| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,439,443 | G→T | 8.1% | I19I (ATC→ATA) | rplF ← | 50S ribosomal subunit protein L6 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,439,443 | 0 | G | T | 8.1% | 668.5 / 4.4 | 247 | I19I (ATC→ATA) | rplF | 50S ribosomal subunit protein L6 |
| Reads supporting (aligned to +/- strand): ref base G (122/90); new base T (8/27); total (130/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.85e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 259 total aligned reads displayed.
CGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTA > CP009273/3439294‑3439590 | cgcgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTg < 1:3042248/150‑1 (MQ=255)cgcgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTg < 2:3521556/150‑1 (MQ=255)cgcgcgGGACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTg < 1:3211254/150‑1 (MQ=255) gcgcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGa < 1:2151476/150‑1 (MQ=255) gcgGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGAtt < 1:4652418/150‑1 (MQ=255) ggTACCAGCCTGTGCCCAACCGTCTGCATAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTTACTTTGTTCGTAATAAACTGACCGTTGTtttt > 1:531470/1‑150 (MQ=255) gTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGAttttt < 1:4126412/150‑1 (MQ=255) gTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGAttttt < 1:1721568/150‑1 (MQ=255) tACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATAGTAATAACCAGAACGTTGATTTTTa > 2:3331999/1‑150 (MQ=255) aCCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCATTGTTCGTAATAACCAGACCCTTGATTTTTaa > 2:2351/1‑149 (MQ=255) cAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGt < 1:2642699/150‑1 (MQ=255) aGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATAGTAATAACCTGACCGTTGATTTTTACGTc > 2:279562/1‑150 (MQ=255) ccTGTGCCCAACCGTCTGCGTAACCATCCCGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCaa < 2:1544118/150‑1 (MQ=255) tgtgCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACg < 1:1109215/150‑1 (MQ=255) tgCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGcc < 1:2246970/150‑1 (MQ=255) gCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCg < 2:938127/150‑1 (MQ=255) cAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCa < 2:1144769/150‑1 (MQ=255) aaCCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCCTTGATTTTTAAGTCAACGCCGGCAg > 1:4311986/1‑150 (MQ=255) aaCCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCTTTGTTCGTAATAAACTGAACGTTGATTTTTTAGTCAACGCCGGCAg > 1:1253735/1‑150 (MQ=255) cGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaa < 1:2106303/150‑1 (MQ=255) cGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaa < 2:4407723/150‑1 (MQ=255) gTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaac < 2:2509499/150‑1 (MQ=255) tCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaaca < 2:1268088/150‑1 (MQ=255) tGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGaacaac > 2:4523988/1‑150 (MQ=255) tAACCATCACGCGGACCGATGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGAcc < 2:4720222/150‑1 (MQ=255) aaCCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTGGATTTTTACGTCAACGCCGGCAGGAACAACGACCg > 2:4512821/1‑150 (MQ=255) aaCCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAAACTGACCGTTGATTTTTTAGTCAAAGCCGGCAGGAACAACGACCg > 2:1397014/1‑150 (MQ=255) aTCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTTCCTTTTATAGTAAAAAACAGACCCTTGTTTTTTTAGTCAACGCCGGCAGGAACAACCACCCGTGc > 1:2070152/1‑150 (MQ=255) cccgctGACCGAAGGTAAGGGTATTATCTGAATGTTTAACTTAAACAGAATCGTTGAGATTACGATACAGCTCGCCGTTTTTACCTTTGATCTTAATACCCTGACGGTTTATTTTTACGTCAACGCCGGCTGGAACAACGACCGGTGCtt < 2:1666976/148‑1 (MQ=255) cACGGGGACCGAAGTTCTGGTTTTTATCTGAATTTTTAACTTCAACAGCATCTTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCtt < 2:2025793/150‑1 (MQ=255) cgcgGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTGGATCGTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAACTACCGGTGCtttt < 2:3183366/150‑2 (MQ=255) cgGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTAAGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGc > 1:3096014/1‑150 (MQ=255) gACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCaa > 2:3858924/1‑150 (MQ=255) aCCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAac > 2:1725423/1‑150 (MQ=255) ccGAAGGTCTGGTTATTATCTGCATGTTTACCTTCAACAGCATCGTTGAGAGTACGAGTCCGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAaca < 2:927603/150‑1 (MQ=255) cGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTCCTTTGATAGTAATAACCTGACCGGTGATTTTTAAGTGAACGCCGGCAGGGACAACGAACGGTGCTTTTTCAacac > 1:163421/1‑150 (MQ=255) ggTCAGGGTTTTATCTGAATGTTTAACTTCAACAGCATCGTTGAGAGTACGTGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTCACCGTTGATTTTTACGACAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACgaga < 2:600721/150‑1 (MQ=255) ggTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACgaga < 2:2683352/150‑1 (MQ=255) gTCAGGGTATTATCGGATTTTTTAACTTCAACAGCATCGTTGAGTGTACGAGTCCGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACGGTTTATTTTTCCGTCAACGCGGGCCGGAACAACGACCGGTGCTTTAGCAACACGAGAc < 2:3624292/150‑1 (MQ=255) tCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTTACTTTTATCGTAATAAACAGACCCTTTTTTTTTTAGTAAAAGCCCGCAGGAACAACCCCCCGTGCTTTATCAACACCAGACa > 1:156777/1‑150 (MQ=255) aGGTTATTATCTGCATTTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAtt < 2:2230819/150‑1 (MQ=255) aGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCCGCTCGCCGTTTTTACCTTTGATCTTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAtt < 2:4239101/150‑1 (MQ=255) aGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAtt < 2:4631651/150‑1 (MQ=255) gtttattatCTGCATTTTTAAATTAAACAGCATCTTTTAGAGTACGAGTCAGCTCGCCTTTTTTACCTTTTATCGAAATAACCTGACCGTTGTTTTTTACGTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACAttt < 2:859609/147‑1 (MQ=255) ggtttttatCTGCTTTTTTAACTTCACCAGCATCGTTGAGTTTACGAGTCAGCTCGCGTTTTTTACCTTTGATCTTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAttt < 2:2816650/145‑1 (MQ=255) gTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAttttt < 2:3108990/150‑1 (MQ=255) tattatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATCGTAATAACCTGACCGTTGATTTTTAAGTCAACGCCCGCAGGAACAACCACCGGTGCTTTAGCAAAACGAGACAtttttt > 1:3777356/1‑150 (MQ=255) tatCTGCATTTTTAACTTCAACAGCATCTTTTAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCCGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtcct < 1:1944605/150‑1 (MQ=255) tatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtccg > 2:2117367/1‑149 (MQ=255) tatCTCAATGTTTAACTACAACAGCATCTTTGAGATTACGAGTCAGCTCGCCTTTTTTACCTTTGATCGTAATAACCTGACCTTTGATTTTAACGTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtcct < 1:4347481/150‑1 (MQ=255) atCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTtcctc < 2:2715350/150‑1 (MQ=255) atCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAATTTTtactc > 1:741639/1‑150 (MQ=255) tCTGAATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACCACGACCGGTGCTTTAGCAACACGAGACATTTTTtcctcc < 2:960520/150‑1 (MQ=255) cTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCTTTTATCGTAATAACCTGACCGTTTATTTTTAAGTCAACGCCCGCAGGAACAACGACCGGTGCTTTATCAAAACGAGACAATTTTTACTACg > 1:2215979/1‑150 (MQ=255) cTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTGTTTACCTTTTATAGTAATAAACTGACCGTTGATTTTTAAGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTTGCAACACGAGACATTTTTTACTACg > 1:637003/1‑150 (MQ=255) cATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCGGTTTTTACATTTGATCTTAATAACCTGACGTTTGATTTTAACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGAtt < 1:1080523/150‑1 (MQ=255) aTGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCACCACGAGACATTTTTTCCTCCGATTa > 2:4358845/1‑150 (MQ=255) tttttAAATTCAACAGCATCTTTTAGTGTACGAGTCAGCTCGCTGTTTTTACCTTTGATCTTAATAACCTGACGGTTTTTTTTAACGAAACCGCGGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAg < 1:1292850/148‑1 (MQ=255) tAACTTCAACAGCATCGTTGAGAGTACGAGTCTGCTCGCCGTTTTTACCTTTGATCGTAATAACCGGACCGTTGATTTTTACGTCAACGCCGGCTGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTa < 1:1538824/150‑1 (MQ=255) aaCTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATCGTAATAACCGGACCGTTGATTTTTACGTCAACGCCCGCCGGAACAACGACCCGGGCGTTAGCAACACGCGACAATTTTTACGCCGCTTAGGCTAc > 1:3024937/1‑150 (MQ=255) ctacAACAGAATCGTTGAGTTTACGTGACAGCGCGCCTTTTTTACCTTTTATCTTAATAACCTGACCTTTTATTTTTACTTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGt < 1:141299/147‑1 (MQ=255) cTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATAGTAATAAACTGACCGTTGATTTTTACGTCAACGCCCGCAGGAACAACGACCCGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTATGCTACGt > 1:2328149/1‑150 (MQ=255) ttCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAAACTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTACGATTAGGCTACGTa > 2:4698709/1‑150 (MQ=255) aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCa > 2:3450622/1‑150 (MQ=255) cAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTTATAGTAAAAACCAGACCCGTGATTTTTACGTCAAAGCCGGCAGGAACAACGACCCGTGCTTTATCAACACCAGACAATTTTTACTCCCAGTAGGCTACGTATCAGa > 2:4431059/1‑150 (MQ=255) cATCGTTGAGATTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACGTTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATaa < 2:3884073/150‑1 (MQ=255) ttGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGAAATTTTTTACTCCGATTAGGCTACGTAGCAGATAATTTCg > 2:1634738/1‑150 (MQ=255) tGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGc > 2:2619274/1‑150 (MQ=255) cGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCAGGCCGTTGATTTTTTCGTCAACCCCGGCAGGAACAACCACCGGTGCGTTAGCAACCCCAGACCTTTTTTCCTCCGCTTAGGCGACGGAGCAGAAAAATTCGCCACCAAGa > 2:1782135/1‑150 (MQ=255) gAGTCAGCTCGCCTTTTTTACCTTTTATCGTAATAACCTGACCGTTTATTTTTCCGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGAc < 1:1892393/150‑1 (MQ=255) aGCTCGCCGTTTTTACCTTTGAACCTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAAAAACGACCGGTGCTTTAGCAACACGAGACAATTTTTACTCCGATTAGGCTACGTAGCAGATAATTTAGCCAACAAGACCAGcc > 2:1049524/1‑150 (MQ=255) gCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCt > 2:1567074/1‑150 (MQ=255) tCGCCTTTTTTACCTTTGATCGTAATAACCTGACCGTTTATTTTTACTACAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTgg < 1:3843993/150‑1 (MQ=255) tCGCCGTTTTTACCTTTTATCGTAATAACCTGACCGTTGATTTTTAAGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACAATTTTTCCTCCGATTAGGCTAAGTAGCAGATAATTTAGCCACCAAGACCAGCCTgg > 1:1339319/1‑150 (MQ=255) tCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTgg > 2:702434/1‑150 (MQ=255) tCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTAAGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTgg > 1:3927720/1‑150 (MQ=255) gTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcgcgc > 1:1252832/1‑150 (MQ=255) tttttACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCt > 2:2806147/1‑150 (MQ=255) tttttACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCt > 2:2443/1‑150 (MQ=255) tttttACCTTGGATCGTAATACCCTGCCCGTTGATTTGTCCGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCt < 2:769972/150‑1 (MQ=255) ccTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGa > 2:1879332/1‑150 (MQ=255) ccTTTGAGCGTCATACCCGGCCCGTTGATTCTGCCGTCACCGCCGGCAGGCACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAAGTTCGCCACCAAGCCCAGCCTGGCGCGCTGCACGa < 2:3287070/150‑1 (MQ=255) cTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGAt > 2:3718820/1‑150 (MQ=255) cTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGAt > 2:1017999/1‑150 (MQ=255) ttGATCGTAATACCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCa < 2:3049043/150‑1 (MQ=255) ttGATCGTAATAACCTGACCTTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCa < 1:2563035/150‑1 (MQ=255) ttGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCa < 2:661563/150‑1 (MQ=255) tgttCGTAATAACCTGCCCTTTGTTTTTTACGTCAACGCCGGCAGTAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAg < 1:2495957/147‑1 (MQ=255) tCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTGAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCa < 2:3691081/150‑1 (MQ=255) taataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 1:1962452/1‑150 (MQ=255) aataaCCGCACGTTTTATTTTCACTTCAACGCGGGCAGGAACCACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAac < 1:844781/150‑1 (MQ=255) caCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACAcc > 2:4291229/2‑150 (MQ=255) aCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCt < 2:1487713/150‑1 (MQ=255) tGACCTTTTATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCTCGATCAGTCATAACACCTTTa < 2:2852669/150‑1 (MQ=255) tGACCTTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTa < 1:345681/150‑1 (MQ=255) tGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTa > 1:4446065/1‑150 (MQ=255) tGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTa > 1:2042032/1‑150 (MQ=255) tGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTa < 2:333921/150‑1 (MQ=255) gACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTag < 2:3024937/150‑1 (MQ=255) gTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGt > 2:25473/1‑150 (MQ=255) | CGCGCGGTACCAGCCTGTGCCCAACCGTCTGCGTAACCATCACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTA > CP009273/3439294‑3439590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |