| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,312,862 | T→A | 32.0% | R289R (CGT→CGA) | argG → | argininosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,312,862 | 0 | T | A | 32.0% | 494.3 / inf | 334 | R289R (CGT→CGA) | argG | argininosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (118/109); new base A (69/38); total (187/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
Only 100 of 336 total aligned reads displayed.
GCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTC > CP009273/3312714‑3313011 | cTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTgg > 2:1518272/1‑150 (MQ=255) tttGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGt > 1:3108492/1‑150 (MQ=255) tttGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAAACGTATCATCGAAGCGAAAAGCCGTGGt > 1:4680951/1‑150 (MQ=255) ttGAACAAGGTCATCCGGTGGCGCTGACCGGTAAACCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTa < 1:2798210/150‑1 (MQ=255) aCAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTa < 2:2301602/150‑1 (MQ=255) aCAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTa > 2:3761538/1‑150 (MQ=255) aCAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTa > 1:4610919/1‑150 (MQ=255) aaGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACg < 2:2427767/150‑1 (MQ=255) aaGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACg < 2:1333540/150‑1 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTcc < 2:561146/150‑1 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTcc > 2:322021/1‑150 (MQ=255) ccGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCg < 1:2377740/150‑1 (MQ=255) cGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCgg > 1:2835180/1‑150 (MQ=255) ggTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCggg > 2:1408447/1‑150 (MQ=255) ggTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCggg < 2:1305845/150‑1 (MQ=255) ggTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCggg > 1:336703/1‑150 (MQ=255) ggTGGCGCTGAACGGAAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCggg < 1:1630128/150‑1 (MQ=255) tGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGa > 2:1934496/1‑150 (MQ=255) gcgcTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATg < 2:2362410/150‑1 (MQ=255) gcTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGc > 2:1200331/1‑150 (MQ=255) cTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCa < 2:2232591/150‑1 (MQ=255) gAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCAct > 1:3930760/1‑150 (MQ=255) gAACGGAAAAACCTTGAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCAct < 1:840590/150‑1 (MQ=255) cGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCActgct < 2:252769/150‑1 (MQ=255) ggTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCActgctg < 1:3185626/150‑1 (MQ=255) gTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACtgctgc > 2:100920/1‑150 (MQ=255) tAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGca > 2:1634679/1‑150 (MQ=255) aaaaCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGcac > 1:604697/1‑150 (MQ=255) aaaCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGcaca > 2:2207943/1‑150 (MQ=255) aaCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACAt < 1:3546871/150‑1 (MQ=255) ccTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTg < 1:4220677/150‑1 (MQ=255) catttAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTg < 2:4048093/148‑1 (MQ=255) ttAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGt < 1:2925953/150‑1 (MQ=255) cgacgaCGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGa > 2:4201507/1‑150 (MQ=255) gacgacGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCATGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGaa > 2:2870291/1‑150 (MQ=255) acgacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAAc > 1:4050746/1‑150 (MQ=255) cgacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACg > 1:133756/1‑150 (MQ=255) gTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTg < 2:1060302/150‑1 (MQ=255) gTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTg < 2:1095778/150‑1 (MQ=255) aGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGtt < 1:1172587/150‑1 (MQ=255) aaTGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGAc < 2:3036468/150‑1 (MQ=255) atgatgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGAcc > 1:2871577/1‑150 (MQ=255) gatgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCgg > 2:3567167/1‑150 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt > 1:1269409/1‑150 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt > 1:3718603/1‑150 (MQ=255) ggAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTca > 1:2143296/1‑150 (MQ=255) aaGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTcact < 2:353677/150‑2 (MQ=255) aGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACaa > 1:4602732/1‑150 (MQ=255) tAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGa > 2:2126748/1‑150 (MQ=255) tAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGa > 2:4680193/1‑150 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg > 2:2916433/1‑150 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg < 1:310463/150‑1 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg > 2:3874894/1‑150 (MQ=255) aCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAg > 2:4549036/1‑150 (MQ=255) ccGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGa > 2:4506619/1‑150 (MQ=255) ccGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGa > 2:2159483/1‑150 (MQ=255) gCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGaca > 1:4141197/1‑150 (MQ=255) cATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGacac > 1:4497284/1‑150 (MQ=255) gcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTg < 1:1093566/150‑1 (MQ=255) cggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGa < 1:1875582/150‑1 (MQ=255) ggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAg < 2:691383/150‑1 (MQ=255) ggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAg > 2:1176420/1‑150 (MQ=255) ggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAg > 1:2988565/1‑150 (MQ=255) ggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAg < 1:3446118/150‑1 (MQ=255) gtcgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGc < 2:4376395/150‑1 (MQ=255) tcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTa < 1:2506259/150‑1 (MQ=255) cACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTAt > 1:43931/1‑150 (MQ=255) cGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCa > 2:2782275/1‑150 (MQ=255) gCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCAcg < 1:1511994/150‑1 (MQ=255) tGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACgcgc > 2:657709/1‑150 (MQ=255) gCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATg < 2:3942150/150‑1 (MQ=255) cATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATgg > 1:240083/1‑150 (MQ=255) aTGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgt < 2:1540261/150‑1 (MQ=255) aTGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgt < 2:336703/150‑1 (MQ=255) gAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcg < 1:3781178/150‑1 (MQ=255) gAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcg > 2:2016550/1‑150 (MQ=255) gAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcg > 1:1753102/1‑150 (MQ=255) aGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcgt > 2:4121691/1‑150 (MQ=255) aCCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGt > 1:3304544/1‑150 (MQ=255) aGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTgg < 2:1156486/150‑1 (MQ=255) aTTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGc > 1:429680/1‑150 (MQ=255) aTTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGc > 1:2277453/1‑150 (MQ=255) ttGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGcc > 2:2602074/1‑150 (MQ=255) ttGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGcc < 2:514644/150‑1 (MQ=255) aaaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTc > 1:4321060/1‑150 (MQ=255) aaaaCCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTc > 2:1777547/1‑150 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct > 1:3841744/1‑150 (MQ=255) aaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctg < 1:913156/150‑1 (MQ=255) gTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGt < 2:4272267/150‑1 (MQ=255) tATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTa > 1:3237058/1‑150 (MQ=255) tATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTa < 1:3062906/150‑1 (MQ=255) atcatcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTAc > 1:1036658/1‑150 (MQ=255) gAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg > 2:4781659/1‑150 (MQ=255) gAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg < 2:1268083/150‑1 (MQ=255) gAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg > 2:777622/1‑150 (MQ=255) gAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg > 2:443975/1‑150 (MQ=255) aaaGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGt < 2:3474312/150‑1 (MQ=255) gCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTg < 1:1408447/150‑1 (MQ=255) gCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTg > 2:929720/1‑150 (MQ=255) cGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGAc > 2:2513806/1‑150 (MQ=255) | GCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTC > CP009273/3312714‑3313011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |