| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,914,100 | C→A | 5.4% | A2A (GCG→GCT) | gudX ← | glucarate dehydratase‑related protein, substrate unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,914,100 | 0 | C | A | 5.4% | 1224.3 / 30.4 | 314 | A2A (GCG→GCT) | gudX | glucarate dehydratase‑related protein, substrate unknown |
| Reads supporting (aligned to +/- strand): ref base C (141/156); new base A (13/4); total (154/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.43e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
CCAATGCCGGTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAA > CP009273/2913951‑2914249 | cAATGCCGGTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCg > 2:2312402/1‑150 (MQ=255) tGCCGGTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCa < 2:4060016/150‑1 (MQ=255) ccGGTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATc < 1:4244121/150‑1 (MQ=255) gTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTa < 2:2908392/150‑1 (MQ=255) aTGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTAtt < 1:697923/150‑1 (MQ=255) aTGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTAtt < 2:4020534/150‑1 (MQ=255) aTGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTAtt < 2:3764055/150‑1 (MQ=255) tGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTg < 1:72637/150‑1 (MQ=255) tGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTg < 1:3065371/150‑1 (MQ=255) tGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTg < 1:3044759/150‑1 (MQ=255) cGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGcccc < 2:2096550/150‑1 (MQ=255) aTCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAg < 1:4378113/150‑1 (MQ=255) cGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGt > 2:1162439/1‑150 (MQ=255) cGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGt < 2:2590908/150‑1 (MQ=255) gTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGttt < 2:741996/150‑1 (MQ=255) gTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGttt > 1:3070095/1‑150 (MQ=255) gTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGttt < 2:423941/150‑1 (MQ=255) aGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCaa < 2:1454568/150‑1 (MQ=255) aGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCaa < 2:3551289/150‑1 (MQ=255) tACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACt > 1:3312164/1‑150 (MQ=255) tACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACt < 1:1482023/150‑1 (MQ=255) cacaATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGa > 2:2459359/1‑150 (MQ=255) caATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATa < 2:4704535/150‑1 (MQ=255) caATAGTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATa < 2:1764072/150‑1 (MQ=255) aaTATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATAc < 1:824853/150‑1 (MQ=255) atatTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACg < 1:2624285/150‑1 (MQ=255) atTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCt > 1:1620646/1‑150 (MQ=255) tGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTg < 2:287569/150‑1 (MQ=255) tGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTg > 1:4285194/1‑150 (MQ=255) tGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTg > 1:2679343/1‑150 (MQ=255) cGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGat < 1:1354320/150‑1 (MQ=255) aaTATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGccc > 2:3901494/1‑150 (MQ=255) tatGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccac < 2:484691/150‑1 (MQ=255) tatGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccac > 1:4157921/1‑150 (MQ=255) atGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccacc > 2:1999595/1‑150 (MQ=255) atGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCAGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccacc > 2:23951/1‑150 (MQ=255) tGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccacca < 1:3979219/150‑1 (MQ=255) tGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccacca < 2:3708936/150‑1 (MQ=255) tGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCccacca < 1:4773692/150‑1 (MQ=255) aTGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCcaccagcacca < 1:4501220/150‑1 (MQ=255) aTGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCcaccagcacca < 1:621466/150‑1 (MQ=255) tgtgCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCcaccagcaccag > 1:4589030/1‑150 (MQ=255) tgCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGt < 2:142751/150‑1 (MQ=255) tgCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGt > 1:2835030/1‑150 (MQ=255) gCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTa < 2:1637910/150‑1 (MQ=255) ccccACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAg < 2:2812721/150‑1 (MQ=255) caccaATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTc > 1:4013388/1‑150 (MQ=255) aaTATTAAGCAACATGCTGTCATGCCCGGCCACCGGAAAGACTTTCATATCAGTAATAACAGGACTGGATTGAGTCGCCATCTTATTGCCCCGCACCAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTa > 2:3104463/1‑150 (MQ=255) tatTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTAcc < 2:172430/150‑1 (MQ=255) aaGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGa > 1:4673516/1‑150 (MQ=255) aaGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGa > 2:4437998/1‑150 (MQ=255) cAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTa < 2:770569/150‑1 (MQ=255) aaCATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTaa > 1:2159896/1‑150 (MQ=255) aaCATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTaa < 1:3827112/150‑1 (MQ=255) aaCATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGAGACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTaa < 2:1710681/150‑1 (MQ=255) cATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAgg > 2:4499161/1‑150 (MQ=255) aTGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGc > 1:1034311/1‑150 (MQ=255) tCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAac < 2:3443386/150‑1 (MQ=255) tCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAac > 1:2903953/1‑150 (MQ=255) cATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTAGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAaca > 2:1342072/1‑150 (MQ=255) cATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTAGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAaca > 2:2894071/1‑150 (MQ=255) aTGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAacac > 1:1712817/1‑150 (MQ=255) aTGCCCGGCCACCGGAATGACTTTCATATCAGAAATAACAGGACTGGATAGAGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAacac > 1:988933/1‑150 (MQ=255) tGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACAcc > 2:2936404/1‑150 (MQ=255) cGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACa < 2:4684761/150‑1 (MQ=255) gCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATa < 1:2553918/150‑1 (MQ=255) ccACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATaa < 1:2080762/150‑1 (MQ=255) ccACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATaa < 1:3444933/150‑1 (MQ=255) aCCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAAt > 1:3012729/1‑150 (MQ=255) cGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCa > 1:870194/1‑150 (MQ=255) cGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCa > 1:1066397/1‑150 (MQ=255) aaTGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAgcg < 2:3877119/150‑1 (MQ=255) aaTGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAgcg > 1:2950325/1‑150 (MQ=255) aTGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAgcgc > 1:3625863/1‑150 (MQ=255) tGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGcc < 2:3600673/150‑1 (MQ=255) tGACTTTCATATCAGTAATAACAGGACTGGATTGTGTAGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGcc > 2:3663299/1‑150 (MQ=255) aCTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGcccc < 2:1907428/150‑1 (MQ=255) atatCAGTAATATCAGGAGTGGATTGTGTCGCCATCTTTTTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTaaa < 2:217351/150‑1 (MQ=255) atatCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTaaa > 2:3667038/1‑150 (MQ=255) tatCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAAc > 1:2503677/1‑150 (MQ=255) taataaCAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCa > 2:3226540/1‑150 (MQ=255) taataaCAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCa > 2:433501/1‑150 (MQ=255) ataaCAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGt < 1:3106760/150‑1 (MQ=255) taaCAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTc > 1:3792807/1‑150 (MQ=255) aCAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGt < 2:3312164/150‑1 (MQ=255) cAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTg > 2:2502420/1‑150 (MQ=255) ggACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGcc < 1:1154125/150‑1 (MQ=255) aCTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCaa < 2:3070095/150‑1 (MQ=255) cTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAAc > 2:659089/1‑150 (MQ=255) tGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACg > 2:2130593/1‑150 (MQ=255) ggATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGa > 1:1964059/1‑150 (MQ=255) ggATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGa > 2:4591520/1‑150 (MQ=255) gATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGat < 1:2283530/150‑1 (MQ=255) gATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGat < 2:2193619/150‑1 (MQ=255) aTTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGata < 1:2097399/150‑1 (MQ=255) ttGTGTAGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGatat < 2:4597789/150‑1 (MQ=255) tgtgTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGAtata < 1:3723804/150‑1 (MQ=255) gtCGCCATCTTATTGCCCCGCAACAGGTTTCCACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAAcc < 1:3894975/150‑1 (MQ=255) tCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCa > 2:2694938/1‑150 (MQ=255) cGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCaa > 1:1538902/1‑150 (MQ=255) | CCAATGCCGGTATGCCCGGCGTTATCGGTGAGTACCACAATATTGCGGGTGAAATATGCGTTATGTGCCCCACCAATATTAAGCAACATGCTGTCATGCCCGGCCACCGGAATGACTTTCATATCAGTAATAACAGGACTGGATTGTGTCGCCATCTTATTGCCCCGCAACAGGTTTCAACTCGATACGCTTGATATCGCCCACCAGCACCAGGTAGCTCAGTACCGCGATTAAGGCATGAACACCAACATAAATCAGCGCCCCATTAAACGAGCCAGTCGTGCCAACGATATAACCAA > CP009273/2913951‑2914249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |