| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 8.8% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 8.8% | 559.7 / 6.8 | 209 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (89/94); new base C (18/7); total (107/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.33e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCC > CP009273/4602977‑4603273 | gCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 1:3100656/149‑1 (MQ=255) cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAc < 2:3468005/149‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGt < 1:4529310/149‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCCCGGt > 2:902000/1‑149 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGtt < 2:1753227/149‑1 (MQ=255) tagtGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTg < 2:3092258/146‑1 (MQ=255) tATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTg > 2:692607/1‑149 (MQ=255) aTTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCCCGTTgg > 1:3269830/1‑149 (MQ=255) aTTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTTCTAGCCACCGTTgg > 1:1156454/1‑149 (MQ=255) ttGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGc < 1:1743893/149‑1 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTAGCCACGGTTTGCaa > 2:3917764/1‑149 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAt < 1:4017483/149‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTAt < 2:1037929/149‑1 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTCGCCACCGGTGGCACGCGAtt > 1:2076994/1‑149 (MQ=255) ccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAc < 2:373794/149‑1 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTg < 1:2130628/149‑1 (MQ=255) gggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTACCCACCCTTGGCAACCtaataaaag > 1:2454999/1‑146 (MQ=255) ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCCCCACGGTTGGGCAGCTATTAAATGa > 1:895193/1‑149 (MQ=255) aaGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCACGGTTGGCCAGCTATTAACAGaaaa > 1:680371/1‑149 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGaaaaa < 2:4545732/149‑1 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGaaaaa < 1:3696717/149‑1 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAg < 2:1522591/149‑1 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCACGGTTGGCAAGCTAGTAACTGTAACAg > 2:3937836/1‑149 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgc < 2:718456/149‑1 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAgcg < 1:588583/149‑1 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAAATGAAAAAgcg > 2:118310/1‑149 (MQ=255) tGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTAACGAGCTTGGCAGTCGGATTCAGGCGCTGCGTGAAGACTATAAAATTGGGCGTTTATGAGGTCGATAATTGCTAGCCCCCGTTGGCAAGCAATAAAAAGAAAAAacg > 2:119927/1‑149 (MQ=255) tatatTCTAAATTTATCCGCCTAAGCAATTACTTTGTATCGCGGTTGGCTTTCGGATTCCGGCGCTGCGTGAATACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGTTTGGAAAGATTTTAACTTAAAAAGcgccgc < 2:4441384/148‑1 (MQ=255) atatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCCGGTTGGCAAGCTATTAACTGAAAAAGcgccgca > 2:351280/1‑148 (MQ=255) atatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCCAGCTATTAACAGAAAAAGcgccgca > 2:4335071/1‑148 (MQ=255) atatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTAGCCACGGTTTGCAAGCGATTAACTGAAAAAGCCCCCCt > 1:4096412/1‑149 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCtt < 1:4589627/149‑1 (MQ=255) tCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCGTAcc > 2:1721165/1‑149 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGcc > 2:361818/1‑149 (MQ=255) aaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCGTAcccccc > 1:1499993/1‑149 (MQ=255) tttATCCGCCGAAGCCTTTACTTAGTATCGCGCTTGGCTGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCAt < 2:2722624/149‑1 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCTAGCCCCCGGGGGGAAACTATTAAAAGTAAAAGCGCCGCGTACCCGCCATc > 2:1134248/1‑149 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATc < 2:2010467/149‑1 (MQ=255) ccgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGt < 1:252732/149‑1 (MQ=255) ccgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCCCCGGTGGCAAGCTATTAAATGAAAAAGCGCCCCGTACCCCCCAACAGGt > 2:1609298/1‑149 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:2451297/149‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGAGTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:3555512/149‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGACGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:3555647/149‑1 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgt < 2:3263101/149‑1 (MQ=255) aGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtg > 2:756944/1‑149 (MQ=255) gCCATTACATATTATCGCGGTTGGCTGTGGTATTCCGGCGTTGCGTTATGACTATAAATTGGGGCGTTTATGCGGTGTTTATTTCCACGCCAGGGTTGGAAAGATTTTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 1:2732704/149‑1 (MQ=255) gCCATTACATAGTATCGCGCTTGGCAGCCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTTTGCGGTCGTTATTTCCGCGCCCCGGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 1:1287995/149‑1 (MQ=255) ccATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggt < 2:1241244/149‑1 (MQ=255) cATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggtg < 2:1453788/149‑1 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTTCACGCCCCGGGTGGGCAGCTATTAAATGTAAAAGCGCCGCTTACCCCCCAAAAGGTGCCAgtggtgt > 2:2296416/1‑148 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGa > 2:286678/1‑149 (MQ=255) ttACATTGTATCGCGGTTGGCCGTGGGTTTCCGGGGCTGCTTGAAGACTTTAAACTTGGGGGTTTTGGCGGTCTTTATTTCCTCGCCCCGGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGAc < 1:4249746/149‑1 (MQ=255) aCATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTAGCCAAGGTTGGGCAGCGATTAAATGGAAAATCGCCGCTTACCCGCCATCAGGTGCCAgtggtgtggc > 2:3315749/1‑145 (MQ=255) cATATTATCGCGCTTGGCTGTCGGTTTCCGGCGCTGCGTTAAGAATATAAACTTGGGCTTTTATGGGGTCGTTATTCCCTCGCCACGGTTGGCAAGATATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGcc < 1:23316/149‑1 (MQ=255) aTAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTACTCGCCACCGTTGGCCAGCTATTAACTGAAAAATCGCCCCTTACCCGCCATCAGGTGCCAGTGGTGACGCCg > 1:729041/1‑149 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACACGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCGTAACCGCCATCGGGTGCCAGTGGTGACGCCGGAATCg > 2:864328/1‑149 (MQ=255) ggggcttggcttgCGGATGCGGGCCTTGCTTTAATACTATAACCTGGGGGTTTTTTGGGTTCGTTTTTTCCTCCCCACGGTTGGCAAGATTTTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGa < 1:1518716/146‑1 (MQ=255) cgcgCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGa < 2:897350/149‑1 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTTGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGAt > 2:1069704/1‑149 (MQ=255) gcgcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACAAGCCACCGTTGGCAAGAAATTAAAATACAAAACGCCGCTTACCCGCCCACGGGTGCCACTGGTGTCGCCCGAATAGaa > 1:2471400/1‑148 (MQ=255) gcTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGTTCTTTATTTCCTCGCCACGGTTGGAAAGCTTTTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTg < 1:3378554/149‑1 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTTCTCGCCACCGTTGGCAAGCTATTAAAAGAAAAATCGCCGCGTAACCGCCAGCGGGTGGCAGGGGTGTCCCCGGAAACGATTGTc > 1:1066743/1‑149 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTc < 2:458391/149‑1 (MQ=255) ttGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACCGTTGGCAAGCTATTAACGGAAAAAGCGCCGCGTACCCGCCCTCTGGTGCCAGTGGTGACGCCGGAATCGATTGTc > 2:3113502/1‑149 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCa < 2:137088/149‑1 (MQ=255) aGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTTTTTCCTCGCCCCGGTTGGCAAGCTCTTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTcc < 2:1167876/149‑1 (MQ=255) gTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCACGCTCTTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGGGACGCCGGAAACGATTGTCATTCCg > 2:3763194/1‑149 (MQ=255) cGGATTCCGGCGCTGCGTGAATACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTACCTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 1:4408129/149‑1 (MQ=255) cGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcc < 2:2119919/149‑1 (MQ=255) ggATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTTGCAAGCTATTAAATGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGcca > 2:374257/1‑148 (MQ=255) ggATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCCAGCTATTATCTGAAAAAGCGCCGCGTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCt > 2:4155377/1‑149 (MQ=255) gttGAAGACTATAACCTTGGGCGTTCATGCGGTCGTTATTCCCCCCCCCGGGGTGGCAACCTCTTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCaa < 1:3466199/147‑1 (MQ=255) cGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCaa < 2:4296264/149‑1 (MQ=255) tataAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCt < 2:625944/149‑1 (MQ=255) taAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTGGCAAGCTATTAACAGAAAAAGCGCCGCGTAACCCCCAACGGGTGCCAGTGGTGACGCCCGAAAAGATTTTAATTCCGCCAGCGCCACGCGCCAACCATAAGCAgg > 2:2413066/1‑149 (MQ=255) aaaCTTGGGCGTTTATGCGGTCGTTATTTCCACGCCACGGTTTGCCCCCTAATAACAGAAAAAGCGCCGCTTACCCGCCATCAGGTGCCAGTGGTGACGCCGGCAAAGAATTTCCATCAGCCTGCGCCACTCGCCAACGAAACGCGGGt > 2:3289156/1‑149 (MQ=255) aaaCTTGGGCGTTTATGCGGTCGTTATTTACTCGCCACGGTTTGCAAGCTATTAACAGAAAAAGCGCCGCTTAACCCCCAAAGGGTGCCACTGGTGACGCCGGAATACATTTTCAATACGCCATCGCCCCTCGCCAACGAAAACCTGGt > 2:3748395/1‑149 (MQ=255) aaCTTGGGCGTTTTTGGGGTCTTTATTTCCCCGCCAGGTTTGGAAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGtt < 1:1920146/149‑1 (MQ=255) tGGGGGTTTTGGGGGTCTTTATTTCCTCGCCTGGGTTGGAAAGTTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCg < 1:902344/149‑1 (MQ=255) gTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTg < 2:2977113/149‑1 (MQ=255) gTTTATGCGGTCGTTATTTACAAGCCACCGTTTGCCAGCAAATAACAGAAAAAGCGCCGCATACCCCCCAACAGGTGCCAGTGGTGACGCCCGAAACGCATGTCATTACCCCAGCGCCCCGCGCCCACCAAAAGCAGGTTGCCGAACTg > 2:3159972/1‑149 (MQ=255) aTGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCg < 1:3826495/149‑1 (MQ=255) tGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGa < 2:2890217/149‑1 (MQ=255) tGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGa < 2:3946035/149‑1 (MQ=255) ggTCGTTATTTCCTCGCCACGGTTGGCAAGCTAATAACTGAAAAAGCGCCGCTTACCCCCCAACTGGTGCCAGTGGGGACGCCGGAAACGATTGGCATTCCGCCTGCGCCAGTCGCCAACGCTACCCTGGTTGCCGAAGTGAGCGACGc > 2:4129790/1‑149 (MQ=255) gTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:1456698/1‑149 (MQ=255) gTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:3521169/1‑149 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc < 2:4105387/149‑1 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:2231714/1‑149 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 2:2151299/1‑149 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 2:853266/1‑149 (MQ=255) ttATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:615883/1‑149 (MQ=255) tATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCa > 1:3447484/1‑149 (MQ=255) aTTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg > 1:1804354/1‑149 (MQ=255) aTTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg > 1:3033042/1‑149 (MQ=255) cTCGCCATGGTTGCCAAGTTTTAAATTTAAAAAGCGCCGCTTACCCGCCATATGGGGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 1:954606/149‑1 (MQ=255) cTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa < 2:172344/149‑1 (MQ=255) tCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc > 2:3565046/1‑149 (MQ=255) tCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAAc < 2:4381149/149‑1 (MQ=255) aCGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGAccc > 2:4475770/1‑149 (MQ=255) | GCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCC > CP009273/4602977‑4603273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |