Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 235,019 C→A 32.6% V69L (GTA→TTA)  ykfM ← lethality reduction protein, putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273235,0190CA32.6% 349.8 / 74.9 240V69L (GTA→TTA) ykfMlethality reduction protein, putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (82/72);  new base A (41/44);  total (123/117)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

TATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAAA  >  CP009273/234871‑235166
                                                                                                                                                    |                                                                                                                                                   
tatCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATATCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAc                                                                                                                                                     <  2:3846504/149‑1 (MQ=255)
 atCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACa                                                                                                                                                    <  1:2732654/149‑1 (MQ=255)
  tCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACAt                                                                                                                                                   <  1:4282830/149‑1 (MQ=255)
   ccTGTGACAACAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATg                                                                                                                                                  <  1:3893455/149‑1 (MQ=255)
     tgtgACACAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGaa                                                                                                                                                <  2:2743067/149‑1 (MQ=255)
       tgACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAATTAAAATTAAATGAata                                                                                                                                              >  1:661410/1‑149 (MQ=255)
         aCAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATAtt                                                                                                                                            <  1:1767971/149‑1 (MQ=255)
            aaaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaa                                                                                                                                         <  2:558510/149‑1 (MQ=255)
             aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAATTATTTTATTATAGTAATTAAAATTAAATGAATATTTaaa                                                                                                                                        >  1:1436721/1‑149 (MQ=255)
             aaGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTaaa                                                                                                                                        <  1:2801227/149‑1 (MQ=255)
                gAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTATAGTAAGTAAAATTAAATGAATAATTAAAAAg                                                                                                                                     >  1:3362693/1‑149 (MQ=255)
                 aGCTATTACAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAgg                                                                                                                                    <  2:3192561/149‑1 (MQ=255)
                 aGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATGATTTTATTATATTAAGTAAAATTAAATTAATATTTaaaaatg                                                                                                                                    >  2:2680805/1‑147 (MQ=255)
                   cTATTAAAGGTTCTATTAAGATATCTATTAGTAAAAATATAAGTGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                                  <  2:295190/149‑1 (MQ=255)
                   cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAATAATGATTTTATTATAGTAAGTAAAAATACAATAATATTTAAAAATGaa                                                                                                                                  >  1:500920/1‑149 (MQ=255)
                   cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                                  <  2:2255377/149‑1 (MQ=255)
                   cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                                  <  2:3021814/149‑1 (MQ=255)
                   cTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGACTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaa                                                                                                                                  <  2:3680876/149‑1 (MQ=255)
                    tATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaa                                                                                                                                 <  2:3332612/149‑1 (MQ=255)
                     aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTTATAATTATTTTATTATAGTAATTAAAATTAAATTAATAATTAAAAATGaaaa                                                                                                                                >  1:3494787/1‑149 (MQ=255)
                     aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATTAATTTATTATCGTAAGTAAAATTAAATTAATATTTAAAAATTaaaa                                                                                                                                >  1:3210860/1‑149 (MQ=255)
                     aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGaaaa                                                                                                                                <  1:2975740/149‑1 (MQ=255)
                     aTTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTTTTTTAGAATGTTTTTATTTTATTTATTAAAAATAAATGAATATTTAAAAATGaaaa                                                                                                                                >  1:80051/1‑149 (MQ=255)
                      ttAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAAc                                                                                                                               <  2:2058837/149‑1 (MQ=255)
                       tAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAAGAATTATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGaaaaag                                                                                                                              >  1:1855604/1‑147 (MQ=255)
                        aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAAGAATTATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGAAAAAGa                                                                                                                             >  1:2511542/1‑149 (MQ=255)
                        aaaGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGa                                                                                                                             <  2:3728663/149‑1 (MQ=255)
                          aGGTGCTATTACGATTGGTATTAGTAAAAATATAATAGTTAGCTGTATTGTTATTTCTTTTGCGAAATTGACTACATTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACa                                                                                                                           <  2:4034937/149‑1 (MQ=255)
                          aGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACa                                                                                                                           >  2:618670/1‑149 (MQ=255)
                           ggTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAAGAATGATTTTATTATAGTAAGTAAAAATACAAGAATATTTAAAAATTaaaaaaaaaa                                                                                                                          >  1:819146/1‑143 (MQ=255)
                              gCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGaa                                                                                                                       >  2:1171871/1‑149 (MQ=255)
                                         agatattatTAAAAATATAATAGTTAGCTGTATTTTTATGTCTGTGGCTAATTTTACTACTTTCTTTTTTTTTATTAAGATTGTTTTTATTATCTTAATTAAAATTACATTAATATTAAAAAAGTAACACGACATGAAACCGAAGcaca                                                                                                            <  1:2619288/146‑1 (MQ=255)
                                         aGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAATGATTTTATTATAGTAAGTAAAATTACATGAATAATTAAAAATGAAAACTACATGAAACCGAAAcaca                                                                                                            >  2:3456504/1‑149 (MQ=255)
                                          gCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTATTAATAATGATTTTATTATAGTAAATAAAATTAAATGAATATTTAAAAATGAAAACCACAAGAAACCGAAGcacat                                                                                                           >  2:3108771/1‑148 (MQ=255)
                                          gCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAATAAAGATTTTTTTATAGTAATTAAAATTAAAATAATATTTAAAAATGAAAAAGAAAAGAAACCCAAAcacac                                                                                                           >  1:2371749/1‑148 (MQ=255)
                                            tATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCTAAATTGACTACCTTCGTTTTTTTGATTAAGATTGTTTTTATTATCTTAAGTAAAATTACATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGaa                                                                                                         <  2:1837576/149‑1 (MQ=255)
                                             aTTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAAATATTTTATTATAGTAAGTAAAATTAAAAGAATAATTAAAAATGAAAAAGACAAGAAAACCAAGCACAGAAt                                                                                                        >  1:3960662/1‑149 (MQ=255)
                                              ttataaaaaaTATAAGTTTTTGGTTTATTTTTTTGTCTGGGGCTAATTTGACAACCTTGTTTTTTTTTTTTAATATTTTTTTTATTATCTTAATAAAAATTAAATTAATTTTAAAAAAGGAAAACGACATGAAACCGAAGCACAGAATc                                                                                                       <  1:137441/144‑1 (MQ=255)
                                              ttAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAAGATTTTATTATCGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAACGACATTAAACCGAATCACAGAATc                                                                                                       >  2:100313/1‑149 (MQ=255)
                                                aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTTACTACCTTCTTTTTTTTGATTAAGAATGATTTTATTATCGTAATTAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCaa                                                                                                     <  2:1781656/149‑1 (MQ=255)
                                                aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAATAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGAAAAAGACATGAAAACGAATCACAGAATaaa                                                                                                     >  1:2581540/1‑149 (MQ=255)
                                                aGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTGTTTTTGATTAATAATTATTTTATTATAGTAAGTAAAAATAAATTAATATTTAAAAAGGAAAACGACATTAAAACGAAGCACCGAATaaa                                                                                                     >  1:2582923/1‑149 (MQ=255)
                                                  tAAAATTATTAGAGTTTGGTTTTTTTTTTTGTGTGTGGTTATTTTGACTACTTTGTTTTTTTTTTTTAATATTTTTTTTTTTTTCTTATGTAAATTTAATTTTTTATTTAAATTGTAACACGACATGAAACCGAAGCACAGAATCAACa                                                                                                   <  1:4358490/149‑1 (MQ=255)
                                                  tAAAAATATTTGTTTTAGCTTTTTTGTTTTTTCTGTGGTTAATTTGATTACTTTCTTTTTTTTGTTTTTGATTGTTTTTTTTTTCGTAAGTAAATTTATATTAATTTTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACa                                                                                                   <  2:528810/149‑1 (MQ=255)
                                                  tAAAAATATATGTGTTAGCTTTTTTTTTATGTCTGTGGCTAATTTTAATACATTCTTTTTTTTGATTAATAATTATTTTATTATGTTAATTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACa                                                                                                   <  2:935089/149‑1 (MQ=255)
                                                   aaaaaTTTTTGAGTTCGCTTTTTTTTTTTGTCGGTGGCTAATTTGACTACCTTGGTTTTTTTGATTAAGATTGATTTTATTATCGTAATTAAATTTACTTGAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACAt                                                                                                  <  1:4045594/149‑1 (MQ=255)
                                                       atatAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAAATATTTTATTATCGTAAGTAAAATTAAAAGAATATTTAAAAAGGAAAAACACAAGAAACCCAAGCACAGAATCAACaaaaac                                                                                              >  1:1723812/1‑144 (MQ=255)
                                                         ataAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAATGAAAACGACATGAAACCGAAGCACAGAATCAACAATCTCCa                                                                                            >  2:1402027/1‑149 (MQ=255)
                                                         ataAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATTAAACCGAATCACAGAATCAACATTCTCCa                                                                                            >  2:129739/1‑149 (MQ=255)
                                                             gagTTAGCTTTTTTTTTTTGTCTGTGCCTAATTTGACTACCTTCGTTTTTTTGATAAATAATGATTTTATTATCGTAATTAAAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCa                                                                                        <  1:1500593/149‑1 (MQ=255)
                                                              agTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACAATCTCCAATCAt                                                                                       >  2:2016064/1‑149 (MQ=255)
                                                               gTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTAAATGAAAATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAAACAACATTCTCCAataata                                                                                      >  1:2226994/1‑149 (MQ=255)
                                                                ttAGCTGTATTTTTTTGTCTGTGGCGAAATGGACTACCTTCTTTTTTTTTATTAAGAATGATTTTATTATCGTATGTAAAATTAAATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaa                                                                                     <  2:1645824/149‑1 (MQ=255)
                                                                  tgCTGTATTTTTTTTTCTGGGGCTAATTTGACTACCTTCTTTTTTTTGATTAACATTTTTTTTATTATCTTAATTAAAATTAAATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATaaaa                                                                                   <  1:4109215/148‑1 (MQ=255)
                                                                     tGTTTTTTTATTTCTGTGGCTAATTTGACTACATTTTTTTTTTTTATTAATATTTTTTTTATTATCTTAATTAAATTTAAATTAATTTTAAAAAATTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAatat                                                                                <  1:3516387/149‑1 (MQ=255)
                                                                      gTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTTTTTAAGAATTATTTTATTATAGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAAACCAAGCACAGAAAAAACAATATCCAATAAAAAAATAtt                                                                               >  1:1014303/1‑149 (MQ=255)
                                                                      gTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATAGTAAGTAAAATTAAATGAATATTTAAAAAGGAAAAAGACATGAAACCGAAGCACAGAATCAACAATAACCAATAAAAAAATAtt                                                                               >  1:3713953/1‑149 (MQ=255)
                                                                       tATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATAttt                                                                              >  2:330015/1‑149 (MQ=255)
                                                                        aTTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGTTTAATAATGATTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAATGAAAACGACAAGAAAACGAAGCACAGAATCAACATTATCCAATCAAAAAATAatta                                                                             >  1:354288/1‑148 (MQ=255)
                                                                         tttttttgtgtgtgGCTAATTTTACTACATTGTTTTTTTTTTTTAATAATTTTTTTTTTATCTTATTAAAATTTAATTTATTATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTcc                                                                            <  1:1004750/143‑1 (MQ=255)
                                                                            ttATGTCTGTGGCTAATTTTACTACCTACTTTTTTTTTTTTAAGATTTTTTTTTTTATCGTAATTAAAATTACATCAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTg                                                                         <  2:3894943/149‑1 (MQ=255)
                                                                              ttGTTTGTGGCTATTTTGACTACCTTTTTTTTTTTTATTATTTTTTTTTTTTTTTTCTTATTAAAATTTAATTTAATATTAAAAAATGAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGa                                                                       <  1:3109515/148‑1 (MQ=255)
                                                                              aTGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTATCCAATCAAAAAAAATTTCCGTGGa                                                                       >  2:3610047/1‑149 (MQ=255)
                                                                                 tCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCa                                                                    >  2:4094246/1‑149 (MQ=255)
                                                                                    gtgGCGAAATTGACTACCTTCGTTTTTTTGTTTAAGAATGATTTTATTTTAGTAAGTAAAATTAAAGGAATATTTAAAAAAGAAAACGACAAGAAACCCAAGCACACAATAAACAATATCCAATCAAAAAATATTTAAGTGGGGCCttt                                                                 >  1:1603593/1‑149 (MQ=255)
                                                                                       gctaatttGACTACTTTCGTTTTTTTTTTTAATAATTATTTTTTTATCGTATTTAAAATTAAATTAATATTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTttat                                                              <  1:684678/143‑1 (MQ=255)
                                                                                                    acttatttttttttATTAATATTTTTTTTATTATCTTAATTAAAATTACATTAATATTAAAAAAGCAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATaga                                                 <  1:1930714/143‑1 (MQ=255)
                                                                                                      ttCGTTTTTTTGATTAAGAATGATTTTATTATCTTAATTAAATTTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAgg                                               <  2:2371749/149‑1 (MQ=255)
                                                                                                       tCGTTTTTTTTATTAATAATTATTTTATAATCTTAATTAAATTTACATTAATATTAAAAAAGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                                              <  1:3553781/149‑1 (MQ=255)
                                                                                                       tCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                                              >  1:2535059/1‑149 (MQ=255)
                                                                                                       tCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGt                                              >  2:2362623/1‑149 (MQ=255)
                                                                                                         tttttttttttTAAAATTTATTTTATAAGCGTAATTAAAATAAATTTAAAATTTAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                            <  1:1202164/148‑1 (MQ=255)
                                                                                                         ttttttttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                            <  2:156141/148‑1 (MQ=255)
                                                                                                         gTTTTTTTGTTTAATAATGTTTTTATTATCGTAAGTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGttt                                            <  1:752897/149‑1 (MQ=255)
                                                                                                            ttttttATTAATAATGATTTTATTATCTTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAAc                                         <  1:4525743/149‑1 (MQ=255)
                                                                                                              tttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTc                                       >  2:478269/1‑149 (MQ=255)
                                                                                                              tttGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTc                                       >  2:4454351/1‑149 (MQ=255)
                                                                                                               tttataaaGAATTATTTTATTATCGTAATAAAAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTcc                                      <  1:3697190/143‑1 (MQ=255)
                                                                                                                 gATTAAGATTTATTTTTTTATCGTATTTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCgg                                    <  1:1779902/149‑1 (MQ=255)
                                                                                                                  aTTAATAATGATTTTATTATATTAATTAAATTTAATTTAATATTTAAAATGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                                   <  1:616409/149‑1 (MQ=255)
                                                                                                                  aTTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGt                                   >  2:1767112/1‑149 (MQ=255)
                                                                                                                   ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                                  >  2:2453186/1‑149 (MQ=255)
                                                                                                                   ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                                  >  1:3310914/1‑149 (MQ=255)
                                                                                                                   ttAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTa                                  >  2:1366551/1‑149 (MQ=255)
                                                                                                                         atcaTTTTATTATCTTAATTAAAATTACATTAATTTTTAAAAAGCAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc                            <  1:2091659/146‑1 (MQ=255)
                                                                                                                         aTGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAAc                            >  2:1919426/1‑149 (MQ=255)
                                                                                                                          tGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACa                           >  1:1261297/1‑149 (MQ=255)
                                                                                                                              ttttttATCTTAATTAAATTTACTTTATTTTTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAaaga                       <  1:2680805/149‑1 (MQ=255)
                                                                                                                                   tatCTTAATTAAAATTACATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAt                  <  2:1247136/149‑1 (MQ=255)
                                                                                                                                   tatCTTAATTAAAATTAATTGAATATTTAAAAAGTAACACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCAt                  <  1:197705/149‑1 (MQ=255)
                                                                                                                                     tCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTg                >  1:4162810/1‑149 (MQ=255)
                                                                                                                                       ttaattaaAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGaa              <  1:2606883/148‑1 (MQ=255)
                                                                                                                                       ttaagtaaAATTAAATTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGaa              <  2:1436898/148‑1 (MQ=255)
                                                                                                                                          agtaaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGc           >  1:4136937/1‑149 (MQ=255)
                                                                                                                                           ttaaAATTAAATTAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCa          <  1:953841/148‑1 (MQ=255)
                                                                                                                                            taaaataaaaTTAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg         <  1:1607799/149‑1 (MQ=255)
                                                                                                                                            taaAATTACATGAATATTTAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg         <  1:3784375/149‑1 (MQ=255)
                                                                                                                                            taaAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAg         >  1:3140471/1‑149 (MQ=255)
                                                                                                                                                   aCATTAATATTAAAAAAGTAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGaaaaa  <  1:4512828/149‑1 (MQ=255)
                                                                                                                                                   aCATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGaaaaa  >  1:3414414/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TATCCTGTGACAAAAGGAGCTATTAAAGGTGCTATTACGATAGCTATTAGTAAAAATATAAGAGTTAGCTGTATTGTTATGTCTGTGGCGAAATTGACTACCTTCGTTTTTTTGATTAAGAATGATTTTATTATCGTAAGTAAAATTACATGAATATTTAAAAAGGAAAACGACATGAAACCGAAGCACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTGAATATAGAGGTTTAACTCCGGTAAAAAACAAAGAAGCATTGAATGCAGGGAAAAA  >  CP009273/234871‑235166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: