| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,483,095 | C→A | 28.9% | V149F (GTT→TTT) | argD ← | bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,483,095 | 0 | C | A | 28.9% | 687.9 / 225.9 | 353 | V149F (GTT→TTT) | argD | bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (116/130); new base A (41/61); total (157/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 357 total aligned reads displayed.
CTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTCGG > CP009273/3482946‑3483244 | ctcgccctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAc > 1:2410469/1‑150 (MQ=255) gccctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGt < 1:559272/150‑1 (MQ=255) ccctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTa > 1:171667/1‑150 (MQ=255) cctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTaa > 1:3257894/1‑150 (MQ=255) cctGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTaa > 2:1462370/1‑150 (MQ=255) tGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAAc > 1:807840/1‑150 (MQ=255) ggATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACa < 2:3438716/150‑1 (MQ=255) cGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACagcga < 2:450397/150‑1 (MQ=255) ggCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACagcgag < 2:4593460/150‑1 (MQ=255) gCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACagcgagc > 1:4371994/1‑150 (MQ=255) accaccaccGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCa < 2:2017191/150‑1 (MQ=255) ccaccGCACAGGTGTGATCATCCAGCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGTCCCAAAGCCGTCGGAATATTTTGGCTGACCACCCACCTAAACGGTAAACAGCGAGCGACCAAGaa > 2:920991/1‑150 (MQ=255) cGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGc < 1:3091147/150‑1 (MQ=255) gcccaGGTGGGATCACCCCTCACCGCTTTCAGGGCTTGGAGATCGTTAACGGGAAGGTGGATGATGTCGGCCGGGTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCCCCCACCGAACCGGTAAACAGCGAGCGACCATGAAAAGCg < 2:16680/147‑1 (MQ=255) gCACTGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAATGGTAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCg < 1:3932938/150‑1 (MQ=255) cacaGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCAAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGTTAAACAGCGAGCGACCATGAAAAGCGt < 1:1078681/150‑1 (MQ=255) caGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTa < 2:1377936/150‑1 (MQ=255) caGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTa < 2:611069/150‑1 (MQ=255) tgATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAg < 2:1472454/150‑1 (MQ=255) tgATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAg < 2:1633229/150‑1 (MQ=255) gttcatcCATCTCCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAgg < 2:1506814/148‑1 (MQ=255) gATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAgg > 1:131128/1‑150 (MQ=255) tcatcaATCACCGATTTCACTGCATGGAGATCGTTAAAGGTAACGTGGATGATGTCTGCCGGTTTCGGCCAAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCa < 1:4540036/150‑1 (MQ=255) tcatcCATCACCGCTTTCACTGCATGGATATCGTTAATGGTAACGTGGATGTTGTCTGCCGTTTTCGGCCCAAAGCCGTCGTAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCa < 1:4540000/150‑1 (MQ=255) tcatcCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGTTGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGTTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCa < 1:2138668/150‑1 (MQ=255) catccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCTAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaa < 1:1025015/150‑1 (MQ=255) catccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaa < 2:1239272/150‑1 (MQ=255) catcaatcACCGATTTCACTGCATGGAGATCGTTAAAGGGAACGTGTATGTTGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTGGGCTGCCCACCCACCTAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaa < 1:3468914/150‑1 (MQ=255) aatccatcACCGCTTTCACTGCTTGGAGATCTTTAAAGGGAACGGGTATGTTGTCTGCCGGTTTCGGCCCAAAGCCGTCGTAATTTTTTGGCTGCCCACCCCCCGAAACGTTAAACTGCGAGCGACCATGAAAAGCGTTATGGAAGGCaa < 1:2821042/149‑1 (MQ=255) atccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTCAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCcat > 2:2500104/1‑150 (MQ=255) atccatcACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCaat > 2:106206/1‑150 (MQ=255) cACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAAtttt < 2:3549342/150‑1 (MQ=255) aCCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTg < 2:4750053/150‑1 (MQ=255) cGCTTTCACTGCATGGATATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAACGCCGTCGGAATATTTTGGCTGCCCACCCACAGAAAAGTTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGt < 1:2698804/150‑1 (MQ=255) cGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGt < 2:4631538/150‑1 (MQ=255) gCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtt < 1:3167684/150‑1 (MQ=255) tttCACTGCATGGTGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACTGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtttt < 2:1563319/150‑1 (MQ=255) tttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCTAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtttt < 1:2602538/150‑1 (MQ=255) tttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtttt < 2:4337844/150‑1 (MQ=255) tttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtttt > 2:3257290/1‑150 (MQ=255) tttCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGtttt < 1:3772850/150‑1 (MQ=255) tCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGa < 1:790478/150‑1 (MQ=255) tCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGa > 2:2559895/1‑150 (MQ=255) cACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaa > 2:2659810/1‑150 (MQ=255) cACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGaa > 2:2881151/1‑150 (MQ=255) cATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGc > 2:1876996/1‑150 (MQ=255) agaTCGTTAACGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTGGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGa < 1:3131631/150‑1 (MQ=255) gaTCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGAc > 2:3691351/1‑150 (MQ=255) gTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTCTGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac > 1:3659636/1‑150 (MQ=255) gTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcac < 2:801351/150‑1 (MQ=255) aaaGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcacaca > 2:2443798/1‑150 (MQ=255) aaaGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGcacaca > 2:1266807/1‑150 (MQ=255) gggAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGc < 2:180446/150‑1 (MQ=255) gAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGt > 1:1342261/1‑150 (MQ=255) aCGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGTAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTaa < 1:855744/150‑1 (MQ=255) cGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAAt > 2:3898617/1‑150 (MQ=255) gTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATg > 1:442557/1‑150 (MQ=255) gTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATg < 2:4442288/150‑1 (MQ=255) atgatgTCTGCCGGTTTCGGCCCAACGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGt < 2:3051089/150‑1 (MQ=255) tgatgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTg > 1:1002765/1‑150 (MQ=255) gatgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGc < 1:4746754/150‑1 (MQ=255) atgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGcc > 2:3664377/1‑150 (MQ=255) atgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGcc > 1:4164597/1‑150 (MQ=255) tgTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCa > 1:1548765/1‑150 (MQ=255) tCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGt > 2:2750012/1‑150 (MQ=255) tCTGCCGGTTTCGGCCCAAAGCCGTCGGAAAATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGt > 2:358980/1‑150 (MQ=255) gCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTa > 1:3806064/1‑150 (MQ=255) ccGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTaa > 1:636416/1‑150 (MQ=255) cGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAACCGTTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTaaa < 1:2041883/150‑1 (MQ=255) gTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAgg < 1:2927208/150‑1 (MQ=255) ttCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCg > 2:2082515/1‑150 (MQ=255) tCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCgg > 1:3387341/1‑150 (MQ=255) cAAAGCCTTCGGAATATTTTGGCTGCCCCCCCCCCGAACAGTTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATACTTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGt < 1:1466118/150‑1 (MQ=255) cAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGt > 1:470265/1‑150 (MQ=255) cAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGt > 1:2186274/1‑150 (MQ=255) cAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGt < 1:1409440/150‑1 (MQ=255) cacgcggTCTGATTATTGTGGGTGCCCCCCCACCGAAACGTTAAACAGCTAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGtt < 1:405335/144‑1 (MQ=255) aaaGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGtt < 2:2138981/150‑1 (MQ=255) aaaGCCGTCGGAATATTTGGGCTGCCCACCCACCGAACCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGtt < 2:1596784/150‑1 (MQ=255) aaGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGGTATGGAAGGCAATATTTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTa > 1:1830943/1‑150 (MQ=255) aGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAg > 2:42074/1‑150 (MQ=255) gTCGGAATATTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTc > 1:925429/1‑150 (MQ=255) tCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTcc > 2:572560/1‑150 (MQ=255) ggAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGt > 2:3172379/1‑150 (MQ=255) aaTATTTTGGCTGCCCACCCACCGAAAATGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGc < 1:4792161/150‑1 (MQ=255) atatTTTGGCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGcc < 1:1116733/150‑1 (MQ=255) gtGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGt < 2:495203/149‑1 (MQ=255) gCTGCCCACCCACCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTTTGGAAGGCTATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTTATGGCGTGCCAGTTTTTAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCa < 1:2394500/150‑1 (MQ=255) tGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATa > 1:1753782/1‑150 (MQ=255) ccacccacCGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAac > 2:83663/1‑150 (MQ=255) cacccaccGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAaca < 1:19334/150‑1 (MQ=255) acccaccGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAacac < 1:3968509/150‑1 (MQ=255) ccaccGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAAcacca > 2:3845470/1‑150 (MQ=255) accGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCAcg < 1:2881151/150‑1 (MQ=255) cGAAAAGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCAcgcg < 1:4454774/150‑1 (MQ=255) accGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTc < 2:4060596/148‑1 (MQ=255) aaCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTc < 2:612285/150‑1 (MQ=255) aCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTCg > 2:2353190/1‑150 (MQ=255) aCGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTCg > 2:2273363/1‑150 (MQ=255) cGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTCgg > 2:2192446/1‑150 (MQ=255) | CTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAAAGGGAACGTGGATGATGTCTGCCGGTTTCGGCCCAAAGCCGTCGGAATATTTTGGCTGCCCACCCACCGAAACGGTAAACAGCGAGCGACCATGAAAAGCGTTATGGAAGGCAATAATTTTGGTTTTGAACGGGCTATGACGCACACAGGCGTAATGGCGTGCCAGTTTAAAGGCGGTTTCGTTAGCTTCCGTGCCGGAGTTCATAAACACCACGCGTTCGG > CP009273/3482946‑3483244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |