| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,080,674 | G→T | 8.1% | intergenic (‑79/+136) | yoeI ← / ← yeeY | uncharacterized protein/LysR family putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,080,674 | 0 | G | T | 8.1% | 739.6 / 5.5 | 251 | intergenic (‑79/+136) | yoeI/yeeY | uncharacterized protein/LysR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (125/89); new base T (3/34); total (128/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 263 total aligned reads displayed.
AGTAACGTTATGCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGAT > CP009273/2080526‑2080822 | aGTAACGTTATGCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTatg > 1:670344/1‑149 (MQ=255) cGTTATGCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTatgaatga < 2:3651632/149‑1 (MQ=255) aTGCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCGTGGTATGAATGATTgg > 1:980483/1‑149 (MQ=255) gCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGtt < 1:2573434/149‑1 (MQ=255) gCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGAGTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGtt < 2:221500/149‑1 (MQ=255) gACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCGTGGTATGAATGATTGGTTTg > 1:4263238/1‑149 (MQ=255) aCATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGa > 2:3179830/1‑149 (MQ=255) aCATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGa > 2:884121/1‑149 (MQ=255) aTGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAg < 2:4276317/149‑1 (MQ=255) tGGTCATTCTCCTTGACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGc < 2:3180077/149‑1 (MQ=255) tctcCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGCATGATTGGTTTGAAGCAAAAAAt > 1:1233010/1‑149 (MQ=255) ccTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAAc < 1:822553/149‑1 (MQ=255) ccTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAAc < 1:2039758/149‑1 (MQ=255) cTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAAcc < 2:4243371/149‑1 (MQ=255) ttACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGa < 1:3442590/149‑1 (MQ=255) ttACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGa < 1:3538596/149‑1 (MQ=255) tACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGAc > 2:3355083/1‑149 (MQ=255) aCGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACg > 2:3448499/1‑149 (MQ=255) cGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGCAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGc > 1:3127095/1‑149 (MQ=255) gtttaTAACCGTCGCTTAAGAAAAAAATTGCCCAATTTTTTTGGATTCCTCAGCGAAAAAAAATGTCTTTTTTTTTTAAATATCTATCCGGTACTAAGCCCGGCCTCTTGGTATTATTGATTTTTTTTAAGAAAAAAATAACCGACGCt < 2:1406176/145‑1 (MQ=255) ggTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCt > 2:1488469/1‑149 (MQ=255) tGATAACGGTCGCGTCAGCAAAAATTTGCCCCATTTTTTTGGTTTCCTCCGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTAGGAAGCCCGGCCTCTTGGTATTATTGATTGGTTTGAAGCAAAAAATAACCGACGCtga < 2:2432998/149‑1 (MQ=255) taTAACCTTCGCGTAAGAAAAAATTTGCCCATTTTTTTTGTATTCCTCAGCTAAAAAAACTGTCTATTTTTATTAAATATATATCCGGAACGAAGCCCGGCCTCTTGGTATGAATGATTGTTTTGAAGAAAAAAATAACCGACGCtgat < 2:274459/148‑1 (MQ=255) gATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCGTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCtgat > 1:1220340/1‑149 (MQ=255) gATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCGCTTGGTATGTATGTTTGGTTTGAAGCAAAAAATAACCGACGCtgat > 1:3157511/1‑149 (MQ=255) aCCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGaaa < 2:323959/149‑1 (MQ=255) ccGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAAc > 1:295252/1‑149 (MQ=255) gTCGCGAAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGt > 2:376331/1‑149 (MQ=255) tCGCTTAACAAAAAAATTGCCCCTTTTTTTTGTATTCCTCAGCGACAACAACTGTCTATTTTTATTAAATATCTATCCGGTACTACGCCGGGCCTTTTGTTTTTATTTATTGTTTTTAACAAAAAAATAACCGACGCTGATGAAACGTc < 1:2323160/149‑1 (MQ=255) ctaaaccAAAAAATTCCCCCATTTTTTTGTATTCCTCAGCTAAAACAACTGACTATTTTTAGTAAATATATATCCGGTACGAAGCCCGGCCTCTTGTTATTAATGATTGGTTTTAAGCAAAAAATAACCGACGCTGATGAAACGTCGGt < 2:4091754/143‑1 (MQ=255) gTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGtt > 1:4347205/1‑149 (MQ=255) tAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGttt > 1:1547947/1‑149 (MQ=255) aaGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGtttt > 1:1641439/1‑149 (MQ=255) agaaaaaaaTTGCCCAATTTTTTTGGATTCCTCAGCGACAACAACTGTCTATTTTTATTAAATATCTATCCGTTACGAAGCCCGGCCTCTTGTTATTAATTATTGGTTTTAAGCAAAAAATAACCGACGCTGATGAAACGTCGGttttt < 1:4079174/146‑1 (MQ=255) gaaaaaaaTTGCCCCATTTTTTTGGATTCCACAGCGACAACACCTGCCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCACTGGGTATTAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTa < 2:2000869/147‑1 (MQ=255) gCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGACGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTa < 2:4552249/149‑1 (MQ=255) gCAAAAAATTGCCCCATTTTTTTGGATTCCACAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTa < 2:1402086/149‑1 (MQ=255) cAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAg < 2:1112301/149‑1 (MQ=255) aaaTTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCAt > 1:3570016/1‑149 (MQ=255) aaaTTGCCCAATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATTAATGTTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCAt < 1:2666770/149‑1 (MQ=255) aaTTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGAACGAAGCCCGGCCTCTTGGTATGAATGAGTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCAtt > 2:3391198/1‑149 (MQ=255) aTTGCCCAATTTTTTTGTATTCCTCAGCGACAACAACTTTCTATTTTTAGTAAATATCTATCCGGTACGACGCCCGGCCTCTTGGTATGAATGATTGTTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCAttt < 2:1168077/149‑1 (MQ=255) ccttttttttGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATTAATGTTTGTTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc < 1:3776829/146‑1 (MQ=255) ccATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATTAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATTAAACGTCGGTTTTTAGTAATTTTTTGAc > 1:4509426/1‑149 (MQ=255) ccATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTTAAGCAAAAAATAAACGACGCTGATGAAACGTCGGTTTTTAGTAAtttttttta > 1:3110691/1‑146 (MQ=255) ccATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGAc > 1:4406437/1‑149 (MQ=255) cATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCGTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACa > 2:2391366/1‑149 (MQ=255) ttttttGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGACGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAgcg < 2:1853074/149‑1 (MQ=255) gATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCAtt > 2:2020217/1‑149 (MQ=255) aTTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATtg > 1:1014830/1‑149 (MQ=255) ttCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTATTAATTTTTTTTCATCGGCGCATtgt > 1:816597/1‑149 (MQ=255) ccTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGc > 2:2263103/1‑149 (MQ=255) cAGCTAAAAAAACTGTCGATTTTTATTAAATTTCTATCCGGTACGAAGCCCGGCCTCTTGTTTTTATTTTTTGTTTTGAAGAAAAAAAAAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTa < 1:1280790/149‑1 (MQ=255) cAGCGACAACAACTGTCGATTTTTTGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTa < 2:933244/149‑1 (MQ=255) aGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCCTTGTGCCTaa > 1:1875775/1‑149 (MQ=255) gACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATg > 1:198102/1‑149 (MQ=255) acaacaTGTGTCTTTTTTTATTAAATATCTATCCGGTACGAAGCCGGGCCTCTTGGTTTGATTGTTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATgg < 2:839936/149‑1 (MQ=255) acaacaACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATgg > 2:714110/1‑149 (MQ=255) acaacTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATggggg > 2:235282/1‑149 (MQ=255) acaacTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATggggg > 2:1365216/1‑149 (MQ=255) aacTTTCTATTTTTTTTAAATATCTATCCGTTACGAAGCCGGGCCTGTTGTTATGTTTTTTTGTTTTTAACAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATggggggg < 1:2698568/149‑1 (MQ=255) aacTGTCTATTTTTAGTAAATACCTATCCGGTACGACGCCCGGCCTCTTGGTTTGAATGATTGGTTTGATGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATggggggg < 1:324249/149‑1 (MQ=255) aacTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGTTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATggggggg < 1:1120360/149‑1 (MQ=255) acTGTCGATTTTTAGTAAATATCTATCCGGTAAGAAGCCCGGCCTCTTGGTATTAATTATTGGTTTGAATCAAAAAAAAACCGACGCTGATGAAACGTCGGTTTTTAGTGATTTTTTGAAAGCGGCGCATTGTGGCTAAATGGGGGGGa > 1:502330/1‑149 (MQ=255) tcgcGATTTTTAGAAAATAGCTATCCGGTACGAAGCCCGGCCACTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGaaa < 2:2984991/146‑1 (MQ=255) tGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGaaa < 2:2871131/149‑1 (MQ=255) gTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAAt > 2:54344/1‑149 (MQ=255) gATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGAc > 2:307667/1‑149 (MQ=255) tttttAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACaa < 1:4537341/149‑1 (MQ=255) aGTAAATATCTATCCGGGACGACGCCCGGCCTCTTGGTATGACTGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGaa < 2:4456693/149‑1 (MQ=255) gTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGTTATGATTTATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAAt < 1:584402/149‑1 (MQ=255) gTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAAt < 2:1641439/149‑1 (MQ=255) gTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAAt < 2:4145511/149‑1 (MQ=255) gTAAATATCTAGCCGGTACGAAGCCCGGCCTCTTGTTATGAATTATTGGTTTTAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAAt < 2:3443942/149‑1 (MQ=255) aattatctatcCGGTACGAAGCCCGGCCTCTTGGTATTAATGATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATga < 1:2503167/146‑1 (MQ=255) atatCTATCCGGTACGAAGCCCGGCCTCTTGGTATGATTGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATgaga < 2:1828710/149‑1 (MQ=255) atctatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAgg > 2:1215285/1‑149 (MQ=255) atctatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAgg > 2:2086123/1‑149 (MQ=255) tctatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGc < 2:3625775/149‑1 (MQ=255) ctatcCGGTACGAAGCCCGGCCTCTTTGTATTAATGATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCt < 2:186805/149‑1 (MQ=255) tatcCGGTACGACGCCCGGCCTCTTGGTATTAATGTTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCtt < 2:58670/149‑1 (MQ=255) tatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCtt < 2:4057234/149‑1 (MQ=255) tatcCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCtt > 2:302078/1‑149 (MQ=255) agccGTTACGACGCCGGGCATTTTGTTTTTAATTTTTGTTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTg < 1:4231152/147‑1 (MQ=255) ccGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGTTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTc < 1:1493247/149‑1 (MQ=255) gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGa > 1:1057017/1‑149 (MQ=255) gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGa > 2:2775264/1‑149 (MQ=255) gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGa > 1:725657/1‑149 (MQ=255) gTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGa > 2:2249141/1‑149 (MQ=255) tACGAAGCCCGGCCTCTTGTTATGAATGTTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGaa < 1:3703466/149‑1 (MQ=255) tACGAAGCCCGGCATCTTGTTTTGTTTTTTTGTTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGaa < 1:1375187/149‑1 (MQ=255) aCGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGaat > 2:4451706/1‑149 (MQ=255) ggCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCt > 2:3424020/1‑149 (MQ=255) gcccactTGGAAAGAATGATTGGTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCt < 2:2538466/144‑1 (MQ=255) ctctTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTa > 1:2928622/1‑149 (MQ=255) gttATGATTGTTTGTTTTGAAGCAAAAAATACCCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATgg < 1:1571970/147‑1 (MQ=255) gTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTaatttgc > 2:1708924/1‑144 (MQ=255) gTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTATTTAAATTGc > 1:2431144/1‑149 (MQ=255) tgaattaTTGTTTTGAAGAAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGa < 1:2843081/149‑1 (MQ=255) tgaatgaTTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGa > 1:3949346/1‑149 (MQ=255) | AGTAACGTTATGCGACATGGTCATTCTCCTTTACGGTGATAACCGTCGCGTAAGCAAAAAATTGCCCCATTTTTTTGGATTCCTCAGCGACAACAACTGTCGATTTTTAGTAAATATCTATCCGGTACGAAGCCCGGCCTCTTGGTATGAATGATTGGTTTGAAGCAAAAAATAACCGACGCTGATGAAACGTCGGTTTTTAGTCATTTTTTGACAGCGGCGCATTGTGCCTAAATGGGGGGGAAATGACAAGAGAATGAGAGGCTTGTCAGAATAATTTTTCTTTAAATGGCTGAT > CP009273/2080526‑2080822 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |