| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,851,275 | G→T | 22.2% | H164N (CAT→AAT) | yidJ ← | sulfatase/phosphatase superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,851,275 | 0 | G | T | 22.2% | 815.8 / 177.3 | 313 | H164N (CAT→AAT) | yidJ | sulfatase/phosphatase superfamily protein |
| Reads supporting (aligned to +/- strand): ref base G (105/138); new base T (35/35); total (140/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
TCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCG > CP009273/3851127‑3851421 | tagtagtaAAAATCAGCGTATTTCTCTAAATACTCCACCTGACAGGTGAACGTGTGATGCGGCTCATCATACGAATCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATgc < 1:1907400/148‑1 (MQ=255)tCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTAAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGAAgc > 2:586155/1‑150 (MQ=255) cGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATgcg > 1:1197490/1‑150 (MQ=255) tagtaAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGcc < 2:3730445/150‑1 (MQ=255) agtaAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGccc > 2:463447/1‑150 (MQ=255) gtaAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCa > 1:4031177/1‑150 (MQ=255) taAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAg < 1:561407/150‑1 (MQ=255) aGCGTATTTCTCTTAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGt < 1:184962/150‑1 (MQ=255) aGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGt < 1:116990/150‑1 (MQ=255) cGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGttt < 2:4483513/150‑1 (MQ=255) gTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTtc < 2:4910323/150‑1 (MQ=255) tttCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTtcgtc > 2:4853842/1‑150 (MQ=255) ttCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTtcgtcg > 1:38164/1‑150 (MQ=255) ttCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTtcgtcg > 2:244704/1‑150 (MQ=255) ttCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTtcgtcg > 1:1118096/1‑150 (MQ=255) tctcTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGa > 1:3204848/1‑150 (MQ=255) tctcTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGa > 2:5023158/1‑150 (MQ=255) ctAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGatat < 1:1027162/150‑1 (MQ=255) tAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATg > 2:1327523/1‑150 (MQ=255) aaTACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGt > 2:2757398/1‑150 (MQ=255) aTACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGtt < 2:3263196/150‑1 (MQ=255) aTACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGtt < 2:3771998/150‑1 (MQ=255) aTACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGtt > 1:1406954/1‑150 (MQ=255) aCTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATg < 1:1631342/145‑1 (MQ=255) tCCACCGGACAGGTGACCGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGAGACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGcc < 1:2027555/150‑1 (MQ=255) tCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGcc < 1:3109726/150‑1 (MQ=255) ccACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCt > 2:2023370/1‑150 (MQ=255) aCCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGt > 1:4308763/1‑150 (MQ=255) cGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTaa > 1:690864/1‑150 (MQ=255) cGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTaa < 2:89898/150‑1 (MQ=255) ggACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTaaa < 1:2178967/150‑1 (MQ=255) ggACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTaaa < 2:816194/150‑1 (MQ=255) gACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAAt > 1:3268869/1‑150 (MQ=255) cAGGTGAACGGGTGATGCGGCTCATCAGACGAACCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGGTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGGTTCGTCGATATGGTTCGCCTGTAAATCt < 2:1432463/150‑1 (MQ=255) gAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGAc > 2:1672191/1‑150 (MQ=255) cGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCt < 1:850356/150‑1 (MQ=255) cGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCt > 1:2387524/1‑150 (MQ=255) ggTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGt < 2:4156186/150‑1 (MQ=255) tGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGttt > 2:3039237/1‑150 (MQ=255) aTGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAg < 2:922756/150‑1 (MQ=255) aTGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGATCGCCTGTAAATCTTCGACGCTGTTTAg > 1:3767067/1‑150 (MQ=255) ggCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCa > 2:4302905/1‑150 (MQ=255) gCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCAt < 1:4710494/150‑1 (MQ=255) tcatcaTACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTg > 1:34667/1‑150 (MQ=255) tcatcaTACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTg < 2:2133511/150‑1 (MQ=255) tcatACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTgcgc > 2:1272316/1‑150 (MQ=255) tACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCcac < 2:1136574/150‑1 (MQ=255) aCGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCcaca < 2:4793822/150‑1 (MQ=255) aCGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCcaca < 2:2328208/150‑1 (MQ=255) cGAAACCACCATCAGGAAAGGCTCGTCTGCGTGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAg < 1:2890379/150‑1 (MQ=255) aaaCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGc > 1:1132495/1‑150 (MQ=255) aaCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCt < 1:369110/150‑1 (MQ=255) ccaccaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTaa < 2:574823/150‑1 (MQ=255) ccaccaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTaa < 2:3446007/150‑1 (MQ=255) accaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAtc < 2:1795859/150‑1 (MQ=255) ccaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAtct < 1:3551951/150‑1 (MQ=255) ccaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAtct > 2:4322523/1‑150 (MQ=255) cAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCttt > 2:1178501/1‑150 (MQ=255) ggAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCttttt > 2:210167/1‑150 (MQ=255) aaaGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTcc < 2:1363862/150‑1 (MQ=255) aGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGt > 1:4255892/1‑150 (MQ=255) ggCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTc > 1:248431/1‑150 (MQ=255) tCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGt < 2:3099210/150‑1 (MQ=255) gTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTc > 1:336617/1‑150 (MQ=255) gTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTc < 2:4670386/150‑1 (MQ=255) gTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTc > 1:3036837/1‑150 (MQ=255) gTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTc > 1:2965096/1‑150 (MQ=255) tGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCt > 1:4960159/1‑150 (MQ=255) gcgcgcAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAg < 1:2269619/150‑1 (MQ=255) cgcgcAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGa < 2:4033779/150‑1 (MQ=255) gcAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAg > 1:769215/1‑150 (MQ=255) cAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGt > 1:507377/1‑150 (MQ=255) aGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGtt > 1:2919860/1‑150 (MQ=255) cTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGc > 1:2679941/1‑150 (MQ=255) gCAGAAAATCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCAt > 1:457475/1‑150 (MQ=255) gCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCAt < 1:1043852/150‑1 (MQ=255) gCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCAt > 2:1155607/1‑150 (MQ=255) cAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCaac > 2:323649/1‑148 (MQ=255) gAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGa < 2:5145388/150‑1 (MQ=255) aaaTCCACCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAAc < 2:364115/150‑1 (MQ=255) ccACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGt < 1:1557126/150‑1 (MQ=255) cACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTa < 2:1074130/150‑1 (MQ=255) aCCGCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTAGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTaa < 2:4954417/150‑1 (MQ=255) aCCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTaa > 1:2698321/1‑150 (MQ=255) gCCCGATTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCa < 1:3518166/150‑1 (MQ=255) gCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCa > 1:4817199/1‑150 (MQ=255) ccGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGc < 2:2583854/150‑1 (MQ=255) cGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCg < 1:419145/150‑1 (MQ=255) aTTGCTGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTc < 2:44535/150‑1 (MQ=255) tGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTccc < 1:1156697/150‑1 (MQ=255) tGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACt > 2:3200609/1‑150 (MQ=255) tGATACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACt > 2:2914525/1‑150 (MQ=255) gATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTc > 1:2202346/1‑150 (MQ=255) gATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTc < 2:2489710/150‑1 (MQ=255) aTACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTcc < 2:2689510/150‑1 (MQ=255) aTACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCTGCGTCCCACTcc < 2:1909763/150‑1 (MQ=255) aTACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTcc > 2:219540/1‑150 (MQ=255) tACGATTCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCcg < 2:187837/150‑1 (MQ=255) aCGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCcgg < 1:3916372/150‑1 (MQ=255) gATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCcggcg < 1:4884121/150‑1 (MQ=255) | TCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCG > CP009273/3851127‑3851421 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |