| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3180783 | NA (NA) | 137 (0.460) | 84/274 | NT | 40.9% | pseudogene (4/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| ? | CP009273 | = 3833569 | 201 (0.670) | intergenic (‑216/‑6) | nlpA/yicS | cytoplasmic membrane lipoprotein‑28/putative periplasmic protein | |||||
Only 100 of 564 total aligned reads displayed.
ACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAG > CP009273/3833420‑3833718 | cgCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGa < 1:1891971/150‑1 (MQ=255) cctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaacgagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAATGTTGAAt > 2:2050847‑M1/140‑150 (MQ=255) ctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATc < 1:4944030‑M1/12‑1 (MQ=255) tCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCa < 1:24029/150‑1 (MQ=255) ggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGaa < 1:3470554‑M1/18‑1 (MQ=255) tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAAc > 1:598925‑M1/131‑150 (MQ=255) aGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgccccta < 2:4672622‑M2/150‑13 (MQ=255) aaTAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctata > 2:2767562‑M2/1‑136 (MQ=255) aaTAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCa > 1:2831504/1‑150 (MQ=255) aTAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCaa < 1:798780/150‑1 (MQ=255) tAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAAc < 2:356635/150‑1 (MQ=255) aaaaaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACg > 1:1192079/1‑150 (MQ=255) aaaGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGac > 1:4559046/1‑150 (MQ=255) taaTAAAATTGTAATATAAAGTCTGGCAATTATTACTGACCACGCAAGCGCGTTTCGTACTGCATGATGAGCGCGTTTAAAGAAAACTACAATTATGCTTAATTCGATACAAATTTGTAAATGGTTGAATCCATGAAACCAACGACacta < 1:580515/149‑1 (MQ=255) aaTAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCAATCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACactac > 2:1490357/1‑150 (MQ=255) aaaaGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGc > 2:885998/1‑150 (MQ=255) aaaGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctg < 2:3424532‑M2/150‑29 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCtt < 1:365480‑M1/37‑1 (MQ=255) aGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTa < 2:4162282/150‑1 (MQ=255) gTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgtta > 2:3014345‑M2/1‑119 (MQ=255) ggAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAttt < 1:2366549/150‑1 (MQ=255) ggAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAttt < 2:1528967/150‑1 (MQ=255) ggAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAttt < 2:1131092/150‑1 (MQ=255) ggAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAttt > 2:3117260/1‑150 (MQ=255) ggAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTAttt > 2:518399/1‑150 (MQ=255) taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCAc > 1:1703847‑M1/106‑150 (MQ=255) taAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaa > 1:359365‑M2/1‑111 (MQ=255) aaaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACttt > 1:4876797/1‑150 (MQ=255) aaGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGAATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtttt > 1:2634954/1‑150 (MQ=255) catcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACttttt > 2:2107141‑M1/101‑150 (MQ=255) aGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACttttt > 2:4530063/1‑150 (MQ=255) gTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACtttttt < 2:971207/150‑1 (MQ=255) tcaatcatctgttctccactgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTc > 1:4818818‑M1/99‑150 (MQ=255) tCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTc < 1:1602128/150‑1 (MQ=255) cACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaa < 1:3945534‑M2/150‑50 (MQ=255) aCTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATg > 1:3109768/1‑150 (MQ=255) ttcttACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcc > 2:3789172‑M2/1‑98 (MQ=255) tACTGACCACGCAAGCTCGTTTCTTACAGCCTTATGAGAGCGTTTAAAGCAAAATACACTTATGCTTCTTTCGATACACATTTGTAAATGGTTGAATCCATGAAACAAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGc < 1:1160786/150‑1 (MQ=255) tACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct < 1:3035686‑M2/150‑57 (MQ=255) aatGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCa > 1:1829320/3‑150 (MQ=255) aCTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg > 2:1976773‑M2/1‑93 (MQ=255) aCTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctg > 1:1978964‑M2/1‑93 (MQ=255) cTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCAt > 2:2227700/1‑150 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATc > 1:4199297‑M1/84‑150 (MQ=255) gactagtctaaaaactagtattaagactatcacttatttaagttatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtata > 1:1350020‑M1/79‑150 (MQ=255) gactagactaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGtata > 1:110802‑M1/79‑150 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCCTCGTATACg < 2:1313477‑M1/74‑1 (MQ=255) aGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCg < 1:2720922/150‑1 (MQ=255) ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAg < 2:4987631‑M1/79‑1 (MQ=255) gcgTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATGTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGGCGAGt > 1:227422/1‑150 (MQ=255) aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAACGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTc > 1:1023644‑M1/70‑150 (MQ=255) aaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTc > 2:4080999‑M1/70‑150 (MQ=255) gTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCg > 2:4425653/1‑150 (MQ=255) gTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCg < 1:4472288/150‑1 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGc < 1:4054960‑M1/83‑1 (MQ=255) ttCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGcc < 2:4897031/150‑1 (MQ=255) tagtattaagactatcacgtatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCttt > 2:3976419‑M1/64‑150 (MQ=255) cATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataa > 2:4633468‑M2/1‑65 (MQ=255) tgatgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc > 1:5117211/1‑150 (MQ=255) agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCAc > 2:406216‑M1/56‑150 (MQ=255) gatgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACt < 1:2680055/150‑1 (MQ=255) atgaGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTg > 2:588822/1‑150 (MQ=255) ttatttaagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGc < 2:1587522‑M1/105‑1 (MQ=255) aTGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCa > 1:477703/1‑150 (MQ=255) tGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaa < 2:2331500/150‑1 (MQ=255) gAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaaa > 2:1755/1‑150 (MQ=255) aaaGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCaaaa > 2:718341/1‑150 (MQ=255) aagtgatattggttgtctggagattcagggggccagtctAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAaga > 2:4944030‑M1/40‑150 (MQ=255) gCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggat < 2:1048037‑M2/150‑105 (MQ=255) aaaCTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGaa > 2:3276911/1‑150 (MQ=255) aaCTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGaaa > 1:2125243/1‑150 (MQ=255) acacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCa > 2:5065122/1‑150 (MQ=255) cacTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg < 2:3499855‑M2/150‑113 (MQ=255) cTTATGCTTCATTCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt < 1:4149781‑M2/150‑115 (MQ=255) ttATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGt > 2:2929531/1‑150 (MQ=255) aTGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTAt < 1:1482988/150‑1 (MQ=255) tGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTAtt > 1:29341/1‑150 (MQ=255) tCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaa > 1:1247256‑M2/1‑24 (MQ=255) tCGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaa > 2:2541982‑M2/1‑24 (MQ=255) tCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGAtt < 2:4004480/150‑1 (MQ=255) cGATACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac < 1:4359322‑M2/150‑128 (MQ=255) aTACACATTTGTAAAAGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc < 1:5034847‑M2/150‑130 (MQ=255) tAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGc > 1:666783/1‑150 (MQ=255) AAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCAc > 1:2015147‑M1/1‑150 (MQ=255) aGGTTGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt < 1:4642311‑M2/150‑145 (MQ=255) ggTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGcc > 1:3813571/1‑150 (MQ=255) ttGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCcac > 2:4838408/1‑150 (MQ=255) ttGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCcac < 1:939666/150‑1 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct > 1:3558084‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct > 1:3285365‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct < 1:1765801‑M2/150‑149 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct < 2:2712006‑M2/150‑149 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct > 2:929468‑M2/1‑2 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct < 1:4320896‑M2/150‑149 (MQ=255) tGgatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct > 2:1658942‑M2/1‑2 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctg > 1:2527844‑M2/1‑1 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctg < 2:1798204‑M2/150‑150 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctg > 2:241187‑M2/1‑1 (MQ=255) ggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctg > 2:2636431‑M2/1‑1 (MQ=255) gAATCCATTAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAg < 2:3677502/150‑1 (MQ=255) | ACGCTATCGATAAGAATAAAAAGGAATAAAAGTGGAATATAAAGTCTGGCACTTCTTACTGACCACGCAAGCGCGTTTCGTACAGCATGATGAGAGCGATGAAAGCAAACTACACTTATGCTTCATTCGATACACATTTGTAAAAGGTTGAATCCATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAG > CP009273/3833420‑3833718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |