| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,386,672 | C→A | 28.8% | P982P (CCG→CCT) | yhdP ← | DUF3971‑AsmA2 domains protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,386,672 | 0 | C | A | 28.8% | 620.4 / 236.6 | 298 | P982P (CCG→CCT) | yhdP | DUF3971‑AsmA2 domains protein |
| Reads supporting (aligned to +/- strand): ref base C (98/114); new base A (52/34); total (150/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.99e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 302 total aligned reads displayed.
TATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGCC > CP009273/3386524‑3386821 | tATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCACTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCg < 1:664278/150‑1 (MQ=255) atcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGaaa < 2:2230406/150‑1 (MQ=255) tcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAg < 2:2020193/150‑1 (MQ=255) tCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGtga < 1:3978443/150‑1 (MQ=255) tGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACg > 1:4144760/1‑150 (MQ=255) tGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACg > 2:2592546/1‑150 (MQ=255) gTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGc > 2:467094/1‑150 (MQ=255) tCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCg < 1:4049276/150‑1 (MQ=255) aGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGtt < 2:2946577/150‑1 (MQ=255) cGTTAACGTATCGCGAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGACCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCTGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGa < 2:4203943/150‑1 (MQ=255) cGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGa < 2:3889502/150‑1 (MQ=255) cGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGa < 1:4489474/150‑1 (MQ=255) gTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGaa < 2:1222473/150‑1 (MQ=255) tAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATc > 2:2316054/1‑150 (MQ=255) tAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATc > 1:963931/1‑150 (MQ=255) tATCGCCAGAAATGGAGATATCACTGACAATGCGAACTAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCTGACAGCCACGGAAGTTAATGCGCTCCGTTGTCGGTAAAGGTGATGACGGCGTTGAATcacaac > 2:3369704/1‑150 (MQ=255) aTCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACg > 2:572339/1‑150 (MQ=255) tCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGa > 1:513439/1‑150 (MQ=255) cGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAg < 1:134565/150‑1 (MQ=255) cGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAg < 1:2584650/150‑1 (MQ=255) ccAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGtt > 2:2460352/1‑150 (MQ=255) ccAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGtt > 2:517680/1‑150 (MQ=255) cAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGttt > 1:2035762/1‑150 (MQ=255) cAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGttt > 1:4441345/1‑150 (MQ=255) aGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGtttt > 1:2094596/1‑150 (MQ=255) aaaTGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCg < 2:1519125/150‑1 (MQ=255) aaTGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTGGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGc > 2:494316/1‑150 (MQ=255) aTGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGcc > 1:1614255/1‑150 (MQ=255) tGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCa < 2:1655291/150‑1 (MQ=255) ggTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCAc > 2:1319623/1‑150 (MQ=255) tGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGc > 1:1179520/1‑150 (MQ=255) gATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCt > 2:3956662/1‑150 (MQ=255) tatCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCg < 2:1188410/150‑1 (MQ=255) atCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCgg > 1:4002602/1‑150 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt < 2:3255980/150‑1 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt > 1:1521462/1‑150 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt < 1:1888018/150‑1 (MQ=255) tGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTga < 2:1167512/150‑2 (MQ=255) gTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGta < 1:3493942/150‑1 (MQ=255) gTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGta < 1:4748706/150‑1 (MQ=255) cAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaat > 1:909229/1‑150 (MQ=255) aaTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaata < 2:3804596/150‑1 (MQ=255) aaTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaata < 1:3591842/150‑1 (MQ=255) aTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaataa > 2:4386936/1‑150 (MQ=255) cGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGa < 2:1813012/150‑1 (MQ=255) gACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGat > 2:2527562/1‑150 (MQ=255) gACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGat > 2:3047221/1‑150 (MQ=255) aCCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGata < 1:3692721/150‑1 (MQ=255) ccGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGatat > 2:3732019/1‑150 (MQ=255) ccGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGatat < 2:4746808/150‑1 (MQ=255) cGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATAtt > 2:2778567/1‑150 (MQ=255) cGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATAtt > 2:4178896/1‑150 (MQ=255) gAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATAttt < 1:2084067/150‑1 (MQ=255) ttttGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGata < 1:1134962/150‑1 (MQ=255) ttttGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGata < 1:1941453/150‑1 (MQ=255) tttGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGACAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGatat > 2:3914515/1‑150 (MQ=255) tGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTc > 1:3084588/1‑150 (MQ=255) gCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCg < 2:1771652/150‑1 (MQ=255) aGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAGTGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcc > 2:2742012/1‑150 (MQ=255) aGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcc > 2:1139182/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGACGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 1:4503753/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 2:1612903/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca < 1:2100361/150‑1 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 2:1061176/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 2:4017550/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 1:2519401/1‑150 (MQ=255) aaCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCAc < 2:4507877/150‑1 (MQ=255) aaCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCAc < 1:2875870/150‑1 (MQ=255) aaCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCAc < 1:2660448/150‑1 (MQ=255) ccAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACgg > 1:1451675/1‑150 (MQ=255) gCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGgcgc > 1:3253603/1‑150 (MQ=255) gtgCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGttatta > 2:4264714/1‑150 (MQ=255) cGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATc < 1:1332900/150‑1 (MQ=255) tttGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTTATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTa < 2:692825/150‑1 (MQ=255) tttGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTa < 1:1998056/150‑1 (MQ=255) tttGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTa < 1:2204536/150‑1 (MQ=255) ggCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGt > 1:3817170/1‑150 (MQ=255) cGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTgg < 2:2191318/150‑1 (MQ=255) gTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGc > 2:4272041/1‑150 (MQ=255) cGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGtt > 1:2507889/1‑150 (MQ=255) ggCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTg > 1:1009365/1‑150 (MQ=255) ccagccaCGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGAt < 1:2278703/150‑1 (MQ=255) cagccaCGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGAtt < 1:467094/150‑1 (MQ=255) cGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGc > 2:3643961/1‑150 (MQ=255) ggAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGcc < 2:1417397/150‑1 (MQ=255) aaGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCt < 1:3956662/150‑1 (MQ=255) aaGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCt < 2:1704007/150‑1 (MQ=255) aaGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCt > 1:3465136/1‑150 (MQ=255) aaGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCt > 1:586218/1‑150 (MQ=255) aGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCtt < 1:1722765/150‑1 (MQ=255) aTGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCt < 1:3335002/150‑1 (MQ=255) tGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCtt < 1:2804313/150‑1 (MQ=255) cgcTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCa < 1:2985517/150‑1 (MQ=255) cgcTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCa < 1:1069281/150‑1 (MQ=255) gcTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCaa < 1:4178896/150‑1 (MQ=255) cTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAAc < 1:2284068/150‑1 (MQ=255) tGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGt < 1:785307/150‑1 (MQ=255) gTCGGGAAAGGTGATGACTGCGTTGTATCTTCTCGTGTTTTCGACACTCTCTGGTTGTATTATAGATTTTTGATATTAGCCAGACACGGCGCGTTATTAGGCATAGATAGCGTGGCGTTGATTTCACGACCTTGCGCGTCAACCAGGGTg < 2:1455935/150‑1 (MQ=255) cGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGcc > 1:255850/1‑150 (MQ=255) cGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGcc < 1:2460352/150‑1 (MQ=255) | TATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGCC > CP009273/3386524‑3386821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |