gagaTTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGTTTTA‑AAAAAAAAAATAAATTATTTTTTTTTTAa‑tatatag > 1:2473395/1‑146 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATaa < 1:1272623/150‑1 (MQ=255) ttGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATaa < 1:4175409/150‑1 (MQ=255) tgtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAAc < 2:364280/150‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATACCg < 1:1986154/150‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACg < 2:4506432/150‑1 (MQ=255) gtgAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACg < 2:1370862/150‑1 (MQ=255) gAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGAATTC‑AAAATAAAATTAAAATATTTTTTTTTAAA‑TATAGAGATAAAGAt > 2:2247393/1‑150 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTT‑TTTTCGATTTA‑AAAATATTATTAAAATATTTTTTTTTTAA‑TATAGAGATAACCATc > 2:3022389/1‑150 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTT‑TTTTATTTTTG‑AAAATATAATTTAATTATTTTTTTTTAAA‑TATAGATATaaacata > 2:3022383/1‑145 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTG‑AAAATATAAATAAATTATTTGTTTTTTAA‑TATCGAGATAACGCTc > 2:4529536/1‑150 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTC‑AAAATATAATGAAATTATTTTTTTTTTAA‑TATAGATATaaaaata > 2:4529281/1‑145 (MQ=255) aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑AATAGAGATAACGATc > 2:3022367/1‑150 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATcac‑a < 1:4518244/150‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTA‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATAGAGATAAAGATcac‑a > 2:3508692/1‑150 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGAGACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATcac‑a < 1:847443/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTGGATTTA‑AAAATATAAATAAAATATTTTTTTTTTAA‑TATAGAGGTAAAAATAAC‑aaa > 1:3100209/1‑150 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑aaa < 2:9820/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑GTTTGGATTTT‑AAAATATAATGAAAATATTTTTTTTTTAA‑TATAGAGATTACGATCAC‑aaa > 1:3378027/1‑150 (MQ=255) agAATGGCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTCTTAAA‑TATCGAGATAACGATCAC‑aaa < 2:2401356/149‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑aaaaa < 2:2921667/150‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGTTTTT‑AAAATAAAAATAAAATATTTTTTTTTTAA‑TATAGTGATAAAAATAAC‑aaaaa > 1:2943605/1‑150 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTC‑AAAATATAATTAAATTATTTGTTTTTTAA‑TATAGTGTTAAAGATCAC‑aaaaaag > 2:2872050/1‑148 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCTATTTA‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGAc < 2:33034/150‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTA‑AAAATAAAATGAAATTATTTGTTTTTAAA‑TATAGAGATAACGATCAC‑AAAAACGaaa > 2:3440844/1‑148 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGTTTTC‑ATAAAATAAAGTAAAAATTTTTTTTTTTA‑TATAGTGATAAACAACAC‑AAAAAAGACaa > 1:2102703/1‑150 (MQ=255) gCATAACCGCCGCGCTGTGCGTTTTTCTGCATGTGCTTTGTCGATACCACGTACATTTTCTTATCCTGTCGTTTG‑TTTTCTTTTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACTATCAC‑AAAAACGACAATATGaa < 2:4171617/150‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGaa < 2:2365799/150‑1 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTTGATTTA‑AAAAAATAAATAAAATATTTTTTTTTAAA‑TATAGAGATAAACATACA‑AAAAACCACAAAATGaaaa > 2:572249/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTC‑AAAATATAATGTAATTATTTTTTTTTTAA‑TATAGAGATAACGATCAA‑AAAAAAGACAATATGAAAat > 2:4309910/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTA‑AAAATATAATTAAATTATTTTTTTTTAAA‑AATAGAGATAACCCTAAC‑AAAAACGACAAAATTAAAat > 2:1335857/1‑150 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGATTTA‑AAAAAAAAATTAAAATATTTTTTTTTTAA‑AAAATAGGTAACGATAACAAAAAACAACAAAATCAAAattat > 1:4352631/1‑150 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTAGATTTC‑AAAATATAATGAAAATATTTTTTTTTTTA‑TATATAGATAAAGATAAC‑AAAAAAGAAAAAATGAAAattatta > 2:4081506/1‑149 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTAGAATTA‑AAAAAAAAATGAAAATATTTTTTTTTAAA‑AATAGAGATAAAAATAAC‑AAAAAACACAAAATTAAAaatatta > 2:1034741/1‑149 (MQ=255) gcgcTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACTTACATTTTAATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAATTTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCgag < 2:2236514/150‑1 (MQ=255) cGTTGTTCAGCATGTGCTTTGTCTATACCACGAAATTTTTATTATCCTGTGGTTTT‑TTTTGGTTTTA‑AAAATATAATTAATTTTTTTTTTTTTAAA‑TATCGATATAACGAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGaaa < 1:4183096/150‑1 (MQ=255) tgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGTTTTA‑AAAAAATAAATAAAATAATTTTTTTTTAA‑TATAGATATAAACAAAAC‑AAAAAAAACAAAATTAAAAATATTTGAGGAG‑TTTAAGGc > 1:284405/1‑150 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTA‑AAAAAATAATGAAATTATTTTTTTTTTAA‑TATCGAGATAAAGATAAC‑AAAAACGAAAATATTAAAATTATTAGATGAG‑TGAAATGCaa > 2:3579749/1‑150 (MQ=255) tCAGAATCTTTTTTGTCTAAACCACTTAAATTTAAATATCCTGTTTTTTT‑TTTTCTATTAA‑AAAATATAATTAATTTTTTTTTTTTAAAT‑TATCTATAAAACTAAAAA‑AAACACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCaaa < 1:3267233/150‑1 (MQ=255) aGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTGGATTTG‑AAAATATAATGAAATTATTTTTTTTTTAA‑TATAGATATAAAGATAAC‑AAAAAAAACAAAAATAAAATTATTTGAGGGG‑TGTAAGGGaaaaa > 2:2009255/1‑150 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTA‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCTAGATAACCATAAC‑AAAAAAGACAAAATTAAAATTATTCGAGGAT‑TGAAATGCaaaaaaaag > 2:401805/1‑148 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTGGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAAAGATAAC‑AAAAAAGACAATATTAAAATTATTGGTGGAGTTTAAGGGCAAAAAAACgcca > 2:2708306/1‑147 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTAGATTTA‑AAAAAATAATTAAAATATTTTTTTTTTAA‑TAAAGAGATAAAGATCAC‑AAAAAAGAAAAAATGTAAATTATTATAGGAG‑TGTAAGGCaaaaaaaaaggcg > 2:4049904/1‑144 (MQ=255) ttGTCTATACAACGTAATTTTTAATATCGTTTGTTTTT‑TTTTCTTTTTA‑AAAATATATTTAATTTTTTTTTTTTTAAA‑TATCTATATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTcc < 2:1647896/150‑1 (MQ=255) tgacGATACCACTTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATTAATTTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTccc < 2:2343378/147‑1 (MQ=255) tGTCCACACCACCTACATTTTCATATCCTGTGTTTTG‑TTTTCTATTTA‑AAAATATAATTAATTTATTTGTTTTTAAA‑TATCGAGAAAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTccc < 2:2947016/150‑1 (MQ=255) ggtctacaCCACGTACATTTACATATCCTGTCGTTTG‑TTTTCTATTAC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTccc < 2:2342232/143‑1 (MQ=255) aaaCCACTTACTTTTTAATAACCTGTCGTTTG‑TTTTCGATTTA‑AAAATATAATCAATTTATTTTTTTTTAAA‑TATCGAGATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:2471852/148‑1 (MQ=255) aTACCACTTACATTTTAATTTCCTTTCGTTTT‑TTTTCTATTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:2471845/150‑1 (MQ=255) tACCACTTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAgg < 2:3107820/150‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCTATTTA‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAgg < 2:3107848/150‑1 (MQ=255) aCCACGTACATTTTCATATCCTGTCGTTTT‑TTTTAGATTTA‑AAAATATAAATAAAATAATTTTTTTTAAA‑TATAGATATAACAATAAC‑AAAAAAAAAAATAATAAAAATATTAGAGGAG‑TGAAATGCAAAAAAAATGCCACCCGAAAggg > 2:4771283/1‑150 (MQ=255) aCCACGTACAGTTTCATATCCTGTCGTTTG‑TTTTAGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATAGAGATAACGATAAC‑AAAAAACAAAAAAATAAAAATATTCGAGGGG‑TGAAATGGAAAAAAAAGGCCACCCGaaatgg > 2:4771282/1‑145 (MQ=255) aaaTTTTAATTTCTTGTC‑TTTT‑TTTTCATTTTAAAAAATATAAT‑AAATTTTTTTTTTTAAAATTACCTAGAAAACCATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGt < 1:3722270/148‑1 (MQ=255) cATATCCTTTCGTTTG‑TTTTCTATTAC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAg < 2:3803089/150‑1 (MQ=255) tCCTGTCTTTTG‑TTTACGATTAA‑AAAATATAATTAATTTATTTTTTTTTAAA‑TATCTATATAACTACCAA‑AACCACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:2300357/150‑1 (MQ=255) tCCTGTCGTTTG‑TTTTCTATTAA‑AAATTAAAATGAAATTATTTGTTTTTAAA‑TACCGATATAACTAAAAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:4698544/150‑1 (MQ=255) tcgtttgtttgtttTTCTATTAA‑AAATTATATTTAATTTTTTTTTTTTTAAA‑TATCTATAAAAAGAAAAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:151132/144‑1 (MQ=255) tGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTTTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAAAGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgt > 2:4230851/1‑150 (MQ=255) gTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCgtg > 2:642447/1‑150 (MQ=255) tCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AATAACGACAATATGAATATTATTCGAGGTG‑TGTAAGGCATATTTTCGGCCTCCCGATTGGGAAGCGGTAGCAAAGTGCGCgtgt > 2:2780553/1‑150 (MQ=255) tttt‑ttttCGATTTC‑AAATTATAATTAATTTTTTTTTTTTTAAA‑TATCGAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:703983/150‑1 (MQ=255) tttg‑tttTCTATTAC‑AAAATATAATTAATTTATTTGTTTTTAAA‑TATCGAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:1897758/150‑1 (MQ=255) tttg‑tttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCTAAGTGCGCGTGtttt > 1:1114436/1‑150 (MQ=255) tttg‑tttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGAGAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 2:3935929/1‑150 (MQ=255) ttg‑tttTCTATTAC‑AAAATATAATTAATTTTTTTGTTTTTAAA‑TATCGATATAACTATCAA‑AAACACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:298368/150‑1 (MQ=255) ttg‑tttTCGATTTC‑AAAATATAATTAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 2:2218558/150‑1 (MQ=255) tg‑tttTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:1959418/1‑150 (MQ=255) ttttCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACACTATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:1008512/1‑150 (MQ=255) tttCGATTTC‑AAAATATAATGAAATTTTTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACTGCCTCCCGATAGGGATGCCGTAGCACAGTGCGCGTGTTTTTATGc < 1:3569600/150‑1 (MQ=255) ttCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:309875/1‑150 (MQ=255) ttCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 1:3965806/1‑150 (MQ=255) tCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:3432939/1‑150 (MQ=255) ctttttA‑AAAATATATTAAATTTTTTTTTTTTTAAA‑TAGGGATATAACGAAAAC‑AAAAACTACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg < 1:1274561/147‑1 (MQ=255) taTTTA‑AAAAAATAATTAAATTATTTTTTTTTAAT‑TATCTTTATAACTAAAAA‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGa < 1:1757167/149‑1 (MQ=255) atattaaaaaaTATATTTAAATTATTTTTTTTTAAA‑TATCTATAAACCTAACAC‑AAACACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg < 1:1276204/143‑1 (MQ=255) aaaTATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg > 1:1433320/1‑150 (MQ=255) gAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAc > 2:1055292/1‑150 (MQ=255) | TTTCTACCACCACTTGCATCGTTTCGAGATTGTGAATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTC‑AAAATATAATGAAATTATTTGTTTTTAAA‑TATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATAC > CP009273/2170575‑2170873 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |