Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,898,349 G→A 5.7% F203F (TTC→TTT bglF ← fused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,898,3490GA 5.7% 948.8 / 29.1 262F203F (TTC→TTTbglFfused beta‑glucoside‑specific PTS enzymes: IIA component/IIB component/IIC component
Reads supporting (aligned to +/- strand):  ref base G (125/122);  new base A (10/5);  total (135/127)
Fisher's exact test for biased strand distribution p-value = 2.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 266 total aligned reads displayed.

ATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAA  >  CP009273/3898200‑3898498
                                                                                                                                                     |                                                                                                                                                     
 tCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGa                                                                                                                                                      >  1:1994293/1‑150 (MQ=255)
    gACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAAt                                                                                                                                                   >  2:4400355/1‑150 (MQ=255)
    gACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAAt                                                                                                                                                   <  2:1161392/150‑1 (MQ=255)
      cATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATcc                                                                                                                                                 >  1:297355/1‑150 (MQ=255)
       aTAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCa                                                                                                                                                <  2:506699/150‑1 (MQ=255)
       aTAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCa                                                                                                                                                <  1:2354606/150‑1 (MQ=255)
            aaTGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGcccc                                                                                                                                           <  1:2776239/150‑1 (MQ=255)
             aTGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCa                                                                                                                                          <  1:129218/150‑1 (MQ=255)
              tGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAg                                                                                                                                         <  2:186399/150‑1 (MQ=255)
               ggTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAgc                                                                                                                                        >  2:1260294/1‑150 (MQ=255)
                 tgtgAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAgcgc                                                                                                                                      <  2:4429893/150‑1 (MQ=255)
                   tgAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCAt                                                                                                                                    >  1:4371197/1‑150 (MQ=255)
                    gaagaaATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATc                                                                                                                                   >  1:4318893/1‑150 (MQ=255)
                     aagaaATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATcc                                                                                                                                  >  2:264617/1‑150 (MQ=255)
                         aaTTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCtt                                                                                                                              <  1:2838277/150‑1 (MQ=255)
                         aaTTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCtt                                                                                                                              <  2:2869266/150‑1 (MQ=255)
                          aTTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCttt                                                                                                                             <  2:142947/150‑1 (MQ=255)
                          aTTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCttt                                                                                                                             <  2:2053270/150‑1 (MQ=255)
                           tttttGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGCCCCAGCGCATCCGCtttt                                                                                                                            <  2:3645972/150‑1 (MQ=255)
                            ttttGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCttttt                                                                                                                           <  2:3570145/150‑1 (MQ=255)
                             tttGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTg                                                                                                                          <  1:1143814/150‑1 (MQ=255)
                             tttGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTg                                                                                                                          <  1:3742985/150‑1 (MQ=255)
                                 aTTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCg                                                                                                                      >  2:1943540/1‑150 (MQ=255)
                                   tGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGtt                                                                                                                    <  2:4074769/150‑1 (MQ=255)
                                      cGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTtctc                                                                                                                 <  2:3299666/150‑1 (MQ=255)
                                       gACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCg                                                                                                                >  2:1567946/1‑150 (MQ=255)
                                       gACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCg                                                                                                                >  2:1567319/1‑150 (MQ=255)
                                       gACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCg                                                                                                                >  2:3975637/1‑150 (MQ=255)
                                         cGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGaa                                                                                                              <  1:78280/150‑1 (MQ=255)
                                         cGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGaa                                                                                                              <  1:2474271/150‑1 (MQ=255)
                                          ggTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGaaa                                                                                                             >  1:3202012/1‑150 (MQ=255)
                                          ggTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGaaa                                                                                                             >  1:1724798/1‑150 (MQ=255)
                                              aCCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAg                                                                                                         >  2:3340575/1‑150 (MQ=255)
                                              aCCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAg                                                                                                         >  1:4507767/1‑150 (MQ=255)
                                                cACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTc                                                                                                       <  2:3794914/150‑1 (MQ=255)
                                                   gCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGa                                                                                                    <  2:852328/150‑1 (MQ=255)
                                                     aTTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAAt                                                                                                  >  1:850899/1‑150 (MQ=255)
                                                       tAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGACAGCAGTCAGAATTa                                                                                                >  2:4489106/1‑150 (MQ=255)
                                                       tAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTa                                                                                                <  1:4676112/150‑1 (MQ=255)
                                                       tAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTa                                                                                                <  2:2027286/150‑1 (MQ=255)
                                                       tAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTa                                                                                                >  2:698368/1‑150 (MQ=255)
                                                       tAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTa                                                                                                >  2:1066842/1‑150 (MQ=255)
                                                        aaGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTaa                                                                                               >  2:4290566/1‑150 (MQ=255)
                                                           tCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATgg                                                                                            <  2:4123016/150‑1 (MQ=255)
                                                            cGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGa                                                                                           <  1:1657575/150‑1 (MQ=255)
                                                                gTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCa                                                                                       <  1:3444351/150‑1 (MQ=255)
                                                                 ttCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCAc                                                                                      >  1:1083184/1‑150 (MQ=255)
                                                                   ccAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTa                                                                                    >  2:307757/1‑150 (MQ=255)
                                                                     aGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAAc                                                                                  >  2:2496233/1‑150 (MQ=255)
                                                                      gAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACg                                                                                 >  1:1463818/1‑150 (MQ=255)
                                                                      gAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACg                                                                                 <  1:3253507/150‑1 (MQ=255)
                                                                      gAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACg                                                                                 <  2:2087952/150‑1 (MQ=255)
                                                                       aaTGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGc                                                                                >  1:1182947/1‑150 (MQ=255)
                                                                         tgctgcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTc                                                                              >  1:1107187/1‑150 (MQ=255)
                                                                           ctgcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTcca                                                                            >  2:1025653/1‑150 (MQ=255)
                                                                            tgcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGACTACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTccac                                                                           >  2:3327157/1‑150 (MQ=255)
                                                                            tgcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTccac                                                                           >  2:1692691/1‑150 (MQ=255)
                                                                             gcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTccacc                                                                          <  2:3231727/150‑1 (MQ=255)
                                                                             gcACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTccacc                                                                          <  2:1090722/150‑1 (MQ=255)
                                                                               acaACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCaa                                                                        <  1:476142/150‑1 (MQ=255)
                                                                               acaACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCaa                                                                        <  2:3926690/150‑1 (MQ=255)
                                                                                    cAGGCAGAAAAAATAATGGGAATAACCGATGAAGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCAcc                                                                   <  2:4650851/150‑1 (MQ=255)
                                                                                     aGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGAAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCa                                                                  >  2:2669240/1‑150 (MQ=255)
                                                                                      ggCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCAt                                                                 <  1:3875739/150‑1 (MQ=255)
                                                                                      ggCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCAt                                                                 <  2:4764106/150‑1 (MQ=255)
                                                                                       gCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATg                                                                <  1:4500897/150‑1 (MQ=255)
                                                                                       gCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATg                                                                <  2:1671400/150‑1 (MQ=255)
                                                                                        cAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATgg                                                               <  1:2238776/150‑1 (MQ=255)
                                                                                         aGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGc                                                              <  2:2142736/150‑1 (MQ=255)
                                                                                          gAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCa                                                             >  1:54813/1‑150 (MQ=255)
                                                                                            aaaaaTAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGt                                                           >  2:2387980/1‑150 (MQ=255)
                                                                                            aaaaaTAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGt                                                           >  1:3565300/1‑150 (MQ=255)
                                                                                            aaaaaTAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGt                                                           <  1:657468/150‑1 (MQ=255)
                                                                                             aaaaTAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTa                                                          >  2:4508867/1‑150 (MQ=255)
                                                                                             aaaaTAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTa                                                          >  2:156128/1‑150 (MQ=255)
                                                                                               aataatGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTaaa                                                        >  2:1677818/1‑150 (MQ=255)
                                                                                                 taatGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATg                                                      >  2:171790/1‑150 (MQ=255)
                                                                                                       gAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTAc                                                >  2:2239263/1‑150 (MQ=255)
                                                                                                          tAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTAccgc                                             >  1:4161540/1‑150 (MQ=255)
                                                                                                           aaCCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTAccgcc                                            <  2:762140/150‑1 (MQ=255)
                                                                                                             ccGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGa                                          >  2:2301514/1‑150 (MQ=255)
                                                                                                                 tGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCg                                      <  1:2417093/150‑1 (MQ=255)
                                                                                                                      aGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTcc                                 >  1:4040549/1‑150 (MQ=255)
                                                                                                                        tAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTcccc                               <  1:2105186/150‑1 (MQ=255)
                                                                                                                         aaTTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCcg                              >  2:3808311/1‑150 (MQ=255)
                                                                                                                          aTTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCcgc                             >  1:1901089/1‑150 (MQ=255)
                                                                                                                            tCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCgg                           >  2:2110143/1‑150 (MQ=255)
                                                                                                                              aacaaTGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGgtg                         >  2:500053/1‑150 (MQ=255)
                                                                                                                                caaTGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACACTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTa                       >  1:4259423/1‑150 (MQ=255)
                                                                                                                                 aaTGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTAt                      <  1:3505886/150‑1 (MQ=255)
                                                                                                                                       aCCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAgg                <  2:1792052/150‑1 (MQ=255)
                                                                                                                                          ggAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGAtt             <  2:2815052/150‑1 (MQ=255)
                                                                                                                                           gAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTa            <  2:1231255/150‑1 (MQ=255)
                                                                                                                                           gAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTa            >  1:4212496/1‑150 (MQ=255)
                                                                                                                                            aaTACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTAt           >  1:2311722/1‑150 (MQ=255)
                                                                                                                                             aTACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATc          >  2:2992301/1‑150 (MQ=255)
                                                                                                                                              tACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCg         <  1:4210216/150‑1 (MQ=255)
                                                                                                                                                 ccAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGAAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGga      >  1:3108143/1‑150 (MQ=255)
                                                                                                                                                   aGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGgacg    >  1:217788/1‑148 (MQ=255)
                                                                                                                                                    ggAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGgaaga   <  1:760919/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ATCAGACATAGCAATGGTGTGAAGAAATTTTTGATTGCCGACGGTAACCACGCATTAAGTCGGCGTTCCAGAATGCTGCACAACCAGGCAGAAAAAATAATGGGAATAACCGATGACGAGTAATTCAACAATGTGACCGGAATACCCAGGAAATCCAGCCCCAGCGCATCCGCTTTTTGCCCGTTCTCGAAAGCAGTCAGAATTAATGGATGCACTAACGCTCCACCAATCACCATGGCAGTAAATGGATTACCGCCGAAGCGTTTCCCCGCGGTGTATCCCAGGATTATCGGGAAGAA  >  CP009273/3898200‑3898498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: