| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,468,993 | A→T | 6.0% | F121Y (TTC→TAC) | yjgM ← | putative acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,468,993 | 0 | A | T | 6.0% | 1048.4 / 3.4 | 308 | F121Y (TTC→TAC) | yjgM | putative acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (136/148); new base T (19/2); total (158/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.42e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 311 total aligned reads displayed.
ATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCACCGCCGCCGAC > CP009273/4468845‑4469141 | tttttAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAAc < 1:1923911/149‑1 (MQ=255) tttAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAAccc < 1:2347418/149‑1 (MQ=255) agTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCAtctc < 1:945454/149‑1 (MQ=255) gTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCAtctct > 2:4447110/1‑149 (MQ=255) gTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCAtctct < 2:2079785/149‑1 (MQ=255) gTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCAtctct > 2:323292/1‑149 (MQ=255) ttCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTGTCCAGATAGCAGCGTTTGAAACCCAtctctc > 2:1701399/1‑149 (MQ=255) cAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATATCAGCGTTTGTAACCCATCTCTCGCGcca > 2:2838417/1‑148 (MQ=255) aTCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTc < 1:547110/149‑1 (MQ=255) tCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTcc < 2:1549827/149‑1 (MQ=255) gCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATc > 2:651956/1‑149 (MQ=255) gCAATTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATc < 1:3633592/149‑1 (MQ=255) cACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCg > 2:2412690/1‑149 (MQ=255) cTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGcc > 1:3036930/1‑149 (MQ=255) tCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTGTCCAGATAGCCGCGGTTGTAACCCATCTCTAGCGCCTGCTCCATCGCCag > 1:4407123/1‑148 (MQ=255) acaATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCACTCGCGCCTGCTCCAAAGCCATTa > 2:1752367/1‑149 (MQ=255) acaATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTGTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTa > 2:1922665/1‑149 (MQ=255) caATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTaa < 1:929861/149‑1 (MQ=255) aaTCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGTAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAg > 1:1515729/1‑149 (MQ=255) aTCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAgg < 1:2806442/149‑1 (MQ=255) aTCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAgg > 1:614952/1‑149 (MQ=255) aTCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTGTGCAGATAGCAGCGTTTGTAACCCCACTCTCGCGCCGGCTCCCACGcccagaagg > 1:4211497/1‑142 (MQ=255) cGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGcc < 1:215484/149‑1 (MQ=255) cGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCAACGCCATTAAGGcc > 2:3785584/1‑149 (MQ=255) gACGTGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCa < 1:1304130/149‑1 (MQ=255) aCATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAg < 2:231688/149‑1 (MQ=255) aCATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGGTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAg > 2:1101312/1‑149 (MQ=255) aCATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTGTCCAGATATCAGCGTTTGGAAACCAACTCAAGCGCCGGCTCCAACGCCCATAAGGcccg > 1:4339547/1‑147 (MQ=255) cATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGt < 1:4169386/149‑1 (MQ=255) cccGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGtttttt < 1:3376321/149‑1 (MQ=255) cccGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGtttttt < 1:4077097/149‑1 (MQ=255) cccGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGtttttt < 2:3704825/149‑1 (MQ=255) gTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGGTTGTAACCCATCTCTCGCGCCTGCTCCCTCGCCAGTAAGGCCAGttttttttc > 1:3289701/1‑147 (MQ=255) ccAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGccc < 2:4221307/149‑1 (MQ=255) cAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCt < 2:3731622/149‑1 (MQ=255) cAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCAACTCTCGCGCCTGCTCCATCGCCCTTAAGGCCAGTTTTTTTTCCAGCCCt > 2:2348818/1‑149 (MQ=255) cAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGGTTGAAACCCATCTCACGCGCCAGCGCCAACGCCCTTAAGGCCAGTTTTTTTTCCAGccca > 1:4394189/1‑148 (MQ=255) aaGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCtt < 1:653418/149‑1 (MQ=255) aGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCttt < 2:3090463/149‑1 (MQ=255) aGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTACAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCttt > 2:449440/1‑149 (MQ=255) gcgcATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATATCAGCGTTTGTAACCCAAATCTAGCGCCAGCTCCAACGCCATTAAGGCCAGTTTTTTTTCCAGCCCtttt > 1:3562024/1‑148 (MQ=255) gcATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCTTTTACACATATCAGCGTTTTAAACCCAAATCTCGCGCCTTCACCATAGCCAAAAAGTCCAGTTTTTTTGCCAGCCCTTTGcc > 1:3413654/1‑149 (MQ=255) gTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGa < 2:431152/149‑1 (MQ=255) gTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGa < 2:2163029/149‑1 (MQ=255) gTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGa < 2:3871264/149‑1 (MQ=255) gTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGa < 2:2525106/149‑1 (MQ=255) tCGATATGCTCACAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGAt < 1:2541123/149‑1 (MQ=255) tCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCCGTTTTTTTGCCAGCCCTTTGCCGCGGAt > 2:1604712/1‑149 (MQ=255) atatGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCCTTAAGGCCCGTTTTTTTGCCAGCCCTTTGCCGCGGATAGc > 1:2257011/1‑149 (MQ=255) tatGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGcc < 2:1852809/149‑1 (MQ=255) tGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCgg < 2:3531436/149‑1 (MQ=255) cTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGgaa < 1:3733597/149‑1 (MQ=255) aaaGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCCGAAACCAGCGTTTGAAACCCATCTCTCGCGCCTGCGCCAACGCCATTAAGGCCAGTTTTTTTTCCAGCCCTTTGCCGCGGATAGCCGggagaa > 1:1415967/1‑149 (MQ=255) aaaGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATGGCCGgaagaa < 2:2361950/149‑1 (MQ=255) aaaGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGgaagaa < 1:3478895/149‑1 (MQ=255) aGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGaaaa < 1:323292/149‑1 (MQ=255) cAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCCTTAAGGCCAGTTTTTTTTCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACa > 1:1710935/1‑149 (MQ=255) aaTGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATc > 2:4100606/1‑149 (MQ=255) aaTGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCAGCTCCAACGCCATTAAGGGCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATc > 1:1039930/1‑149 (MQ=255) tGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCtt < 1:1388859/149‑1 (MQ=255) cTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCtttt < 1:3808511/149‑1 (MQ=255) tAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAg < 2:1285629/149‑1 (MQ=255) tAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGGTTGAAACCCATCTCTCGCGCCGGCGCCATCGCCCTTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGCAAATACCTCTTTTGCAg > 1:2642076/1‑149 (MQ=255) aGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCCTCGCCCATAAGGCCAGTTTTTTTGCCAGCCCGTTGCCGCGGATAGCCGGAAGAAAATACCTCTTTTGCAGTTc > 2:3862566/1‑149 (MQ=255) aGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCCTCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTc < 1:1329336/149‑1 (MQ=255) gcgcAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCATCGTTTTAAACCCAACTCTCGCGCCAGCTCCAACGCCAATAAGGCCAGTTTTTTTGGCAGCCCTTTTCCGCGGCTAGCCGGAAGAAAATACATCTTTTTCAGTTCg > 1:988939/1‑149 (MQ=255) tGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAata < 1:3584776/149‑1 (MQ=255) gCTTCCTTTAAAAAAGCGGTCGTTTGCAGATAGCAGCGTTTGAAAACCAAAACACGCCCCGGCACCAACCCCAATAATGCCCGTTTTTTTTCCAACCCATTTCCCCGGATATCCGGAATAAAAAAAAAAATTTTCAGTTAGCAAaaata > 1:2751402/1‑148 (MQ=255) gCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATAAATATTTTTCAGTTCGCAAATATc > 1:2960393/1‑149 (MQ=255) cTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATcc < 2:2895103/149‑1 (MQ=255) cTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATcc < 2:497400/149‑1 (MQ=255) tCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTATTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGa < 1:428385/149‑1 (MQ=255) ccTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTTCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTAGCAAATATCCGac > 2:4365185/1‑149 (MQ=255) cattAAAAAAGCGGTCGTGTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGact < 2:1548097/147‑1 (MQ=255) ttAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAAACCAACTCTCGCGCCAGCTCCAAAGCCAATAAGGCCAGTTTTTTTGCCAGCCCTTTTCCGCGGATAGCCGGAAGAAAAAAAAAATTTTTCAGTTAGCAAATATACGactca > 2:3126412/1‑149 (MQ=255) ttAAAAAAGCGGTCGTGTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGCAGAAAATACATCTTTTGCAGTTCGCAAAAATACGactaa > 1:2485406/1‑147 (MQ=255) tAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGactcac < 2:3391480/149‑1 (MQ=255) aaGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAAAAACCGACTCACTCCCg > 2:2663581/1‑149 (MQ=255) gCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGt > 2:1510283/1‑149 (MQ=255) cGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGtt < 1:3457964/149‑1 (MQ=255) gTCGTTTCCAGATAGCAGCGTTTGAATCCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTaa < 2:257721/149‑1 (MQ=255) gTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTaa < 1:4512769/149‑1 (MQ=255) gTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTaa < 1:4587490/149‑1 (MQ=255) gTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCAGCTCCATCGCCAATAAGGCCAGTTTTTTTGCCAGCCCGTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATACGACTCACTCCCGGTTaa > 2:3946045/1‑149 (MQ=255) tCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGgcgc < 1:1591874/149‑1 (MQ=255) tCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGgcgc > 1:1474526/1‑149 (MQ=255) ccAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCt < 2:3802042/149‑1 (MQ=255) cAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTa > 2:2386749/1‑149 (MQ=255) aGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTAt > 2:1346915/1‑149 (MQ=255) aGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTAt > 1:1561113/1‑149 (MQ=255) aGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTAt > 1:3644416/1‑149 (MQ=255) aTAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATcc < 1:4301567/149‑1 (MQ=255) tAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATccc > 2:708786/1‑149 (MQ=255) agcagcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCa < 1:2412690/149‑1 (MQ=255) cagcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCAcc > 1:734014/1‑149 (MQ=255) agcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGAAAGCCGGAAGAAAATACATCTAATGCAGTTCGCAAATATCCGACTCACTCCCTGGTAATTGAGCTATCCCAccg > 1:836069/1‑149 (MQ=255) gcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTCATGGCGCTATCCCAccgc > 2:2861882/1‑149 (MQ=255) gcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCAccgc > 2:2151329/1‑149 (MQ=255) gcGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCAccgc > 1:3268964/1‑149 (MQ=255) tGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCAccgccgccg > 1:1228073/1‑149 (MQ=255) | ATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGTGCAGCCAAGCGCATAGTCGATATGCTCAAAGCCCAAATGCTCATAAAGCGCAATGGCTTCCTTTAAAAAAGCGGTCGTTTCCAGATAGCAGCGTTTGAAACCCATCTCTCGCGCCTGCTCCATCGCCATTAAGGCCAGTTTTTTTGCCAGCCCTTTGCCGCGGATAGCCGGAAGAAAATACATCTTTTGCAGTTCGCAAATATCCGACTCACTCCCGGTTAATGGCGCTATCCCACCGCCGCCGAC > CP009273/4468845‑4469141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |