| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,304,132 | G→T | 8.4% | intergenic (+118/+29) | yjdP → / ← phnP | putative periplasmic protein/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,304,132 | 0 | G | T | 8.4% | 1214.7 / 56.5 | 337 | intergenic (+118/+29) | yjdP/phnP | putative periplasmic protein/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base G (158/150); new base T (19/10); total (177/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 344 total aligned reads displayed.
AGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCGAGCGG > CP009273/4303983‑4304281 | agCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg > 2:1241823/1‑150 (MQ=255) ggAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg < 2:3438340/150‑1 (MQ=255) gagaATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACTATCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGTGAggg > 2:797239/1‑150 (MQ=255) aTGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGCGAGGGGTAGGGTGAGGGGGcc > 2:3906678/1‑150 (MQ=255) tGGAAGATGAGTATGGGCGTTGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCa < 1:1750956/150‑1 (MQ=255) ggAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAg < 2:1838607/150‑1 (MQ=255) aaGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACACTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcg > 2:4304208/1‑150 (MQ=255) aGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcgc > 1:3327445/1‑150 (MQ=255) aGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcgc > 1:2012433/1‑150 (MQ=255) tGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGca > 2:349683/1‑150 (MQ=255) tttttGGGGGATGTGGTTGGTTTTGGAGCTGGCATCGCCCCTCACCCCAAT‑GGGGAGTGGGATAAAACGTGCGAATTTTTCATTATCGAGCACATTCGGTCCCCTCGCCCCTGTGGGGTGTGGGTTTGGGTGTGGGGGCCAGCGCGcaca < 2:1996195/146‑1 (MQ=255) aGTATGGGCGATGCGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGcaca < 1:4391200/150‑1 (MQ=255) gtttGGGCTATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGTGGGTTAGGGTGAGGGGGCCAGCGCGCACAt < 1:668605/147‑1 (MQ=255) aTGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTc < 2:2481837/150‑1 (MQ=255) ggCGTTGAGGTTGGGTAGGGAGCAGGAATCGCCCCTCACCCCAAG‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGTGGGGGCCAGCGCGCACATTCCct < 1:4657435/150‑1 (MQ=39) ggCGATGTGTTTGGGTATGGAGCAGGCCTCGCCCCTCACCCCATT‑GGGGAGTGGTATAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCct < 1:4180972/150‑1 (MQ=38) ggCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCATG‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCct < 2:1736087/150‑1 (MQ=255) ggCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGTGAGGGTTTGGGTGAGGGGGCCAGCGCGCACATTCCct < 2:898039/150‑1 (MQ=255) cgttgtggTGGGGTATGGCGCAGGAAGCGCCCCTCACCCCATG‑GGGGTTTGGGACAAAACGCGCGAAATATTAAATATCTAGCAAAATCGGTCCCCTCGCCCCTCTGGGGTGAGGGTTTGGGTGTGGGGGCCAGCGCGCACATTCCctct < 1:2412168/144‑1 (MQ=255) cGATGTGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCctct < 1:3098702/150‑1 (MQ=255) gATGAGGTTGGGTCTGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCtctc > 1:2813617/1‑150 (MQ=255) gATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGTAGTGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCtctc < 2:1587114/150‑1 (MQ=255) gATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCtctc < 2:569538/150‑1 (MQ=255) gATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACAGTCCCtctc > 2:4617990/1‑150 (MQ=255) ggTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCAc < 1:1119171/150‑1 (MQ=255) gggTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCa < 2:2772888/150‑1 (MQ=255) gggTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCa < 1:1087629/150‑1 (MQ=255) aTGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCAcccc > 1:3852641/1‑150 (MQ=255) ggcgcaggcagCGCCCCTCCCCCCAAG‑GGGGTGAGGGATAAAACGAGCGCAATATTCAATATCGAGAACAATCGGTCCCCTCCCCCCTCTGGGTTGTGGGTTTGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCaa < 1:270887/147‑1 (MQ=255) gAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAAt > 2:3369080/1‑150 (MQ=255) gAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAAt < 2:2314279/150‑1 (MQ=255) aGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTcc < 2:4105624/150‑1 (MQ=255) aGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTcc > 2:3961943/1‑150 (MQ=255) aGGCATCGCCCCTCACCCCAAG‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTcc < 1:2181872/150‑1 (MQ=255) acccccccTC‑CCCCAATGGGGGTGCGGGATAACACGAGCGAAATATTCAATATCGCGCACAATCGGTCCCCTCGCCCCTGTGGTGTGTGGGTTTGGGTGGGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatcc < 1:1216038/146‑1 (MQ=255) aTCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCCGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatcc > 2:1045799/1‑150 (MQ=255) aTCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTccatcc < 2:3224375/150‑1 (MQ=255) cccTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCa < 2:705438/150‑1 (MQ=255) cACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAcc > 2:1418266/1‑150 (MQ=255) ccccAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCCCCCCACTCTCCATCCCATCAAAcccc > 2:3576287/1‑150 (MQ=255) ccccAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAcccc > 1:2091705/1‑150 (MQ=255) aaT‑GGGGAGAGGGATAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGTAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCt < 1:3084469/150‑1 (MQ=255) aaT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCt > 1:1220347/1‑150 (MQ=255) aaT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCt > 1:127549/1‑150 (MQ=255) aT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCCCCATCCCATCAAACCCCACCTc < 2:4669204/150‑1 (MQ=255) gagggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCt < 2:4045827/150‑1 (MQ=255) tgggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTGTGGGGAGAGGGTTTGGGTGCGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTg < 1:3655228/149‑1 (MQ=255) agggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCCCCTCAAACCCTg > 1:3998630/1‑150 (MQ=255) gggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGa < 1:1568538/150‑1 (MQ=255) gagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACg > 1:817006/1‑150 (MQ=255) taaaaCGAGCGAAATATTCAATATCGAGCACAATGGGTCCCCTCGCCCCTCTGGGGAGAGGTTTAGGGTGTGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGt < 1:1391060/149‑1 (MQ=255) aaCGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGt < 1:2568643/150‑1 (MQ=255) aaCGAGCGCAATATTCAATATCGAGCACAATAGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCAAAAACTCCATCCCATCAAACCCCACATAAAACACTGACGGTAGt > 1:3894632/1‑150 (MQ=38) aCGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTg < 1:2337216/150‑1 (MQ=255) cGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGc > 1:4581154/1‑150 (MQ=255) cGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGc > 2:133195/1‑150 (MQ=255) gctcAATTTTCAATATCGAGCACAATGGGGCCCCTCGCCCCTGGGGGTTGTGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGtt < 1:2849068/147‑1 (MQ=255) aaTATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTcc > 1:4762494/1‑150 (MQ=255) tatTCAATATCGAGCACACTCGGTCCCCCCGCCCCGCGGGGGAGTGGGTTCGGGTGCGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCAt < 1:1663112/150‑1 (MQ=255) atTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGCGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATc < 1:347725/150‑1 (MQ=255) cAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGc > 1:1474689/1‑150 (MQ=255) cAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGc > 2:2990794/1‑150 (MQ=255) aaTATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGcc > 2:4214112/1‑150 (MQ=255) atatCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCa > 2:3052878/1‑150 (MQ=255) gAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCAt > 1:717820/1‑150 (MQ=255) gAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCAt > 1:2594510/1‑150 (MQ=255) gCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCa > 1:4091863/1‑150 (MQ=255) acaATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCaaa > 1:1833406/1‑150 (MQ=255) caATCGTTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAAc > 2:1478432/1‑150 (MQ=255) caATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAAc > 1:4530139/1‑150 (MQ=255) caATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAAc > 1:2131213/1‑150 (MQ=255) caATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAAc > 1:3205203/1‑150 (MQ=255) caATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAAc > 1:2522454/1‑150 (MQ=255) aTCGGTCCCCTCGCCCCTCTGGGGAGAGGTTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtg < 2:1298629/150‑1 (MQ=255) tCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtgg > 1:4789220/1‑150 (MQ=255) cGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggt > 2:2687489/1‑150 (MQ=255) ggTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTCACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggtg > 2:2621155/1‑150 (MQ=255) ggTCCCCGCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggtg < 1:1016184/150‑1 (MQ=255) gTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggtgg < 2:3671320/150‑1 (MQ=255) gTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggtgg < 1:4304208/150‑1 (MQ=255) tCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGc > 2:452517/1‑150 (MQ=255) ccccTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCt > 1:3693036/1‑150 (MQ=255) ccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGa > 1:229654/1‑150 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGat > 2:2964962/1‑150 (MQ=255) cccTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATggg < 1:3262949/150‑1 (MQ=255) ccTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGt > 2:2237625/1‑150 (MQ=255) tctGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACAGTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCCAACCCTGACGGTAGTGCGTTTTCCCTCAGCCACGCATCAAACTGGTGGCTGATATGGGTCa < 2:4376919/150‑1 (MQ=255) tctGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACAGTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCa < 2:1606561/150‑1 (MQ=255) ctGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAg > 1:3352459/1‑150 (MQ=255) gggAGAGGGTTAGGGTTAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAAt < 1:1418266/150‑1 (MQ=255) gggAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAAt > 2:2945918/1‑150 (MQ=255) ggAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATc < 2:215408/150‑1 (MQ=255) ggAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATc < 2:2493507/150‑1 (MQ=255) ggAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATc > 2:2853511/1‑150 (MQ=255) tttagGGTTAGGTGGTGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTACATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTTCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCa < 1:1308223/147‑1 (MQ=255) gagGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCAcc < 2:3797532/150‑1 (MQ=255) aGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCg > 2:14951/1‑150 (MQ=255) gggTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCGa < 2:2207088/150‑1 (MQ=255) tGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCGAGCg < 1:2245264/150‑1 (MQ=255) tGAGGGGGCCAGCGCGCACAGTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCGAGCg < 1:3537229/150‑1 (MQ=255) | AGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAAT‑GGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCGCGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGATATGGGTCAGAATCACCCGTGGCGAGCGG > CP009273/4303983‑4304281 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |