| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,170,758 | C→A | 11.3% | intergenic (‑75/+233) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,170,758 | 0 | C | A | 11.3% | 413.9 / 4.7 | 155 | intergenic (‑75/+233) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (71/58); new base A (18/8); total (89/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTC > CP009273/2170609‑2170907 | aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTT‑TTTTCGATTTAAAAATATTATTAAAATATTTTTTTTTTAATATAGAGATAACCATc > 2:3022389/1‑150 (MQ=255)aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAAAATAGAGATAACGATc > 2:3022367/1‑150 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac‑a < 1:4518244/150‑1 (MQ=255) atTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGAGACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATcac‑a < 1:847443/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTGGATTTAAAAATATAAATAAAATATTTTTTTTTTAATATAGAGGTAAAAATAAC‑aaa > 1:3100209/1‑150 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑aaa < 2:9820/150‑1 (MQ=255) tGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑GTTTGGATTTTAAAATATAATGAAAATATTTTTTTTTTAATATAGAGATTACGATCAC‑aaa > 1:3378027/1‑150 (MQ=255) agAATGGCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTCTTAAATATCGAGATAACGATCAC‑aaa < 2:2401356/149‑1 (MQ=255) tGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTCAAAATATAATTAAATTATTTGTTTTTTAATATAGTGTTAAAGATCAC‑aaaaaag > 2:2872050/1‑148 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCTATTTAAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGAc < 2:33034/150‑1 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTAAAAATAAAATGAAATTATTTGTTTTTAAATATAGAGATAACGATCAC‑AAAAACGaaa > 2:3440844/1‑148 (MQ=255) ggAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGTTTTCATAAAATAAAGTAAAAATTTTTTTTTTTATATAGTGATAAACAACAC‑AAAAAAGACaa > 1:2102703/1‑150 (MQ=255) aaCCGAATAACCGCCGCGCTGTGCGTTTTTATGATTCTGATTTGTCGATACCACTTAATTTTTCATATCCTGTCTTTTT‑TTTTCTATTTAAAAATATAATTAATTTTTTTTTTTTTAATTATCTTTATAACGATAAA‑AAACACGACAata < 2:1483788/150‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTTTTCTGCATGTGCTTTGTCGATACCACGTACATTTTCTTATCCTGTCGTTTG‑TTTTCTTTTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACTATCAC‑AAAAACGACAATATGaa < 2:4171617/150‑1 (MQ=255) cATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTTTTTTTGAAAAAAAAATGAAAATATTTTTTTTTTAAAATATAGATAAAAAAAAC‑ACAAAACACAATAAGaaa > 1:1283678/1‑150 (MQ=255) aTAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTTGATTTAAAAAAATAAATAAAATATTTTTTTTTAAATATAGAGATAAACATACA‑AAAAACCACAAAATGaaaa > 2:572249/1‑150 (MQ=255) tAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTAGATTTCAAAATATAATGTAATTATTTTTTTTTTAATATAGAGATAACGATCAA‑AAAAAAGACAATATGAAAat > 2:4309910/1‑150 (MQ=255) cgccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGATTTAAAAAAAAAATTAAAATATTTTTTTTTTAAAAAATAGGTAACGATAACAAAAAACAACAAAATCAAAattat > 1:4352631/1‑150 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTCGAATTAAAAATAAAAAGAAATTATTTGTTTTTAAATTTCGAGATAACGATAAA‑AAAAAAGACAATAATAAAaatatta > 2:1034708/1‑149 (MQ=255) gccgcGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTAGAATTAAAAAAAAAATGAAAATATTTTTTTTTAAAAATAGAGATAAAAATAAC‑AAAAAACACAAAATTAAAaatatta > 2:1034741/1‑149 (MQ=255) gcgcTGTGCGTTTTTCAGCATCTGCTTTGTCGATACCACTTACATTTTAATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAATTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCgag < 2:2236514/150‑1 (MQ=255) cGTTGTTCAGCATGTGCTTTGTCTATACCACGAAATTTTTATTATCCTGTGGTTTT‑TTTTGGTTTTAAAAATATAATTAATTTTTTTTTTTTTAAATATCGATATAACGAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑aaa < 1:4183096/150‑1 (MQ=255) ttCAGCATCTGCTTTGTCTATACCACTTACATTTTCATATCCTGTCTTTTG‑TTTTCTATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCaa < 2:2158611/150‑1 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTAGATTTAAAAAAATAATGAAATTATTTTTTTTTTAATATCGAGATAAAGATAAC‑AAAAACGAAAATATTAAAATTATTAGATGAGTG‑AAATGCaa > 2:3579749/1‑150 (MQ=255) tCAGAATCTTTTTTGTCTAAACCACTTAAATTTAAATATCCTGTTTTTTT‑TTTTCTATTAAAAAATATAATTAATTTTTTTTTTTTAAATTATCTATAAAACTAAAAA‑AAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCaaa < 1:3267233/150‑1 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTT‑TTTTAGATTTAAAAAAATAATTAAAATATTTTTTTTTTAATAAAGAGATAAAGATCAC‑AAAAAAGAAAAAATGTAAATTATTATAGGAGTG‑TAAGGCaaaaaaaaaggcg > 2:4049904/1‑144 (MQ=255) ttGTCTTTACCACGTACTTTTTCTTATCCTGTGGTTTG‑TTTTCGTTTTAAAAATATATTTAAATTTTTTGTTTTTAAATATCGAGTTAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTcc < 2:3063059/150‑1 (MQ=255) ttGTCTATACAACGTAATTTTTAATATCGTTTGTTTTT‑TTTTCTTTTTAAAAATATATTTAATTTTTTTTTTTTTAAATATCTATATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTcc < 2:1647896/150‑1 (MQ=255) tgacGATACCACTTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATTAATTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTccc < 2:2343378/147‑1 (MQ=255) tGTCCACACCACCTACATTTTCATATCCTGTGTTTTG‑TTTTCTATTTAAAAATATAATTAATTTATTTGTTTTTAAATATCGAGAAAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTccc < 2:2947016/150‑1 (MQ=255) aaaCCACTTACTTTTTAATAACCTGTCGTTTG‑TTTTCGATTTAAAAATATAATCAATTTATTTTTTTTTAAATATCGAGATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAg < 2:2471852/148‑1 (MQ=255) tACCACTTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAgg < 2:3107820/150‑1 (MQ=255) tACCACGTACATTTTCATATCCTGTCGTGTG‑TTTTGGGTTTAAAAAAATAAATAAAATATTTTTTTTTTAATATAGAGATAAACAACAC‑AAAAAACACAAAATTTAAAATATTAGATGAGTGTAAATGCAAAAAAAC‑GCCACCCGCTAgg > 2:2419680/1‑150 (MQ=255) aCCACGTACATTTTCATATCCTGTCGTTTT‑TTTTAGATTTAAAAATATAAATAAAATAATTTTTTTTAAATATAGATATAACAATAAC‑AAAAAAAAAAATAATAAAAATATTAGAGGAGTG‑AAATGCAAAAAAAATGCCACCCGAAAggg > 2:4771283/1‑150 (MQ=255) aCCACGTACAGTTTCATATCCTGTCGTTTG‑TTTTAGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATAACGATAAC‑AAAAAACAAAAAAATAAAAATATTCGAGGGGTG‑AAATGGAAAAAAAAGGCCACCCGaaatgg > 2:4771282/1‑145 (MQ=255) cACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 2:352624/150‑1 (MQ=255) acttaatttttcttttcCTGTCTTTTT‑TTTTCTATTTAAAAATATAATTAATTTTTTTTTTTTAAAATATCTATATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:660362/143‑1 (MQ=255) tACATTTTCATATCCTGTCGTGTT‑TTTTGGATTTGAAAAAATAATGAAAATATTTTTTTTTTAATATAGAGTTTAAGATAAC‑AAAAAAGAAAATATTAAAAATATTAGAGGGGTG‑TAATGCAAAAAAAAATCCTCCCCAAAGGGAAGCCg > 2:3695832/1‑150 (MQ=255) tCCTGTCTTTTG‑TTTACGATTAAAAAATATAATTAATTTATTTTTTTTTAAATATCTATATAACTACCAA‑AACCACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:2300357/150‑1 (MQ=255) tCCTGTCGTTTG‑TTTTCTATTAAAAATTAAAATGAAATTATTTGTTTTTAAATACCGATATAACTAAAAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:4698544/150‑1 (MQ=255) tcgtttgtttgtttTTCTATTAAAAATTATATTTAATTTTTTTTTTTTTAAATATCTATAAAAAGAAAAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTgcg < 1:151132/144‑1 (MQ=255) tCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AATAACGACAATATGAATATTATTCGAGGTGTG‑TAAGGCATATTTTCGGCCTCCCGATTGGGAAGCGGTAGCAAAGTGCGCgtgt > 2:2780553/1‑150 (MQ=255) tttt‑ttttCGATTTCAAATTATAATTAATTTTTTTTTTTTTAAATATCGAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:703983/150‑1 (MQ=255) tttg‑tttTCTATTACAAAATATAATTAATTTATTTGTTTTTAAATATCGAGATAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 1:1897758/150‑1 (MQ=255) tttg‑tttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGATATAACGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt < 2:2581817/150‑1 (MQ=255) tttttttCTATTTCAAAATATAATTAAATTATTTGTTTTTAAATATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttttt < 1:297519/147‑1 (MQ=255) tg‑tttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTa > 2:1959418/1‑150 (MQ=255) tttCTATTTAAAAATATAATTAAATTATTTTTTTTTAAATATCGAGATAACTATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGc < 1:3569602/150‑1 (MQ=255) tttCGATTTCAAAATATAATGAAATTTTTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACTGCCTCCCGATAGGGATGCCGTAGCACAGTGCGCGTGTTTTTATGc < 1:3569600/150‑1 (MQ=255) ttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGcc > 2:309875/1‑150 (MQ=255) tCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCg > 2:3432939/1‑150 (MQ=255) atattaaaaaaTATATTTAAATTATTTTTTTTTAAATATCTATAAACCTAACAC‑AAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg < 1:1276204/143‑1 (MQ=255) ttCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGc > 2:325460/1‑150 (MQ=255) attaaaTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 2:3082534/147‑1 (MQ=255) atgattttattTGTTTTTAAATATCTAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt < 1:260696/144‑1 (MQ=255) aatttattTGTTTTTAAATATCGATATACCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg < 1:3471015/147‑1 (MQ=255) aaaTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 2:3943892/1‑150 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:245791/1‑150 (MQ=255) attattTGTTTTTAAATATCGATATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg < 2:1129690/150‑1 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:4452528/1‑150 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:4467328/1‑150 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:782615/1‑150 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:782836/1‑150 (MQ=255) attattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTg > 1:916589/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:3360421/1‑150 (MQ=255) tattTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc > 2:2879842/1‑150 (MQ=255) attTTTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCa < 2:854966/150‑1 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 1:2322922/1‑150 (MQ=255) tttGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 1:4553864/1‑150 (MQ=255) attGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg > 1:2278748/2‑150 (MQ=255) tGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg > 1:1201929/1‑150 (MQ=255) gTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGc > 1:385333/1‑150 (MQ=255) ttttAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTa > 1:891551/1‑150 (MQ=255) tttAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 2:1268917/1‑150 (MQ=255) tttAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 1:4505078/1‑150 (MQ=255) tAATTATCTAGATAACTATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt < 1:1034741/150‑1 (MQ=255) tAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGt > 2:1218337/1‑150 (MQ=255) aaaTATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCCAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTa < 2:647428/150‑1 (MQ=255) atatCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAgg > 2:1258228/1‑150 (MQ=255) atCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 2:4132974/1‑150 (MQ=255) tCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AACGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt < 2:3887111/150‑1 (MQ=255) tCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt > 2:1492185/1‑150 (MQ=255) ctataTAACTAACAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATg < 1:4529511/146‑1 (MQ=255) gaTAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATa > 1:1014705/1‑150 (MQ=255) aTAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa > 1:3716625/1‑150 (MQ=255) aaCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:1581894/1‑150 (MQ=255) aaCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa > 1:1748857/1‑150 (MQ=255) aCGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc < 1:2741374/150‑1 (MQ=255) aCGATCAA‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc < 1:349217/150‑1 (MQ=255) gATCAC‑AAAAACGACAATATGAAAATTATTCGAGGCGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGTCGc > 2:682800/1‑150 (MQ=255) gATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:2165183/1‑150 (MQ=255) gATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:199103/1‑150 (MQ=255) aTCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCt > 1:3926092/1‑150 (MQ=255) tCAC‑AAACACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt < 2:3984243/150‑1 (MQ=255) tCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt > 1:2021567/1‑150 (MQ=255) tCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCtt > 1:2525028/1‑150 (MQ=255) cac‑aAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTc > 1:2942210/1‑150 (MQ=255) cac‑aAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTc > 1:3061752/1‑150 (MQ=255) cac‑aAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTc > 2:2278098/1‑150 (MQ=255) cac‑aAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTc > 1:2928845/1‑150 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTG‑TTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACGATCAC‑AAAAACGACAATATGAAAATTATTCGAGGAGTG‑AAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTC > CP009273/2170609‑2170907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |