| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,110,751 | C→A | 93.3% | R574L (CGT→CTT) | yghJ ← | DUF4092 family putative lipoprotein peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,110,751 | 0 | C | A | 93.3% | 816.7 / 34.4 | 284 | R574L (CGT→CTT) | yghJ | DUF4092 family putative lipoprotein peptidase |
| Reads supporting (aligned to +/- strand): ref base C (6/15); new base A (134/127); total (140/144) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 287 total aligned reads displayed.
CTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACG > CP009273/3110604‑3110898 | cTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGc > 2:3619234/1‑150 (MQ=255) tGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCa > 2:918489/1‑150 (MQ=255) tGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCa > 2:1423124/1‑150 (MQ=255) ggCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCaa > 1:1041905/1‑150 (MQ=255) ggCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCaa < 1:4730281/150‑1 (MQ=255) gCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGgcaaagcaaa < 1:3148137/150‑1 (MQ=255) gTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCtgtt < 2:3429338/150‑1 (MQ=255) gTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCtgtt < 2:4165324/150‑1 (MQ=255) tCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCtgttg > 1:2354650/1‑150 (MQ=255) cGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTa > 1:4548470/1‑150 (MQ=255) ggCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAg < 1:439075/150‑1 (MQ=255) ggCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAg > 2:1064110/1‑150 (MQ=255) ggCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACAGCCCATATTTATTAACCCCCCCCTTCCAGCTGTAACCCATCGGGCAAAGCAAAAT‑GCTGTTGTat > 1:3494466/1‑149 (MQ=255) ggCGTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAACAT‑GCTGTTGTAg < 2:2509420/150‑1 (MQ=255) tCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGtgtg > 2:1034447/1‑150 (MQ=255) tCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGtgtg > 1:3486508/1‑150 (MQ=255) ccATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTgg < 1:1698913/150‑1 (MQ=255) ttATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTa > 2:3859942/1‑150 (MQ=255) aTCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTAcc < 1:1956412/150‑1 (MQ=255) tcgtcgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTTCCCATATTTATTAACGCCCCCGTTCCAGCTGTAAACGTTCGGGCAAAGCACAAT‑GCTGTTGTAGTGTGGGTTACCg > 1:265893/1‑150 (MQ=255) tcgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATa > 1:4176574/1‑150 (MQ=255) cgGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATaa > 1:1324629/1‑150 (MQ=255) aGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGGAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATc < 2:2595730/150‑1 (MQ=255) gATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCa < 1:766244/150‑1 (MQ=255) aTAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAg > 1:2535413/1‑150 (MQ=255) tAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGt < 2:4466663/150‑1 (MQ=255) gcgcAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGttt < 2:2089656/150‑1 (MQ=255) gcgcAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGttt < 2:4429563/150‑1 (MQ=255) cgcAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAAAGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTg > 1:4417985/1‑150 (MQ=255) agcaCGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGccc < 1:3048675/150‑1 (MQ=255) cGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCAc > 1:4698567/1‑150 (MQ=255) gTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCAcc < 1:1423080/150‑1 (MQ=255) gTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCAcc < 1:1423236/150‑1 (MQ=255) ctcCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGAc < 1:309163/150‑1 (MQ=255) cATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTg > 2:2054631/1‑150 (MQ=255) aTGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGc > 2:1751059/1‑150 (MQ=255) gAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGGGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGccc > 2:1137767/1‑150 (MQ=255) aaGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGcccc > 2:2287982/1‑150 (MQ=255) aaGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGcccc > 2:715590/1‑150 (MQ=255) aGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCa < 1:1146361/150‑1 (MQ=255) gTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAg > 1:3177963/1‑150 (MQ=255) tcttcATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCg > 2:8271/1‑150 (MQ=255) gtGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATa < 2:391338/149‑1 (MQ=255) tCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGc < 2:3103201/150‑1 (MQ=255) tCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGc < 2:3102462/150‑1 (MQ=255) cGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAg > 1:754851/1‑150 (MQ=255) ggTCGGTGTTGAGCGTACACTGCCCATTTTTATTAACGCCCCCGTTCCTGCTGTAACGGTTGGGGCAAATCAAATT‑GCTGTTGTTGTGTGGGTTACCTATAACCTTAATTTTGCCCTCACCGAGTTGCCCCAGCGAAATAAACGGCAGGt < 1:1527290/150‑1 (MQ=255) gTCGGTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCTTTCGGGCAAAGCAAAAT‑GCTGTTGTTGTGTGGGTTACCGATAACCATCTTTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGtt < 2:585919/150‑1 (MQ=255) cGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTaa < 2:1559323/150‑1 (MQ=255) cGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGAAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTaa < 2:3964921/150‑1 (MQ=255) tGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTACCCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAgg < 2:4140349/150‑1 (MQ=255) tGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAgg > 1:599786/1‑150 (MQ=255) ggTTGAGCGTACACGGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAATG‑GCTGTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAgg < 2:200787/149‑1 (MQ=255) tGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTgg > 1:4440749/1‑150 (MQ=255) tGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTgg > 1:3357154/1‑150 (MQ=255) cGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGt < 2:3342502/150‑1 (MQ=255) cGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGt > 2:2400797/1‑150 (MQ=255) cacTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcg < 2:2787363/150‑1 (MQ=255) tGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGAAAAAT‑GCTGTTGTAGTGTGGGTTACCTATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcgcgc < 1:2749776/150‑1 (MQ=255) gCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATcgcgcg > 2:562330/1‑150 (MQ=255) cccATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGt > 1:4281946/1‑150 (MQ=255) ccATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTa > 1:406275/1‑150 (MQ=255) caaTCTTTATTACCGCCCCCGTTCCAGCTGTCCCCGTGGGGGAAATGAAATTT‑GTTGTTGTTGTGTGGGTTACCTATACCATTCTGTTGGCCCACACCGAGTTCCCCCAGCGAAAAACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTa < 1:905836/148‑1 (MQ=255) aTCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAAc > 1:1018802/1‑150 (MQ=255) aTCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAAc > 2:3564556/1‑150 (MQ=255) aTCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTGTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAAc < 2:1922470/150‑1 (MQ=255) tCTTTATTCACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGAAAACT‑GCTTTTGTAGTGTGGGTTACCGATAACAATCAGTTTGCCCCCCCCGACTTGCCCCCGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACg < 1:4682669/150‑1 (MQ=255) tttATTACCGCCCCCGTTCCAGCGGTACCGGTTCGGGAAAC‑CAAAATGGCTGTTGTTGTGTGGGTTACCTATAACCAACTGTTGGCCCACACCGACTTGCCCCAGCTAAATACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGtt < 1:2069848/150‑1 (MQ=255) ttaACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGAAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTcc < 2:4614168/150‑1 (MQ=255) aaCGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCgg < 2:3446439/150‑1 (MQ=255) cGCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCt > 2:4014695/1‑150 (MQ=255) gCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAAT‑GCTGTTGTTGTGTGGGTTACCTATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTc < 1:1170656/150‑1 (MQ=255) gCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTc < 2:2719288/150‑1 (MQ=255) gCCCCCGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTc > 2:284896/1‑150 (MQ=255) cccccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTca > 2:1852676/1‑150 (MQ=255) cccccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTca > 1:3617102/1‑150 (MQ=255) ccccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTcaa > 1:1906960/1‑150 (MQ=255) ccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTcaaca < 2:2659984/150‑1 (MQ=255) ccGTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTcaaca > 1:270717/1‑150 (MQ=255) gTTCCAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAag > 2:4318553/1‑150 (MQ=255) gTTCCAGCTGTAACCGTTCGGGAAAAGAAAATT‑GCTGTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAag < 1:2763643/150‑1 (MQ=255) ccAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAgaga > 1:710782/1‑150 (MQ=255) ctggtGTACCCGTTGGGGAAAAGAAAATT‑GGTTTTGTTGTGTGGTTTACCGATAACAATCTTTTTGCCCTCACCGAGTTGCCCCTGCGAAATACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa < 1:2454335/146‑1 (MQ=255) ctggtGTAACGGTTGGGGAAAAGCAAATT‑GGTGTTGTTGTGTGGGTTACGGATAACCATCTGTTTGCCCTCACGGAGTTGCCCCTGCTAAATACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa < 1:2601053/146‑1 (MQ=255) cAGCTGTAACCGTTCGGGCAAAGCAAATT‑GCTGTTGTTGTGTGGGTTACCGATAACCATCTGTTTGCCCTCACCGACTTGCCCCTGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa < 1:3958441/150‑1 (MQ=255) cAGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa > 1:1401033/1‑150 (MQ=255) cAGCTGTAACCGTGCGGGCAAAGCAAATT‑GCTGTTGTAGTGTGGGTTACCTATAACCATCAGTGTGCCCTCACCGACTTGCCCCCGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGaa < 2:1185476/150‑1 (MQ=255) aGCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAg > 2:2752208/1‑150 (MQ=255) gCTGTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAgg > 2:1337700/1‑150 (MQ=255) tGTAACCGTTGGGGAAACGCAAAAT‑GCTGTTGTTGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATACACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGgcg < 1:145382/150‑1 (MQ=255) tGTAACCGTTCGGGCAACGCAAAAT‑GCTTTTGTAGTGTGGGTTACCGATAACCATCTGTTTGCCCTCACCGATTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGgcg < 1:3990289/150‑1 (MQ=255) gTAACCGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGgcgc > 1:1253683/1‑150 (MQ=255) ccGTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTcc > 1:2203535/1‑150 (MQ=255) cGTTCGGGCAACGCAAAAT‑GCTGTTGTAGGGTGGGTTACCGATAACCATCGGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCg < 2:2449500/150‑1 (MQ=255) gTTCGGGCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGt < 2:4779670/150‑1 (MQ=255) ttCGGGAAACGAAAAAT‑GCTGTTGTAGTGTGGTTTACCTATAACAAACTTTTGGCCCTCCCCGACTTGCCCCAGCTAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTa < 1:1003058/150‑1 (MQ=255) gggCAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATg > 2:1472580/1‑150 (MQ=255) cAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTAc > 2:4607562/1‑150 (MQ=255) cAAAGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTAc > 2:2907607/1‑150 (MQ=255) aaCGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACg > 1:978849/1‑150 (MQ=255) | CTGGCTTTCGCGTCCGGCTTCCATTTATCGTCGGACAGATAGCGCAGCACGTTCTCCATGAAGTTCTTCATGTCATCCGGGTCGCTGTTGAGCGTACACTGCCCATCTTTATTAACGCCCCCGTTCCAGCTGTAACCGTTCGGGCAACGCAAAAT‑GCTGTTGTAGTGTGGGTTACCGATAACCATCAGTTTGCCCTCACCGACTTGCCCCAGCGAAATAAACGGCAGGTTAAAGGTGGCGGTATCGCGCGTAACGTTTTCCGGCTCAACAAGAGAAGGCGCTTCCGTAATGTACG > CP009273/3110604‑3110898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |