| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,022,888 | C→A | 8.0% | R468L (CGG→CTG) | ygfT ← | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,022,888 | 0 | C | A | 8.0% | 1292.9 / 57.2 | 345 | R468L (CGG→CTG) | ygfT | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (171/146); new base A (10/18); total (181/164) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.63e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 357 total aligned reads displayed.
CACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGGC > CP009273/3022739‑3023037 | cacaAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTcc > 2:543756/1‑150 (MQ=255) acaAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCg < 1:1041970/150‑1 (MQ=255) acaAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCg < 1:93979/150‑1 (MQ=255) caAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGc > 2:3072015/1‑150 (MQ=255) aaGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCa < 2:2066460/150‑1 (MQ=255) aaGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCa < 2:4469777/150‑1 (MQ=255) cGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAAc < 1:3185435/150‑1 (MQ=255) cGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAAc > 2:3204512/1‑150 (MQ=255) gATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACa < 2:1487284/150‑1 (MQ=255) gATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACa > 1:1196132/1‑150 (MQ=255) gATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACa > 2:295546/1‑150 (MQ=255) atatTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATc < 2:2157773/150‑1 (MQ=255) ttGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCAt < 2:2384323/150‑1 (MQ=255) tGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCAtt < 1:18992/150‑1 (MQ=255) cGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGt < 2:692515/150‑1 (MQ=255) gTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCg > 2:4402301/1‑150 (MQ=255) ttGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGt < 1:1453412/150‑1 (MQ=255) gAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTAt < 1:3235330/150‑1 (MQ=255) aaCATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATc < 2:94373/150‑1 (MQ=255) aaCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCg > 2:4711940/1‑150 (MQ=255) aCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGc < 2:4091967/150‑1 (MQ=255) aCTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGc > 1:3145202/1‑150 (MQ=255) aCTGAAACTCGACACCTTCCTCGCGCGCATGAACCACGTCTGTGCGCGAGCCCGGCATACTGACTTCATCTCGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATGGTCGTATCGCCACCGc < 2:1687531/150‑1 (MQ=255) tGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGccc > 1:3563440/1‑150 (MQ=255) aaaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCaa > 1:835027/1‑150 (MQ=255) aaaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCaa > 2:1619553/1‑150 (MQ=255) aaaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCaa > 2:620517/1‑150 (MQ=255) aaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAAt > 2:590819/1‑150 (MQ=255) aaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAAt > 2:1831333/1‑150 (MQ=255) aaCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAAt > 2:3642866/1‑150 (MQ=255) aCTCGACACCTTCCTCGCGCGCATTAACCACCTCTTGGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATa < 1:1813475/150‑1 (MQ=255) cacCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGa > 2:2746447/1‑150 (MQ=255) acCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGAc > 2:491427/1‑150 (MQ=255) cTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTc > 2:2743575/1‑150 (MQ=255) tCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTa > 1:3723718/1‑150 (MQ=255) cgcgcgCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTAc > 1:2748176/1‑150 (MQ=255) cgcgcgCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTAc > 1:1960381/1‑150 (MQ=255) cgcgcgCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTAc < 1:3015914/150‑1 (MQ=255) gcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTcc < 2:251696/150‑1 (MQ=255) gcATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTcc > 2:3121984/1‑150 (MQ=255) cATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCa > 1:4472954/1‑150 (MQ=255) cATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCa > 2:1549491/1‑150 (MQ=255) aTTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAc < 2:3241980/150‑1 (MQ=255) aaCCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCAcgtc < 2:458588/150‑1 (MQ=255) ccTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCa < 2:3739136/150‑1 (MQ=255) ctctTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAg > 1:806158/1‑150 (MQ=255) tctTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGc > 1:1114079/1‑150 (MQ=255) gcgcGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa < 1:2189400/150‑1 (MQ=255) gcgcGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa < 1:2560087/150‑1 (MQ=255) gcgcGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa < 2:2624874/150‑1 (MQ=255) gcgcGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa < 1:4513913/150‑1 (MQ=255) cgcgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAc < 1:1727930/150‑1 (MQ=255) gcgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGTTGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAct < 2:1005488/150‑1 (MQ=255) gcgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAct > 2:3566212/1‑150 (MQ=255) gcgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAct > 1:343996/1‑150 (MQ=255) cgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActc > 1:1302514/1‑150 (MQ=255) cgAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActc > 1:4576241/1‑150 (MQ=255) gAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActct < 1:413184/150‑1 (MQ=255) gAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActct > 1:4179772/1‑150 (MQ=255) gAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActct < 1:1504291/150‑1 (MQ=255) aGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCtt > 2:4531708/1‑150 (MQ=255) aGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCtt > 1:360864/1‑150 (MQ=255) cccGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCa < 1:1634174/150‑1 (MQ=255) cGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGa > 1:2611658/1‑150 (MQ=255) ggCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGAc > 1:1835515/1‑150 (MQ=255) aTACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTcc > 2:3977743/1‑150 (MQ=255) tACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCg < 1:2874586/150‑1 (MQ=255) cTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGc > 1:29345/1‑150 (MQ=255) gACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCaa > 2:4180769/1‑150 (MQ=255) aCTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAAt < 2:1455136/150‑1 (MQ=255) ttCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 2:1280281/150‑1 (MQ=255) ttCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 2:2934171/150‑1 (MQ=255) ttCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 1:893759/150‑1 (MQ=255) tcaCGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATg > 1:2320002/1‑150 (MQ=255) caCGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGa > 2:2451079/1‑150 (MQ=255) gacgaTACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCt > 1:586342/1‑150 (MQ=255) aTACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGATGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCATTACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGTCTCCGGCAATCCCATGAGCTGGCg < 2:1601207/150‑1 (MQ=255) aTACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCg < 2:3485938/150‑1 (MQ=255) aTACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCAACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCg < 2:1353660/150‑1 (MQ=255) aCGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCggg < 2:715210/150‑1 (MQ=255) cgcgCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGt < 1:17556/150‑1 (MQ=255) cgcAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTAt < 2:1153616/150‑1 (MQ=255) cAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATgg > 2:3848773/1‑150 (MQ=255) tCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAg > 1:325127/1‑150 (MQ=255) aCGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATCCCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTc < 1:4696426/150‑1 (MQ=255) aCGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTc < 2:1944882/150‑1 (MQ=255) gcggcATTGAGGCTGATGGAAGTCAGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAAc < 2:1145094/150‑1 (MQ=255) gcggcATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAAc < 2:4043039/150‑1 (MQ=255) ggcATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATCCCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACgg < 1:4061139/150‑1 (MQ=255) ggcATTGAGGCGGATGGAAGTCCGCAAACAATCCATGGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACgg < 1:1656523/150‑1 (MQ=255) gcATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGt < 2:4434051/150‑1 (MQ=255) ttGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTaga < 1:481571/150‑1 (MQ=255) gAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGc < 2:3801554/150‑1 (MQ=255) ggATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGaa > 2:2336314/1‑150 (MQ=255) gATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAt < 1:1549990/150‑1 (MQ=255) aTGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATg < 1:3072015/150‑1 (MQ=255) tGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGa > 2:1391800/1‑150 (MQ=255) tGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGa > 1:3851972/1‑150 (MQ=255) cGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGgc < 2:1928767/150‑1 (MQ=255) cGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGgc < 1:517674/150‑1 (MQ=255) | CACAAGCGATATATTGCGGTTGAACATTGAACTGAAACTCGACACCTTCCTCGCGCGCATTAACCACCTCTTTGCGCGAGCCCGGCATACTGACTTCATCACGACGATACGCGCAGGTCACGCTGGCGGCATTGAGGCGGATGGAAGTCCGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAATGACACCGGGC > CP009273/3022739‑3023037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |