| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 312,532 | G→A | 93.3% | pseudogene (349/684 nt) | ykgA ← | pseudogene, AraC family;putative regulator; Not classified; putative ARAC‑type regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 312,532 | 0 | G | A | 93.3% | 651.3 / 27.4 | 195 | pseudogene (349/684 nt) | ykgA | pseudogene, AraC family;putative regulator; Not classified; putative ARAC‑type regulatory protein |
| Reads supporting (aligned to +/- strand): ref base G (8/5); new base A (108/74); total (116/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
CCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTT > CP009273/312385‑312677 | ggTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTgg < 1:2838163/150‑1 (MQ=255) gTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGc > 1:4767649/1‑150 (MQ=255) gTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGc > 1:1343711/1‑150 (MQ=255) tGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCg < 2:1638482/150‑1 (MQ=255) tGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCg < 1:2019885/150‑1 (MQ=255) gATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCgg < 1:154578/150‑1 (MQ=255) aTTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGt < 2:2171575/150‑1 (MQ=255) aTTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGt > 1:3620510/1‑150 (MQ=255) tATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTAtt > 2:4781279/1‑150 (MQ=255) cacTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACgggg > 1:4087013/1‑150 (MQ=255) cTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGgag > 1:1086462/1‑150 (MQ=255) cTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGgag > 1:1227246/1‑150 (MQ=255) cTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGgag > 1:3451889/1‑150 (MQ=255) ttCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGgaga < 2:2823198/150‑1 (MQ=255) aaTGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGagca < 2:1408520/150‑1 (MQ=255) aTGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGagcag < 1:2031108/150‑1 (MQ=255) gTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGcc > 1:4215926/1‑150 (MQ=255) gTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGcc < 2:4139214/150‑1 (MQ=255) tCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCg < 1:3430088/150‑1 (MQ=255) cATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGa > 2:2936995/1‑150 (MQ=255) tatTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAAt < 1:1457909/150‑1 (MQ=255) aaaTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACtt > 2:4459024/1‑150 (MQ=255) aaaTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACtt > 2:2320932/1‑150 (MQ=255) aaTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACttt > 2:3632899/1‑150 (MQ=255) aTGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACtttt > 2:1140814/1‑150 (MQ=255) ttGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAAt > 2:2219430/1‑150 (MQ=255) tGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAAtt < 2:328945/150‑1 (MQ=255) gCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTc < 2:207775/150‑1 (MQ=255) aaaTAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGc > 1:1688234/1‑150 (MQ=255) aTAGGTGTCTCAGGAAAGTTGATTCATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTg < 2:3166664/150‑1 (MQ=255) tatgtgtCTCAGGAAAGTTGATTAATCGACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGa < 2:2193659/147‑1 (MQ=255) tAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGa > 2:1424054/1‑150 (MQ=255) tAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGa < 1:2355363/150‑1 (MQ=255) ggTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAAt > 2:1733359/1‑150 (MQ=255) ggTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAAt < 2:2391526/150‑1 (MQ=255) gtCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGAc > 1:4613038/1‑150 (MQ=255) gtCTCAGGAAAGTTGATTAATCTACACTCCGTATTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGAc < 1:1660613/150‑1 (MQ=255) tcAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgc > 2:4561630/1‑150 (MQ=255) tcAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTAGCGGCTGAATGActgc > 2:2616760/1‑150 (MQ=255) aGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgctg > 1:4554465/1‑150 (MQ=255) aGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgctg > 1:2153410/1‑150 (MQ=255) aGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgctg < 2:330870/150‑1 (MQ=255) aGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGActgctg < 2:2725190/150‑1 (MQ=255) gTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATc > 2:4336063/1‑150 (MQ=255) ttGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑a > 2:1518057/1‑150 (MQ=255) ttAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAAt < 1:394745/150‑1 (MQ=255) ttAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAAt < 2:2837164/150‑1 (MQ=255) tAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGACTAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATg > 2:4364891/1‑150 (MQ=255) tAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATg > 2:3879816/1‑150 (MQ=255) cTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCaaa > 2:496503/1‑150 (MQ=255) tACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAag > 1:2471806/1‑150 (MQ=255) tACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAag > 1:639250/1‑150 (MQ=255) cacTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAagag < 2:4661414/150‑1 (MQ=255) acTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAagaga > 1:666523/1‑150 (MQ=255) cTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAagagag < 1:1422567/150‑1 (MQ=255) tCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGt > 1:2242032/1‑150 (MQ=255) cGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATCAAAAATGCAAAGAGAGTg > 2:3588397/1‑150 (MQ=255) cGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGc > 1:2733445/1‑150 (MQ=255) gTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCa > 1:837536/1‑150 (MQ=255) ttttGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAata < 2:1088025/150‑1 (MQ=255) tGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATa < 1:2906064/150‑1 (MQ=255) tATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGAttt < 1:3124998/150‑1 (MQ=255) tATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGAttt > 1:1126315/1‑150 (MQ=255) ttAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTcg < 1:2301060/150‑1 (MQ=255) tAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTcgc < 2:893177/150‑1 (MQ=255) aaaaaaGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTcgcg < 1:1616011/150‑1 (MQ=255) aaaaGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGt < 2:3590389/150‑1 (MQ=255) aaaGAAGGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTg > 2:647452/1‑150 (MQ=255) aagaagGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGa > 1:1468068/1‑150 (MQ=255) aagaagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGa < 1:3352150/150‑1 (MQ=255) gaagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGc < 1:3259012/150‑1 (MQ=255) gaagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGc < 1:3322926/150‑1 (MQ=255) gaagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGc < 1:930850/150‑1 (MQ=255) aagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGcc > 2:1315285/1‑150 (MQ=255) aagGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGcc > 1:243470/1‑150 (MQ=255) agGGAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCg < 2:2664266/150‑1 (MQ=255) gggAAGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCgg > 2:1164529/1‑150 (MQ=255) ggAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGa > 2:1886765/1‑150 (MQ=255) aaGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACa > 1:13322/1‑150 (MQ=255) aaGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACa > 2:2136282/1‑150 (MQ=255) aGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACaa > 2:2557666/1‑150 (MQ=255) aGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACaa > 2:2163326/1‑150 (MQ=255) aGATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACaa > 2:2163552/1‑150 (MQ=255) gATATTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAg > 1:1091020/1‑150 (MQ=255) atatTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGa > 1:4199959/1‑150 (MQ=255) tatTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGaa < 2:3814486/150‑1 (MQ=255) atTTGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAAt > 1:4307372/1‑150 (MQ=255) ttGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATgg > 2:3162028/1‑150 (MQ=255) ttGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATgg > 2:2911751/1‑150 (MQ=255) tGCGAGATCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATggc < 1:1518057/150‑1 (MQ=255) gaTCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCAc < 2:4415220/150‑1 (MQ=255) gaTCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCAc > 2:4573011/1‑150 (MQ=255) aTCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACg < 2:2423654/150‑1 (MQ=255) tCCCAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGa > 1:1251133/1‑150 (MQ=255) cccAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGAc > 2:2237306/1‑150 (MQ=255) cccAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGAc > 2:1653878/1‑150 (MQ=255) ccAATAATCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACa < 2:2172919/150‑1 (MQ=255) aataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACaaa > 1:1805886/1‑150 (MQ=255) aataatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACaaa > 1:264121/1‑150 (MQ=255) taatCACAGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGc > 2:766922/1‑150 (MQ=255) | CCGGTGATTTATTCGACACTTCAATGTCATATTTAAATGAGTTGCCAAAAATAGGTGTCTCAGGAAAGTTGATTAATCTACACTCCGTCTTTTGCTGTTGACGTATTAAAAAAGAAGGGAAGATATTTGCGAGATCCCAATAATCACGGTGGCGGTATTCACGGGGAGAGCAGCCGAATAACTTTTTAAATTCGCGGCTGAATGACTGCTGTGAATC‑AAAATGCAAAGAGAGTGCAATATCAAGCATAGATTTCGCGGTGAGCCGGACAAGAATGGCGGCACGACAAAGCCTT > CP009273/312385‑312677 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |