| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,576,325 | C→A | 90.4% | E171D (GAG→GAT) | nudK ← | GDP‑mannose pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,576,325 | 0 | C | A | 90.4% | 784.3 / 76.4 | 270 | E171D (GAG→GAT) | nudK | GDP‑mannose pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (17/9); new base A (140/104); total (157/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 273 total aligned reads displayed.
GTATCTTCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTCACACCGCC > CP009273/2576178‑2576471 | tATCTTCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCg < 1:1006473/150‑1 (MQ=255) tATCTTCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCg < 1:1006370/150‑1 (MQ=255) ttCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCgg > 1:3299873/1‑150 (MQ=255) ttCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCgg > 1:3575917/1‑150 (MQ=255) gTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGttt > 2:2854457/1‑150 (MQ=255) tGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTg < 1:1472020/150‑1 (MQ=255) gcgcAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACAGTCACGTATATCGCCGGATTTGa > 2:3412151/1‑150 (MQ=255) cgcAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGat < 2:1434740/150‑1 (MQ=255) gcAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGatc < 2:3237069/150‑1 (MQ=255) gTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATAAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCAtct > 2:1029376/1‑150 (MQ=255) aGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTcc < 1:2990413/150‑1 (MQ=255) cgcgGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAg < 2:4645393/150‑1 (MQ=255) cAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTgg > 1:1086521/1‑150 (MQ=255) aTTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACg > 2:2168275/1‑150 (MQ=255) ggATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTc < 2:1230379/150‑1 (MQ=255) ggATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTc < 2:2974214/150‑1 (MQ=255) ggATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTc < 1:466678/150‑1 (MQ=255) ttGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTCAATGTGACGTTTGCAAAGAGTTAAGCAAGAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAg < 2:703996/150‑1 (MQ=255) gAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCa < 2:639715/150‑1 (MQ=255) gCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACt < 2:4698713/150‑1 (MQ=255) cAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTc > 2:4460390/1‑150 (MQ=255) aataatAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCa > 1:4115306/1‑150 (MQ=255) aataaACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAata > 2:2255701/1‑150 (MQ=255) aataaACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAata > 1:1403529/1‑150 (MQ=255) ataaACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGTTCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAatat > 1:552398/1‑150 (MQ=255) ataaACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAatat > 2:4223204/1‑150 (MQ=255) ataaACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAatat < 1:4646462/150‑1 (MQ=255) aaaCAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatct > 1:4077088/1‑150 (MQ=255) aacaacGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTCTATCGCCGGTGTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatctt > 2:2921674/1‑150 (MQ=255) aacaacGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatctt < 2:1263013/150‑1 (MQ=255) aacGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatcttcat > 1:395424/1‑150 (MQ=255) acGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatcttcatc > 1:371443/1‑150 (MQ=255) cGAAATATTATTGTTTTTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatcttcatct < 2:4004422/150‑1 (MQ=255) gAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatcttcatctt < 1:2854457/150‑1 (MQ=255) aaaTATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATatcttcatcttc < 1:1913687/150‑1 (MQ=255) tattatTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGac < 1:4033828/150‑1 (MQ=255) tattatTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGac < 1:1277805/150‑1 (MQ=255) attattGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGaca < 2:3112095/150‑1 (MQ=255) attattGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGaca < 2:2054576/150‑1 (MQ=255) attGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCg > 2:4769949/1‑150 (MQ=255) attGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCg > 1:216861/1‑150 (MQ=255) gTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTGCAGCGCCTGGCAGAACCGCAGCTCGAGCACTTCAATATATTCATCATCGACACCCCCa > 1:1595172/1‑150 (MQ=255) gTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCa < 1:3433714/150‑1 (MQ=255) gTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCa > 2:1823480/1‑150 (MQ=255) ttATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCAc > 1:4450833/1‑150 (MQ=255) ttATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTAGACACCGCCAc > 2:948950/1‑150 (MQ=255) tATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACCCCGCcccc > 1:1210647/1‑150 (MQ=255) aTTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCg > 1:1702167/1‑150 (MQ=255) tttttCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCgg < 2:1631524/150‑1 (MQ=255) ttttCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGc > 1:3531728/1‑150 (MQ=255) ttCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGt > 2:1115316/1‑150 (MQ=255) tCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGtt < 1:1522163/150‑1 (MQ=255) tCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGtt < 2:290560/150‑1 (MQ=255) aGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAg > 2:2376689/1‑150 (MQ=255) aGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAg > 1:4074546/1‑150 (MQ=255) ccATTAAATGTGACGTTTGCAAATAGTTATGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAgcgc < 1:2314559/150‑1 (MQ=255) ccATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAgcgc < 1:122157/150‑1 (MQ=255) cATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAgcgcg > 1:339200/1‑150 (MQ=255) tAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTg < 2:3889718/150‑1 (MQ=255) tAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTg < 1:2060302/150‑1 (MQ=255) tAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTg > 1:1490510/1‑150 (MQ=255) aTGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGAtt < 1:1713679/150‑1 (MQ=255) aTGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGAtt < 2:3572293/150‑1 (MQ=255) aTGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGAtt > 1:2303400/1‑150 (MQ=255) tgtgACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTg < 2:3672574/150‑1 (MQ=255) gTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTg < 1:3029235/150‑1 (MQ=255) tttGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGt < 2:483474/150‑1 (MQ=255) ttGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTa < 1:3867204/150‑1 (MQ=255) tGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTAt < 1:1029376/150‑1 (MQ=255) gCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCCGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTAtt > 2:1617004/1‑150 (MQ=255) gCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTAtt > 1:2535128/1‑150 (MQ=255) gCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTAtt > 1:2740148/1‑150 (MQ=255) gCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAAGATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTAtt < 2:1937848/150‑1 (MQ=255) aaaTAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCg > 2:3810567/1‑150 (MQ=255) aaaTAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCg > 2:131237/1‑150 (MQ=255) aaaTAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCg > 1:1326568/1‑150 (MQ=255) aTAGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGc > 2:1290088/1‑150 (MQ=255) aGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGa > 2:3711047/1‑150 (MQ=255) aGTTAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGa < 1:4256524/150‑1 (MQ=255) ttAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATa > 1:2127849/1‑150 (MQ=255) ttAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTGTTGATCATCTCCAGCGCCTGGCTGAACGGCCGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCGGATTGTAACTGTATTCGGCGGTa > 1:1654900/1‑150 (MQ=255) tAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATaa > 2:2556986/1‑150 (MQ=255) tAAGCAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATaa > 2:15937/1‑150 (MQ=255) aaGCAATAACACCGTCTTACCGTCACGTATATCGCCGGGTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCGGATTGTCACTGTATTCGGCGATaaa > 1:971234/1‑150 (MQ=255) cAATAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATaaaaaa > 1:4591832/1‑150 (MQ=255) aaTAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATaaaaaaa < 1:3815211/150‑2 (MQ=255) aaTAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATATCCAGCGCCTGGCTGAAAGGCAGCTCGAGCACTTCAATATATTCATATTCGACACCGCCACCGGCGTTATCGCGCGGATTGTAACTGTTTTCGGCGATaaaaaat > 1:3204996/1‑149 (MQ=255) aTAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGt < 2:2440895/150‑1 (MQ=255) aTAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCGCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGt > 1:2170633/1‑150 (MQ=255) tAACACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTg > 1:732401/1‑150 (MQ=255) aaCACCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTgg < 2:2367611/150‑1 (MQ=255) acacCGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCCGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGa > 1:2339689/1‑150 (MQ=255) cGTCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCCGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAg > 1:648348/1‑150 (MQ=255) tCTTACCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCt < 1:91699/150‑1 (MQ=255) cTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTc < 1:395619/150‑1 (MQ=255) aCCGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGt < 1:2693133/150‑1 (MQ=255) cGTCACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTca < 1:2294856/150‑1 (MQ=255) cACGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTCacac > 2:3134072/1‑150 (MQ=255) cGTATATCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTCACACCg < 1:970185/150‑1 (MQ=255) tataTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTCACACCGcc > 2:564702/1‑150 (MQ=255) | GTATCTTCGTTGCGCAGGTAGCGCGGCTCAATCGGATTTGTCGGATTGAGCCAATAATAAACAACGAAATATTATTGTTATTTTTCAGTCCATTAAATGTGACGTTTGCAAATAGTTAAGCAATAACACCGTCTTACCGTCACGTATCTCGCCGGTTTTGATCATCTCCAGCGCCTGGCTGAACGGCAGCTCGAGCACTTCAATATCTTCATCTTCGACACCGCCACCGGCGTTAGCGCGCTGATTGTCACTGTATTCGGCGATAAAAAAGTGGATTAGCTCAGTCACACCGCC > CP009273/2576178‑2576471 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |