| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,859,011 | C→G | 7.2% | intergenic (+20/+28) | yeaD → / ← yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,859,011 | 0 | C | G | 7.2% | 595.2 / 5.0 | 196 | intergenic (+20/+28) | yeaD/yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (97/83); new base G (14/2); total (111/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.80e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
GGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCAA > CP009273/1858863‑1859157 | cGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCg > 1:795817/1‑149 (MQ=255) gATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCgg < 1:1597009/149‑1 (MQ=255) atatGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCggg > 2:2199039/1‑149 (MQ=255) tGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑Gc < 2:324812/149‑1 (MQ=255) tGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑Gc > 2:2726787/1‑149 (MQ=255) ccGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCaa < 2:811053/149‑1 (MQ=255) ccGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCaa < 2:590946/149‑1 (MQ=255) ggATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTCATTTACGGTAATGTTGTGTGCCGGGT‑GCACTg > 2:2147765/1‑149 (MQ=255) ggATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATg < 2:526803/149‑1 (MQ=255) atgatgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCa < 1:3518979/149‑1 (MQ=255) atgatgGCTACAAAACATGTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCa < 1:3519781/149‑1 (MQ=255) gatgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGGGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATc > 2:2996015/1‑149 (MQ=255) atgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATcc < 2:3047947/149‑1 (MQ=255) atgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATcc < 2:1578013/149‑1 (MQ=255) atgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGG‑GCAATGCATcc > 1:2999562/1‑149 (MQ=255) tgGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCg > 1:547177/1‑149 (MQ=255) gCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGc > 2:2083326/1‑149 (MQ=255) gCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGc < 2:3326001/149‑1 (MQ=255) aCAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGcaca > 2:3114265/1‑149 (MQ=255) aCAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGcaca > 2:1863871/1‑149 (MQ=255) aTTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATTCATCCGGCACACAA‑CAta > 1:1660562/1‑148 (MQ=255) aTTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCAACCGGCCCacaa‑caac > 1:160822/1‑147 (MQ=255) aTTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAATCATACGGCACACAA‑CAta > 2:1303177/1‑148 (MQ=255) tttgtttgTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTTCCGGGT‑GCAAATGATACCGCACacaaaaaaa > 1:1149359/1‑144 (MQ=255) tttgtttgTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGTGGCAAT‑CATACGGCCCacaa‑caaca > 1:3970595/1‑149 (MQ=255) tttgtttgTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGAATCCGGCCCACAA‑CATca > 1:2104655/1‑149 (MQ=255) gtgtAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGG‑GCGATGCATCCGGCACACAA‑CAACACACCaac > 1:3635742/1‑147 (MQ=255) tataaaGGGCTTACGATTACGAAACTCAAAATGTCACAAAAGATAAACCTCCAAATCTGGCCAAATCATTGCGGTTTGCTAAACTTTATTTTACTTTATTGTTGTGTGCGGGTT‑GAAATGAATCGGGCACACAA‑CATCACACCATATcc < 2:1196232/146‑1 (MQ=255) gAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCCATGCCTCCGGCCCACAA‑CAACACCCCCAATCCAg > 1:3116630/1‑149 (MQ=255) gAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAg > 2:4038474/1‑149 (MQ=255) ggCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAAGCATCCGGCACACAA‑CATCACACCAAATCCAGCGCAg > 1:3701380/1‑149 (MQ=255) gCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCAAATCCAGCGCAGt > 1:4517896/1‑149 (MQ=255) gCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATGCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGt < 2:2930382/149‑1 (MQ=255) tttctgattCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACCCAA‑CATCACCCCATATCCACCGCCGtt > 1:2738326/8‑149 (MQ=255) cTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGtt > 2:74061/1‑149 (MQ=255) ttACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCCAATCCAGCGCAGttt > 2:2876803/1‑149 (MQ=255) aCGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCCGCGCAGttttt > 2:275264/1‑149 (MQ=255) aCGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGttttt > 2:2974578/1‑149 (MQ=255) gCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGTACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGG‑GCAAGGCATACGGCCCACAA‑CATCACACCAAATACAGCGCCGtttttac > 1:2891765/1‑147 (MQ=255) gCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAAGCATACGGCACACAA‑CAACACACCAAATCCCGCGCACtttttac > 1:2950126/1‑147 (MQ=255) ttCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAATCATCCGGCCCAACA‑CATCACACCAAATCCAGCGCAGTTTTTACtt > 1:4396299/1‑149 (MQ=255) cAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCCATGCAACCCGCACCCAA‑CAACACACCAAATCCCGCGCCGTTTTTCCgttt > 1:1418305/1‑149 (MQ=255) aGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCCGCGCAGTTTTTCCTTTTg > 2:575491/1‑149 (MQ=255) gAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGT‑GCAATTCAAACGGCACACAA‑CAACACACCAAATACAGCGCAGTTTTTCCTTTTgg > 1:2032183/1‑149 (MQ=255) gAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGAATCCGGCACACAA‑CATCACACCAAATCCAGCGCAGTTTTTACTTTTgg > 1:229949/1‑149 (MQ=255) gCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAAGCATACGGCACACAA‑CAACACACCAAATCCAGCGCAGTTTTTGCTTTTGGTGCCg > 1:1758093/1‑149 (MQ=255) cAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCgg < 2:1407230/149‑1 (MQ=255) aaaaGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCCGTTTTTCCTTTTGGTGCCggct > 2:4323751/1‑147 (MQ=255) aaaGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CCTCACACCATATCCCGCGCAGTTTTTCCGTTTGGTGCCGGata > 2:2048038/1‑149 (MQ=255) aCCAAACACACACCTCCACATCGGGCGCAACCAATGCGCGTTGCCAACCTTTATTTTCGGTTATTGTTGGGTGCGGGGT‑CCAAGCCACCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCtt < 1:1269195/149‑1 (MQ=255) ccAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTa > 2:1471746/1‑149 (MQ=255) cAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCCGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTAt > 2:4533599/1‑149 (MQ=255) cAAAGAGAAACCTGCACATCGGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTAt < 2:1062649/149‑1 (MQ=255) aaGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCAAATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATcc > 2:1772976/1‑149 (MQ=255) gaAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCa < 2:2104862/149‑1 (MQ=255) aaaCCTGCACATCTGGCGCAAACAATTCGCGTTGCGAAACGTAAATTTACGTTATTGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCAt < 1:2255787/149‑1 (MQ=255) aaCCTGCACATCTGGCGCAATCCATTCGGGTTGCGAAACGTTAATTTACGTTAATGTTGTGGGCCGGGT‑GCATTGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATa < 2:1682267/149‑1 (MQ=255) aaCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATa < 2:3990147/149‑1 (MQ=255) aCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GGCATGGAACCGGGCCAAAA‑CATAACACCCAATACCGCGCAGTTTTTGGGTTTTGTGCCGGGTGTTACTTATACAGccaat > 1:3209796/1‑145 (MQ=255) aCCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTACTTTTGGTGCCGGATATGCCTTATCCAGCATAg > 2:3048825/1‑149 (MQ=255) ccTGCACATCTGGCGCAATCCATTCGCGTTGCTAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGc < 2:575682/149‑1 (MQ=255) cTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGGTATGCCTTATCCCGCATAGCt > 2:3425533/1‑149 (MQ=255) acaTCTTGGGAAATCCATTCGGGTGGCTAAACTTTAATTTACGTTATTGTTGTGTGCCGGTT‑GCAATGCATCCGGAACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAtt < 1:4569716/149‑1 (MQ=255) acaTCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAtt > 2:4543667/1‑149 (MQ=255) aaatgtGGCGAAACCCTTTCGGGTGTCTAAACTTTAATTTACGTTTTTTTTGTGTGCGGGGT‑CAAATCAATCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAAtt < 1:1988404/144‑1 (MQ=255) caTCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAAGGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTc < 2:4134184/149‑1 (MQ=255) caTCTGGCGCAAGCGATGCGGGTTGCGAAACTTTAATTTCCTTTATTTTTGTGTGCGGGGT‑GCATTGCAGCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTc < 1:4443631/149‑1 (MQ=255) tCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGG‑GCAATGCATACGGCACACCA‑CAACACACCAAATACAGCGCAGTTTTTCGGTTTGGTGCCGGCTATGCCATTTCCAGCATAGCAAATTCCg > 1:3365385/1‑149 (MQ=255) tGGCGCAATCCATTCGCGTTGCTAAACGTTAATTTACTTTAATGTTGTGTGCCGGGT‑GCAATGCACCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCt < 1:3814033/149‑1 (MQ=255) gcAATCCTTTCGGTTTGCTAACCTTTATTTTCCTTTTTTTTTGGGTGCGGGTT‑GAATTGACGCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaag < 1:1005407/149‑1 (MQ=255) gcAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaag > 2:1837909/1‑149 (MQ=255) gcAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCGTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaag > 2:3648415/1‑149 (MQ=255) aaccctttCGCGTTGCTAAACTTTAATTTAGTTTAAGTTTTTGTGCGGGGT‑GAATCCCATCCGCAACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaagaa < 1:4053078/143‑1 (MQ=255) aaTCCATTCGCGTTGCGAAACGATAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTgaagaa < 2:677213/149‑1 (MQ=255) aTCCATTCGCGTTGCGAAACGTTAATTTACTTTAATGTTGTGTGCCGGGT‑GAAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGaaa < 2:2341845/149‑1 (MQ=255) cagtCGCGTTCCTAAACTTTATTTTACTTTATTGTTTTGTGCCGGGT‑GCAATGCACCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGtt < 1:3782280/146‑1 (MQ=255) aTTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGGCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATACAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCCTAGCTAATTCCGCTGAAGAAAGtta > 2:1937306/1‑148 (MQ=255) aTTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATTCATCCGGCACACAA‑CATCACACCAAATACAGCGCCGTTTTTACGTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCAGAAGAAAGTTc > 2:1599216/1‑149 (MQ=255) gcgTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATACGGCACACAA‑CAAAACACCAAATACAGCGCAGTTTTTCCTTTTGGTTCCGGATATTCCTTATACAGCATATCTAATTCCGCGGAAGAAAGTTCGAcc > 1:1096125/1‑149 (MQ=255) gtttGCTAAACTTTATTTTCTTTTATTGTTGTGTGCGGGGT‑GAAATGCCTCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCt < 1:2083326/147‑1 (MQ=255) gTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTc > 2:3702452/1‑149 (MQ=255) aaaCGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCCGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGcac > 2:2570487/1‑149 (MQ=255) aaCGTTATTTTACGTTATTGTGGTGTGCGGGGT‑GCAATGCACCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGcaca < 2:1165369/149‑1 (MQ=255) aaCGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACCCAA‑CAGCACACCAAATCCCGCGCCGTTTTTCCGGTTGGTGCCGGATATGCCTTTTCCCGCATAGCTAATTCCGCTGTAGAAAGTTCGTCCTCAAGcaca > 2:3196697/1‑149 (MQ=255) aCGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAg < 2:2852571/149‑1 (MQ=255) aCGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCAAATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATACAGCATAGCTAATTCCGCTGAAGAAAGTTCGCCCTCAAGCACAg > 2:3807522/1‑149 (MQ=255) ggTTATTTTACGTTATTGTTGTGTGCGGGGT‑GAATTGAATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGc < 1:1462233/148‑1 (MQ=255) ttAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCg < 2:2380377/149‑1 (MQ=255) tttACGTTAATGTTGTGTGGCGGGT‑GCAAATCAAACCGCACACAA‑CAACACAACATATCCAGCGCAGTTTTTTCGTTTGGTGCCGGATATTCCGTATCCAGCATATCTAATTACGCTGAAGAAATTTCGACCTCAAACACAGCCCCaat > 2:465375/1‑147 (MQ=255) tttgttgtGTGCGGGTT‑CCACCGCCCCCGCCCCACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGa < 1:4210464/147‑1 (MQ=255) tttgttgtGTGCGGGGT‑GCAATGCATCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGa < 1:4368207/147‑1 (MQ=255) aaTGTTGTGTGCCCGGT‑GCAAATCATACGGCACACAACCAACA‑ACCATAACCAGCGCAGTTTTTCCGGTGTGTGCCGGATATGCCTTATCCACCATAGCTAATTACCCTGCAGAAACTTCGGACACAAGCACATCCGCCTTTTGTTggc > 2:892161/1‑148 (MQ=255) ttgtGGGCGGGGT‑TAAAGGCACCCGCCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATg < 1:4279903/149‑1 (MQ=255) tgtgtgCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATgg < 2:4499649/149‑1 (MQ=255) tgtgtgCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATgg > 2:3744939/1‑149 (MQ=255) gtgggCCGGGT‑GCAATGCAGCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATggg < 2:542099/149‑1 (MQ=255) tgCGGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCaa < 1:750545/149‑1 (MQ=255) tgCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCaa < 2:3566491/149‑1 (MQ=255) tgCCGGGT‑GCAATGAATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCaa < 1:1050095/149‑1 (MQ=255) ggCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCaa < 1:3037760/148‑1 (MQ=255) | GGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAATTTACGTTAATGTTGTGTGCCGGGT‑GCAATGCATCCGGCACACAA‑CATCACACCATATCCAGCGCAGTTTTTCCTTTTGGTGCCGGATATGCCTTATCCAGCATAGCTAATTCCGCTGAAGAAAGTTCGACCTCAAGCACAGCCGCATTTTGTTGGACATGGGCAA > CP009273/1858863‑1859157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |