BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,822,339	A→C	7.2%	Q12P (CAA→CCA) ‡	xanP →	xanthine permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,822,339	0	A	C	7.2%	651.2 / 9.0	253	Q12P (CAA→CCA) ‡	xanP	xanthine permease
Reads supporting (aligned to +/- strand): ref base A (133/92); new base C (18/7); total (152/101)
Fisher's exact test for biased strand distribution p-value = 2.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 254 total aligned reads displayed.

ATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGC  >  CP009273/3822193‑3822483

ataAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAc                                                                                                                                                  <  2:2206971/149‑1 (MQ=255)

  aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAc‑cc                                                                                                                                               >  1:4027183/1‑148 (MQ=255)

  aaaaaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑Cg                                                                                                                                               >  1:2658652/1‑149 (MQ=255)

     aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGtt                                                                                                                                            <  1:3746139/149‑1 (MQ=255)

       aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑gc                                                                                                                                         <  1:203163/149‑1 (MQ=255)

             tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CGGTT‑GCGCAGAc                                                                                                                                   >  2:2865653/1‑149 (MQ=255)

             tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGAc                                                                                                                                   >  2:1492368/1‑149 (MQ=255)

             tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGAc                                                                                                                                   >  2:321283/1‑149 (MQ=255)

             tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGAc                                                                                                                                   >  2:3018334/1‑149 (MQ=255)

             attATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGAc                                                                                                                                   <  2:3333761/148‑1 (MQ=255)

               tATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CACAT‑GCGCAGaaac                                                                                                                                 >  1:1553921/1‑146 (MQ=255)

                 tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATTCGCAAA‑CCGTT‑GCGCAGACTCaa                                                                                                                               >  1:1944485/1‑149 (MQ=255)

                 tctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CCGTT‑GCGCACACACaa                                                                                                                               >  1:288550/1‑149 (MQ=255)

                  ctcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGACAATTCGCCAC‑CGGGT‑TCGCCCACACaaa                                                                                                                              >  2:4214844/1‑149 (MQ=255)

                   tcATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CCGTT‑GCGCAGACTCaaaa                                                                                                                             >  2:4590557/1‑149 (MQ=255)

                    cATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGACTGTTTCCACCCTCGAGACAGAAAATGCGCAAC‑ACGTA‑GAGCAAACACaaaaa                                                                                                                            >  1:1066320/1‑148 (MQ=255)

                     aTTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGGCAC‑CCGTT‑TGGCAGACCAAAAACa                                                                                                                           >  1:3551278/1‑149 (MQ=255)

                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACat                                                                                                                          >  2:805111/1‑148 (MQ=255)

                      tttAAATATTTAGATGAGGATGTGGCAAACGTTTGATTTTCGCTATCGGTCAGCTAAAATGCCCGCTTTGCTACAACGGGTTTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAg                                                                                                                          <  2:2121238/149‑1 (MQ=255)

                       ttAAATATTTAGATGTGGATGTGTCAAACTTTTGCTTTTCTCTTTCGGTCAGCTCAAATGCCCGCTTTGCTACCAGGGTTTTGTTTTCTATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCACC‑CGGTT‑GCGCAGACTCAAAACAGc                                                                                                                         <  2:56087/149‑1 (MQ=255)

                       ttAAATATTTAGATGAGGTTGTGGCAACCGTTTGCTTTGCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGAGGTCTGTTACCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGc                                                                                                                         <  2:1153125/149‑1 (MQ=255)

                       ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCTGTCAGCTAAAATGCCCGCTTTGCTAACACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCCA‑CCGTA‑GCGCAGACTACAAACAGc                                                                                                                         >  2:3964229/1‑149 (MQ=255)

                          attatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTGGCTACCAGGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGaa                                                                                                                      <  2:4443567/147‑1 (MQ=255)

                            tatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CCGTT‑GCGCAGAAAAAAAAAACCGAAca                                                                                                                    >  1:937995/1‑148 (MQ=255)

                            tatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACt                                                                                                                    <  2:3683412/149‑1 (MQ=255)

                                 aGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACA‑CAGTT‑GCGCACACACAAAAAAACCAACAGAttt                                                                                                               >  1:2376915/1‑149 (MQ=255)

                                  gATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CCGTT‑GCGCAGACACAAAAAAACCAACAGAtttt                                                                                                              >  1:4408319/1‑148 (MQ=255)

                                  gATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CCGGT‑GCGCAGACTAAAAACAACGACCAGATTTa                                                                                                              >  1:3119633/1‑149 (MQ=255)

                                    tGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTAcc                                                                                                            >  2:4160611/1‑149 (MQ=255)

                                      aGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGGCCC‑CGGGT‑GCGCAGACTCAAAACAGCGAACTGAttttacgt                                                                                                          >  1:3906347/1‑144 (MQ=255)

                                       ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAAAAGCGAACTGATTTACCGTc                                                                                                         >  2:522861/1‑149 (MQ=255)

                                        gATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGATTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCt                                                                                                        >  2:1440005/1‑149 (MQ=255)

                                         ttgtgGAAATGGTTTGGTTTTGTCTTGCGGTCAGCTACAATGCCCGGTTTGCTACCTGGGGTTTGTTTTCGATGTCTGTTTCCCCCCTGGTGTCTGAATTGGCGCTAG‑GGGTT‑GGGCAGACTCAAAAGTGGGAACTGATTTACCGTCtt                                                                                                       <  2:2793765/148‑1 (MQ=255)

                                         aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGATAAAATGCCCGCTTTGCTACCACGGGTTTTTTTTCGTTTTCTGTTTCCACCCTCGAGTCAGAAATTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCtt                                                                                                       <  2:613991/149‑1 (MQ=255)

                                              gCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGGT‑GCGCAGACTCAAAACAGCGAACAGATTTACCGTCTTGAAGa                                                                                                  >  2:2705463/1‑149 (MQ=255)

                                                    gTTTGCTTTTCTCTTTCGGTCAGCAAAAAGGCCCGCTTTGCTACCAGGGGTTTGTTTTGTATGTCTGTTACCACCATCGAGTCATAAAATGCGCACC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTcc                                                                                            <  2:31792/149‑1 (MQ=255)

                                                     tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccg                                                                                           >  2:1049786/1‑149 (MQ=255)

                                                     tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATAGTccg                                                                                           >  2:4406487/1‑149 (MQ=255)

                                                     tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAAATGATTTAACGTCTTGAAGATCGTccg                                                                                           >  2:129050/1‑149 (MQ=255)

                                                     tttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACACAAAACACCGAACAGATTTACACTCTTTAATATAGTccg                                                                                           >  1:2384307/1‑149 (MQ=255)

                                                       tggttttCTCTTTCGGTCAGATAACCTGCCCGCTTTGCTACCTCGGTTTTGTTTTCGATGTCTGTGTCCCCCCTCGAGTCATAAAATGCGCACC‑GGGTT‑GCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccgcc                                                                                         <  1:2144999/146‑1 (MQ=255)

                                                          ttttCTCTGTCGGTCAGCTAAAAGGCCCGCTTGGCTACAACGGGTTTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCt                                                                                      <  2:3113792/149‑1 (MQ=255)

                                                           tttCTCTTCCGGTCAGATAAACGGCCCGCTTTGCAACCAGGGTTTGGTTTTGTCTGTCTTTTCCCACCCTCGTGTAATAAATGGCGC‑AC‑CGGTTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCtt                                                                                     <  1:1779779/149‑1 (MQ=255)

                                                            ttCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGAGCACCACGGTT‑‑CGCAGACACAAAACAGCGAACAGCTTTTAAGTATTGAAGATCGTCcgcagcata                                                                                    >  1:948898/1‑146 (MQ=255)

                                                              ctctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCt                                                                                  >  2:1442491/1‑149 (MQ=255)

                                                               tctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTAACGGCTTGAAGATCGTCCGCCGCTTccgc                                                                                 >  2:2317367/1‑147 (MQ=255)

                                                                     ggTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACGCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAccc                                                                           >  2:1485727/1‑149 (MQ=255)

                                                                      taaatcTAAATTGCCCGCTTTGATACCAGGGTTTTGTTTTCTTTGTTTTTTACCACCCTCTAGTAAGAAAAGGCCCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCt                                                                          <  1:4106590/144‑1 (MQ=255)

                                                                      gTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTGTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcccc                                                                          >  2:3698258/1‑148 (MQ=255)

                                                                       tCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                         <  2:3634311/149‑1 (MQ=255)

                                                                        cAGCTAAAATGCCCGCTTTGCTACCACGGTATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAATTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGt                                                                        <  2:4316326/149‑1 (MQ=255)

                                                                         agatAAAATGCCCGATTTGCAACCTGGTTTTTTTTTTCTTTTTCTGTTACCACCCTCTAGTCAGAAACTGCGCAAC‑GGGTG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGtt                                                                       <  1:1705458/146‑1 (MQ=255)

                                                                          gCTAAACGGCCCGCTTTGCTCCCACGGGATTGTTTTCGATTTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGttt                                                                      <  2:1718401/149‑1 (MQ=255)

                                                                          gCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CGGTT‑GCGCAGACGCAAAACAGCGAACTGATTTACCGGCTTGAAGATCGTCCGCCGCGTCCACAAACCCGGttt                                                                      >  1:2626564/1‑149 (MQ=255)

                                                                             aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgcc                                                                   >  2:3429840/1‑149 (MQ=255)

                                                                              aaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCGGTTTgccg                                                                  >  2:1590915/1‑149 (MQ=255)

                                                                                aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCACC‑CGGGT‑GCGCAGACACAAAACACCGAACAGATTTACCCGCTTGAAGATCGTCCGCCGCGTCCACAAACCCTGTTTggcgcc                                                                >  1:922914/1‑149 (MQ=255)

                                                                                aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGGTTgccgcc                                                                >  2:1699606/1‑149 (MQ=255)

                                                                                  gCCCGCTTTGCTACCACGGGTGTGTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                              <  2:699141/149‑1 (MQ=255)

                                                                                    ccGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CCGGG‑GCGCACACGCAAAACACCGAACAGATTTAACGGCTTGAAGATCGGCCGCCCCGTCCGCAAAACCAGGTTTCCGCCGGTc                                                            >  1:2791358/1‑149 (MQ=255)

                                                                                      gCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                          >  2:3402437/1‑149 (MQ=255)

                                                                                      gCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                          >  2:2215307/1‑149 (MQ=255)

                                                                                      gCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAg                                                          >  2:2934254/1‑149 (MQ=255)

                                                                                       cTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGc                                                         >  2:2940592/1‑149 (MQ=255)

                                                                                        tttGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAA‑CCGGT‑GCGCCGACACAAAAAAGCGAACAGATTTAACGGCTTTAAGAACATACGCCCCATACAAAAAACCAGATTTGCGCCAGTCAGCa                                                        >  1:3386974/1‑149 (MQ=255)

                                                                                                 ccGGGATGGTTGTCGAGGTCTGTTTCCACCCTCGCGTCAGAAACTGCGCCAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                               <  2:2708018/148‑1 (MQ=255)

                                                                                                 aCGGGTTTGTTTTCGATGTCTTTTTCCACCCTCGATTCATAAATGGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCGGGc                                               <  2:3614321/149‑1 (MQ=255)

                                                                                                 aCGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGc                                               >  2:1480262/1‑149 (MQ=255)

                                                                                                    ggAGTGTGTTCGAGGTCTGTTTCCACCCTCGAGGCAGACAATGCGCAAC‑CGGGG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                            <  2:2358464/149‑1 (MQ=255)

                                                                                                     gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGAAACAAAACAACGAAATGATTTACCGTCTTGAAGATAGTACGCCGCTTCCACAAAACCTGTTTTCCGCCAGGCAGCAACTGCTGGCGATg                                           >  1:4122184/1‑149 (MQ=255)

                                                                                                     gATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATg                                           <  2:3493774/149‑1 (MQ=255)

                                                                                                      aTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                          >  2:1369878/1‑149 (MQ=255)

                                                                                                          ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCAC‑CGGTT‑GCGCAGACTCAAAAAAGCGAACTGATTTAAAGTCTTGAATATCGTCCGCCGCTTCCTCAAACCCTGTTTTCCGCCGGTCAGCCTCTGCTGGCGATGTTCGt                                      >  2:1925582/1‑149 (MQ=255)

                                                                                                          ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCAGGCGAGGTTCGt                                      >  2:3526559/1‑149 (MQ=255)

                                                                                                               gATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTGCCTCAAACCCTGGTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCgg                                 >  2:4278000/1‑149 (MQ=255)

                                                                                                                 tgtctgtcCCCACCCCCGAGTCACAAAAGGCGCACC‑CGGTG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTg                               <  1:2493721/149‑1 (MQ=255)

                                                                                                                   tCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGAt                             <  2:1770474/149‑1 (MQ=255)

                                                                                                                   tCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACAGTCTTTAAGATAGTCCGCCGCTTCCTCAAACCCTGTTTGGCGCCTGTCAGCATCTGCTGGCGATTTTCGTTTCGGTGAt                             >  2:2323570/1‑149 (MQ=255)

                                                                                                                     tGTTTCCCCCCTCTAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCa                           <  2:2378351/149‑1 (MQ=255)

                                                                                                                     tGTTCCCACCCTCTATACATAAAAGGCCCAAC‑CGGTT‑GCGCATACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCa                           <  1:335079/149‑1 (MQ=255)

                                                                                                                      gTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCGGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                          >  2:876444/1‑149 (MQ=255)

                                                                                                                      gTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCTTCCTCAAAACCTGTTTGCCGCCAGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCAc                          >  2:2772280/1‑149 (MQ=255)

                                                                                                                       tttCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACg                         >  2:1769368/1‑149 (MQ=255)

                                                                                                                        ttCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGc                        >  2:3969728/1‑149 (MQ=255)

                                                                                                                         tCCACCCTCGCTTAATAATAGGCGCACC‑GGGTG‑CCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGcc                       <  1:1670689/149‑1 (MQ=255)

                                                                                                                         tCCACCCTCGAGTCAGAAAATGCGCACC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGcc                       >  2:581846/1‑149 (MQ=255)

                                                                                                                                tCGAGTCAGAAATGGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                <  2:288550/149‑1 (MQ=255)

                                                                                                                                tCGAGTCAGAAACTGCGCCCC‑CGGTG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                <  1:495948/149‑1 (MQ=255)

                                                                                                                                tCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                <  2:264939/149‑1 (MQ=255)

                                                                                                                                    gTCAGAAACGGCCCCCC‑CGGTC‑CCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTaa            <  1:1606847/149‑1 (MQ=255)

                                                                                                                                     tCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt           >  2:4082592/1‑149 (MQ=255)

                                                                                                                                      cataaacTGCGCACC‑GGGGT‑CCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATc          <  1:554422/146‑1 (MQ=255)

                                                                                                                                      cAGAAAAGGCGCACC‑CGGTG‑GCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATc          <  1:1323935/149‑1 (MQ=255)

                                                                                                                                       ataaaaTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGACAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCt         <  2:2419437/147‑1 (MQ=255)

                                                                                                                                         aaaaTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc       <  2:210301/149‑1 (MQ=255)

                                                                                                                                         aaaaTGCGCAAC‑CGGTG‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc       <  2:2441451/149‑1 (MQ=255)

                                                                                                                                          aaaTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCCGCGCTATTAATCTGcc      >  1:3662725/1‑149 (MQ=255)

                                                                                                                                          aaaTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTAGTTGCGGTGATCACGCCAGCGCTATTAATCTGcc      >  1:4294231/1‑149 (MQ=255)

                                                                                                                                           aaTGCGCACC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCa     <  2:772740/149‑1 (MQ=255)

                                                                                                                                            aTGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAg    >  1:3023172/1‑149 (MQ=255)

ATAAAAAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAAC‑CGGTT‑GCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGC  >  CP009273/3822193‑3822483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`