| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,896,189 | G→T | 6.8% | T291T (ACC→ACA) | bglB ← | cryptic phospho‑beta‑glucosidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,896,189 | 0 | G | T | 6.8% | 859.5 / 28.3 | 227 | T291T (ACC→ACA) | bglB | cryptic phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base G (138/73); new base T (10/6); total (148/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 232 total aligned reads displayed.
CAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896041‑3896338 | cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 1:739995/1‑150 (MQ=255)cAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACgg > 1:993357/1‑150 (MQ=255) cGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATg > 1:3165823/1‑150 (MQ=255) ggATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGt > 1:2345774/1‑150 (MQ=255) ggATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGt > 1:2103685/1‑150 (MQ=255) cAATTTGCCACCCCCACTCTGAACTTTTCAGTTGCGGATTGGGGATAATATTCTGTATGTTGCCCTGCGAATTTTTATTACTGCTTT‑CGTCGTGGGAAACAAAACCAGTCATGTAATAACTAAAAGAGATGAACTCGACTGTATGTTTTa < 2:2350877/150‑1 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTaa > 2:2827001/1‑150 (MQ=255) aTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGCTCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaaa > 2:1155642/1‑150 (MQ=255) aTTTCCCACCCCCACTCTGAACTTTTCATATGCGGTTTGGTTATAATATTCATTTTTTTGCCCTGCTATTTTTTATTAATTCTGT‑CGTCGTGGGAAACACACCCTGTCATGTAATAAATAAAAGAGATTAAATCGACGGTATGTTTTaaa < 2:147777/150‑1 (MQ=255) aTTGGCCACCCCCACTCTTAACTTTTCAGTTGCGGTTTGGGTATCATATTCAGTATGTTGCCCTGCGAATTTTTATTAATGCTTT‑CGTGGTGGTAAACACAACCAGTCATTTAATAACTAAAAGAGATCAACTCGACGGTATGTTTTaaa < 2:145792/150‑1 (MQ=255) ccACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttc > 1:585148/1‑150 (MQ=255) cACCCCCACTCTTAACTTTTCAGATGCGGTTTGGGGATCATATTCATTATGTTGCCCTGCGAATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttct < 2:1934569/150‑1 (MQ=255) cACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttct > 1:1615557/1‑150 (MQ=255) cACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttct > 1:4351605/1‑150 (MQ=255) ccccACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCg > 2:3719318/1‑150 (MQ=255) ctGAACTTTTCTGTTGGGTTTTGGGGATCATTTTCTGTTTGTTGCCCGGCGTTTTTTTTTTCTTGTTTT‑GGGCGTGGTAAACACACCCCGTCTTTTACTAACTAACAGAGTTTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACttt < 2:26961/150‑1 (MQ=255) ttttCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCa > 2:1657320/1‑150 (MQ=255) tttCTGATGCGGTTTGGGTATAATTTTCATTTTGTTGCCCTGCGAATTTTTATTATTGCTTT‑CGTGGTGGTAAACACAACCAGTCATTTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCAt < 2:1989263/150‑1 (MQ=255) gttGCGGTTTGGGTATCATTTTCTGTTTGTTGCCCTGCGATTTTTTATTATGGCTTT‑CGTCGTGGTAAACACAACCAGTCATGTAATAACTAAAAGAGAGGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCaa < 2:4344337/148‑1 (MQ=255) cGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGt > 1:1011103/1‑150 (MQ=255) ttttGGGTATCATATTCTTTTTTTTGCCGTGCTATTTTTTATTATTGTTTT‑CGTGGTGGTAAAAACAACCAGAAATTTAATAAATAAATTTTTTTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGa < 1:257674/148‑1 (MQ=255) aTTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat > 2:86968/1‑150 (MQ=255) aTTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat > 1:395391/1‑150 (MQ=255) ttGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGata > 2:180244/1‑150 (MQ=255) ggcataatatTCAGTATTTTCCCCTGCGAATTTTTATTATTCCTTT‑CGTCGTGGTAAACAAAACAATAAATTTAATAAATAAAAGATATCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATtg < 1:1948486/144‑1 (MQ=255) tatTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcgc > 2:2873870/1‑150 (MQ=255) tatTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTcgc > 1:2833963/1‑150 (MQ=255) ttCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCgg > 1:2700778/1‑150 (MQ=255) cAGTTTTTTGCCCTGCGAATTTTTATAAATGCTTG‑CGGCGTGGTAAACACAACCAGGCATGTAAAAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaa < 2:4108478/150‑1 (MQ=255) cAGTAGGGTGCCCTGCGAATTTTTATTAATGCTTG‑CGTCGTGGGAAACACAACCAGTCATTTAATAACTAAAAGAGAGGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaa < 2:1746384/150‑1 (MQ=255) tttggtGCCGTGCG‑ATTTTTTTTAATGGTTTGCGTGTTGGTAAACACACCAAGACTTGAAATAACAAAAACTTATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaagaa < 1:2955363/145‑1 (MQ=255) ttttGCCCTGCTATTTTTTATTATTGCTTT‑CGTCGTGGTAAACACAACCAGTCATGTAATAAATAAAAGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 2:2483802/148‑1 (MQ=255) tGTTGCCCTGCTAATTTTTATTAATGCTTT‑CGGCGTGGTAAACACAACCAGTCATTAAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 2:2955262/150‑1 (MQ=255) tGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc > 2:2046748/1‑150 (MQ=255) tGTTGCCCTGCGATTTTTTATTAAGGCTTT‑CGTCGTGGGAAACACAACCAGTCATTTAAAAAATAAAAGATATTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc < 1:1155642/150‑1 (MQ=255) tttGCCCTGCTAATTTTTATTATTGCTTT‑GGTGGTGGAAAACACAACCAGCATTTTAATAACAAAACCATATCAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACg < 1:3733873/149‑1 (MQ=255) gTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACg > 2:2127202/1‑150 (MQ=255) gTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACg > 2:1074335/1‑150 (MQ=255) tGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGACGAAACGCt > 1:1882810/1‑150 (MQ=255) ccTGCGTTTTTTTATTATGGCTTG‑CGGGGTGGCAAACACACCCCGTCATTAAAAAACAAAAAGACAACAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa < 1:4006743/150‑1 (MQ=255) ccTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCa > 2:424597/1‑150 (MQ=255) tGCGCATTTTTATTAATGCTTT‑CGTCGTGGTAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCata < 2:789472/150‑1 (MQ=255) gcgcATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCatat > 1:2884416/1‑150 (MQ=255) cgcATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGACGAAACGCTGCAtata > 2:3065707/1‑150 (MQ=255) atttttttttAATGCTTT‑CTTCGTGGTAAACACAACCAGTAATGTAATAACTAAAAGATATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGc < 2:699151/148‑1 (MQ=255) aTTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGcc > 1:4242209/1‑150 (MQ=255) aTTTTTATTAATGCTTA‑CGTCGTGTTAAACACAACCAGACATTTAATAACAAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGcc < 2:2594718/150‑1 (MQ=255) tttttATTAATTCTTT‑CGTCGTGTGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGAATGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGTTGATATTGTGGTCTCGGAAGAAACGCTGCATATAGCCg > 1:3588928/1‑150 (MQ=255) tttttATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCg > 1:883970/1‑150 (MQ=255) ttttATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCgg > 2:436941/1‑150 (MQ=255) tattaATGCTTT‑CGTCGTGGGAAACACAACCCGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGAt < 2:3143893/150‑1 (MQ=255) tattaATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGAt > 1:3678952/1‑150 (MQ=255) attaATGCTTT‑CGTCGTGGTAAACACAACCAGTCATTTAATAACTAAAACAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATa < 2:4614138/150‑1 (MQ=255) aTGCGTT‑CGTCGGGGGAAAAACAACCAGACATTTAATAACTAAAATCTATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTgg < 2:1367904/150‑1 (MQ=255) gCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGcc > 1:541308/1‑150 (MQ=255) tt‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcg > 2:1492382/1‑150 (MQ=255) tt‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcg > 1:2073410/1‑150 (MQ=255) tt‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcg > 1:3552872/1‑150 (MQ=255) t‑cgtcgTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcgc > 1:2776709/1‑150 (MQ=255) tcgtgttGGTAAACACAACCTGTCATGTAATAACTAAAAGATATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcgc < 2:4763174/144‑1 (MQ=255) tGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGa > 2:3688055/1‑150 (MQ=255) gggAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGaa > 2:4469586/1‑150 (MQ=255) ggAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAAc > 2:250128/1‑150 (MQ=255) taaaCACAACCAGTCATTTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACa < 2:2068814/149‑1 (MQ=255) aaaaaaaaCCAGTCATTTAATAACAAAAAGACATCAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACAt < 1:4612702/144‑1 (MQ=255) aaaCACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACAt > 1:3203436/1‑150 (MQ=255) caacaaGTAATTTAAAAAAAAAAAGATATCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCa < 1:3011656/150‑1 (MQ=255) aaCCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaa > 2:409207/1‑150 (MQ=255) ccctgTCTTGTAATAAAAAAATTAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaaa < 1:4774323/146‑1 (MQ=255) aCCTGTCTTGTAATAAATAAATGATTTTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaaa < 1:1475797/150‑1 (MQ=255) ccAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAg > 2:4116295/1‑150 (MQ=255) cAGTCTTGTATTAAATAAAAGTTATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGa < 2:739931/150‑1 (MQ=255) cAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGTCGGGATACTGGCCACGCGCCTGAACATCACCAAAGa > 2:2266477/1‑150 (MQ=255) ttttaataaCTAAAAGATATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATc < 2:3552872/147‑1 (MQ=255) aTGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATc > 2:705677/1‑150 (MQ=255) tGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATcc > 1:1910824/1‑150 (MQ=255) taataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAg > 1:3209962/1‑150 (MQ=255) taataaATAAATGATATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAg < 1:2541080/150‑1 (MQ=255) ataaCTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAgcg > 2:4658434/1‑150 (MQ=255) aaCTAAAATTGTTGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGcc < 2:3498195/150‑1 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 1:3798984/1‑150 (MQ=255) aaGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtct < 2:311038/150‑1 (MQ=255) aaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAg > 1:1841550/1‑140 (MQ=255) agagATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtctc > 1:978498/1‑150 (MQ=255) gagaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTctct > 1:3384295/1‑150 (MQ=255) tgaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt < 1:808381/149‑1 (MQ=255) atattaaaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt < 1:807987/145‑1 (MQ=255) agaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt > 2:274449/1‑150 (MQ=255) agaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt > 2:3313735/1‑150 (MQ=255) agaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt > 2:3021797/1‑150 (MQ=255) aTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTcc > 2:1303257/1‑150 (MQ=255) tGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGACACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCa > 2:4543219/1‑150 (MQ=255) gAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCAt < 2:585148/150‑1 (MQ=255) aaaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATg > 2:1112149/1‑150 (MQ=255) aTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGc > 1:671455/1‑150 (MQ=255) tCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGcc < 1:4644918/150‑1 (MQ=255) cGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCt > 2:4029906/1‑150 (MQ=255) cGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCt < 2:3362552/150‑1 (MQ=255) cGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCa > 2:1828038/1‑150 (MQ=255) ggTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCaa < 2:1223178/150‑1 (MQ=255) | CAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTT‑CGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896041‑3896338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |