BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,538,325	G→T	14.5%	A29S (GCC→TCC)	gntX →	DNA catabolic protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,538,325	0	G	T	14.5%	974.8 / 102.2	299	A29S (GCC→TCC)	gntX	DNA catabolic protein
Reads supporting (aligned to +/- strand): ref base G (142/113); new base T (27/16); total (170/129)
Fisher's exact test for biased strand distribution p-value = 4.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 315 total aligned reads displayed.

CTTTGGTCTGCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATC  >  CP009273/3538176‑3538474

cTTTGGTCTGCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCAcgcg                                                                                                                                                       >  2:2903834/1‑150 (MQ=255)

     gTCTGCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCAcc                                                                                                                                                  <  2:1086261/150‑1 (MQ=255)

       cTGCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCg                                                                                                                                                <  1:1175964/150‑1 (MQ=255)

         gCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGca                                                                                                                                              <  1:1765901/150‑1 (MQ=255)

          ccaccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGcac                                                                                                                                             >  2:1992533/1‑150 (MQ=255)

          ccaccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGcac                                                                                                                                             >  1:736222/1‑150 (MQ=255)

          ccaccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGcac                                                                                                                                             >  1:829050/1‑150 (MQ=255)

           caccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGcaca                                                                                                                                            >  2:1156023/1‑150 (MQ=255)

           caccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGcaca                                                                                                                                            <  1:2309694/150‑1 (MQ=255)

           caccaGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGcaca                                                                                                                                            >  1:2616530/1‑150 (MQ=255)

              caGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGAt                                                                                                                                         >  2:1466162/1‑150 (MQ=255)

               aGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATa                                                                                                                                        <  2:2124128/150‑1 (MQ=255)

                 aTGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATaaa                                                                                                                                      >  2:3973336/1‑150 (MQ=255)

                  tGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATaaaa                                                                                                                                     <  2:3707020/150‑1 (MQ=255)

                   gTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAAc                                                                                                                                    <  1:824457/150‑1 (MQ=255)

                     tATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGt                                                                                                                                  >  1:3337322/1‑150 (MQ=255)

                      aTTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGtt                                                                                                                                 <  1:3491118/150‑1 (MQ=255)

                      aTTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGtt                                                                                                                                 >  1:638736/1‑150 (MQ=255)

                       ttCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTa                                                                                                                                >  1:1982871/1‑150 (MQ=255)

                        tCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTAt                                                                                                                               <  2:4287827/150‑1 (MQ=255)

                        tCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTAt                                                                                                                               <  2:1253992/150‑1 (MQ=255)

                        tCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTAt                                                                                                                               <  1:1517340/150‑1 (MQ=255)

                         cATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATg                                                                                                                              >  1:4196639/1‑150 (MQ=255)

                          aTCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGc                                                                                                                             <  2:1962954/150‑1 (MQ=255)

                          aTCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGc                                                                                                                             >  2:2382924/1‑150 (MQ=255)

                          aTCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGc                                                                                                                             >  1:559323/1‑150 (MQ=255)

                           tCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGcc                                                                                                                            <  1:2057494/150‑1 (MQ=255)

                                 aTTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAAt                                                                                                                      >  1:3031280/1‑150 (MQ=255)

                                 aTTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAAt                                                                                                                      >  2:2341033/1‑150 (MQ=255)

                                 aTTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAAt                                                                                                                      >  1:1845801/1‑150 (MQ=255)

                                     ttCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTgg                                                                                                                  <  2:221303/150‑1 (MQ=255)

                                     ttCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACAGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTgg                                                                                                                  <  2:2040553/150‑1 (MQ=255)

                                      tctcTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGa                                                                                                                 >  1:512251/1‑150 (MQ=255)

                                       ctctTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGAt                                                                                                                >  2:324865/1‑150 (MQ=255)

                                       ctctTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGAt                                                                                                                <  1:4394603/150‑1 (MQ=255)

                                         ctTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTa                                                                                                              >  2:963563/1‑150 (MQ=255)

                                         ctTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTa                                                                                                              >  1:4095083/1‑150 (MQ=255)

                                          ttttGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTAc                                                                                                             <  2:4212136/150‑1 (MQ=255)

                                            ttGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTAccc                                                                                                           <  1:2420551/150‑1 (MQ=255)

                                              gACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGc                                                                                                         >  2:2362938/1‑150 (MQ=255)

                                                cTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCca                                                                                                       <  1:3525749/150‑1 (MQ=255)

                                                 ttACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCcac                                                                                                      <  2:3005163/150‑1 (MQ=255)

                                                 ttACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCcac                                                                                                      >  1:4764880/1‑150 (MQ=255)

                                                   aCAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCcacac                                                                                                    >  2:607295/1‑150 (MQ=255)

                                                    cAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCcacaca                                                                                                   >  2:3514490/1‑150 (MQ=255)

                                                     aaGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCacacac                                                                                                  >  2:624132/1‑150 (MQ=255)

                                                      aGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCacacaca                                                                                                 >  1:4408614/1‑149 (MQ=255)

                                                       ggATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTc                                                                                                <  2:3079088/150‑1 (MQ=255)

                                                            aaCATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATc                                                                                           >  1:3289021/1‑150 (MQ=255)

                                                             aCATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCt                                                                                          <  1:324810/150‑1 (MQ=255)

                                                              cATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCtt                                                                                         >  2:509943/1‑150 (MQ=255)

                                                              cATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCtt                                                                                         >  1:3576719/1‑150 (MQ=255)

                                                               atatGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTc                                                                                        >  2:754316/1‑150 (MQ=255)

                                                                tatGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTcc                                                                                       >  1:1802228/1‑150 (MQ=255)

                                                                tatGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTcc                                                                                       >  2:1769870/1‑150 (MQ=255)

                                                                     tAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCg                                                                                  >  1:4051328/1‑150 (MQ=255)

                                                                        cAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTc                                                                               >  1:233565/1‑150 (MQ=255)

                                                                           tACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGct                                                                            <  2:3772653/150‑1 (MQ=255)

                                                                            aCCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGctg                                                                           <  1:801337/150‑1 (MQ=255)

                                                                             ccGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGctgc                                                                          >  2:4614971/1‑150 (MQ=255)

                                                                             ccGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGctgc                                                                          >  2:949167/1‑150 (MQ=255)

                                                                                ggATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGctgcctg                                                                       <  2:736222/150‑1 (MQ=255)

                                                                                  aTTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCa                                                                     <  1:2401520/150‑1 (MQ=255)

                                                                                  aTTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCa                                                                     >  1:104893/1‑150 (MQ=255)

                                                                                   ttATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGCTTTGTTCGGTCTGTTCACGCACCACCCGCACAGATAAAACGTTATGCCCACACAGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGctgcctgcca                                                                    >  1:4014311/1‑148 (MQ=255)

                                                                                   ttATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCCCAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGcggcctgcca                                                                    >  1:4014365/1‑148 (MQ=255)

                                                                                       gCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAAc                                                                >  2:4493341/1‑150 (MQ=255)

                                                                                         tGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAAccg                                                              <  2:4670610/150‑1 (MQ=255)

                                                                                           gCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAAccgcc                                                            <  1:2565602/150‑1 (MQ=255)

                                                                                               tGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGccc                                                        >  2:1549358/1‑150 (MQ=255)

                                                                                                 ccGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTg                                                      >  2:3302958/1‑150 (MQ=255)

                                                                                                  cGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTgg                                                     <  1:3429909/150‑1 (MQ=255)

                                                                                                    aaTGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCa                                                   <  2:2750401/150‑1 (MQ=255)

                                                                                                        ccACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGa                                               >  1:4650414/1‑150 (MQ=255)

                                                                                                         cACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCAGGCAAAGAc                                              >  1:4636480/1‑150 (MQ=255)

                                                                                                          aCTGGCGTTAGGTCATTGGGGGATTTGTTAGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCCCCACACACTCCCATCTTCCCTGCGGTCGCTGCCGGCAAAAACCGCCGCCCAGGCAAAGAca                                             >  1:3785673/1‑149 (MQ=255)

                                                                                                            tGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTAGGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTgg                                           <  2:2964918/150‑1 (MQ=255)

                                                                                                               cGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCa                                        <  1:3187683/150‑1 (MQ=255)

                                                                                                                 ttAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACg                                      <  1:4515586/150‑1 (MQ=255)

                                                                                                                 ttAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACg                                      <  1:2111941/150‑1 (MQ=255)

                                                                                                                   aGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGt                                    >  2:2253549/1‑150 (MQ=255)

                                                                                                                      tCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGc                                 <  1:2903834/150‑1 (MQ=255)

                                                                                                                       cATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGcc                                >  2:3615881/1‑150 (MQ=255)

                                                                                                                       cATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGcc                                <  2:4063953/150‑1 (MQ=255)

                                                                                                                               gATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATgc                        <  1:399415/150‑1 (MQ=255)

                                                                                                                                 tttGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATgcgc                      >  2:778995/1‑150 (MQ=255)

                                                                                                                                   tGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGcgccg                    <  2:279565/150‑1 (MQ=255)

                                                                                                                                    gTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGcgccgc                   >  2:1318245/1‑150 (MQ=255)

                                                                                                                                     ttCGGTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCGGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCgccgcc                  <  2:382441/150‑1 (MQ=255)

                                                                                                                                       cGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGt                >  1:4295913/1‑150 (MQ=255)

                                                                                                                                        ggTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGtt               >  2:3447591/1‑150 (MQ=255)

                                                                                                                                         gTCTGTTCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTa              <  1:3400790/150‑1 (MQ=255)

                                                                                                                                         gTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTa              <  2:3337322/150‑1 (MQ=255)

                                                                                                                                            tGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGt           >  1:1120576/1‑150 (MQ=255)

                                                                                                                                              ttCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTcc         >  2:3025600/1‑150 (MQ=255)

                                                                                                                                              ttCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTcc         <  2:813857/150‑1 (MQ=255)

                                                                                                                                               tCACGCTCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCg        >  1:4359893/1‑150 (MQ=255)

                                                                                                                                                    cgcCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTAt   >  2:4359724/1‑150 (MQ=255)

                                                                                                                                                    cgcCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTAt   >  2:1894045/1‑150 (MQ=255)

                                                                                                                                                    cgcCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTAt   >  2:2641357/1‑150 (MQ=255)

CTTTGGTCTGCCACCAGATGTTATTCATCCGCTATTGTTCTCTTTTGACTTACAAGGATGAACATATGCTAACAGTACCGGGATTATGCTGGCTATGCCGAATGCCACTGGCGTTAGGTCATTGGGGGATTTGTTCGGTCTGTTCACGCGCCACCCGCACAGATAAAACGTTATGCCCACAATGTGGATTACCCGCCACACACTCCCATCTTCCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATC  >  CP009273/3538176‑3538474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`