| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,865,120 | C→A | 41.1% | intergenic (‑30/+90) | dgoT ← / ← dgoD | D‑galactonate transporter/galactonate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,865,120 | 0 | C | A | 41.1% | 383.3 / inf | 352 | intergenic (‑30/+90) | dgoT/dgoD | D‑galactonate transporter/galactonate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (102/105); new base A (70/75); total (172/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 356 total aligned reads displayed.
GGCGGAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCGGGG > CP009273/3864971‑3865268 | ggCGGAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGc < 2:2052252/150‑1 (MQ=255) gCGGAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCg < 1:2651967/150‑1 (MQ=255) cGGAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGa > 1:4384295/1‑150 (MQ=255) ggAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGaa > 2:1045305/1‑150 (MQ=255) ggAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTGGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGaa > 2:1144809/1‑150 (MQ=255) cACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCt < 1:51496/150‑1 (MQ=255) ggCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCAc < 1:2193489/150‑1 (MQ=255) gCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCAcc > 1:3804244/1‑150 (MQ=255) aGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATg < 2:3081735/150‑1 (MQ=255) aGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTGTCTCCAGATTTTGGGCATAGAGACGCCGCTCACCCTg > 2:3830232/1‑150 (MQ=255) ttGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGccc > 2:1974045/1‑150 (MQ=255) tGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCt < 1:3697974/150‑1 (MQ=255) tGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCt > 1:2406112/1‑150 (MQ=255) gcgcGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGt < 2:2105320/150‑1 (MQ=255) cgcgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTa < 1:4467347/150‑1 (MQ=255) cgcgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTa > 2:717540/1‑150 (MQ=255) cgGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAAt < 2:1707014/150‑1 (MQ=255) ggTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAAtt > 1:3473046/1‑150 (MQ=255) tCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTa < 1:2111212/150‑1 (MQ=255) gACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACa > 1:3781491/1‑150 (MQ=255) gACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACa < 2:4958385/150‑1 (MQ=255) aCATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACag < 1:837957/150‑1 (MQ=255) cATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACaga > 2:3870942/1‑150 (MQ=255) tAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAgg < 2:3052292/150‑1 (MQ=255) aaCAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAggg > 1:289100/1‑150 (MQ=255) aaCAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAggg > 2:3388801/1‑150 (MQ=255) aaCAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAggg > 2:4704455/1‑150 (MQ=255) aaaTGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTta < 1:2329930/150‑1 (MQ=255) aaTGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTtat > 2:4098622/1‑150 (MQ=255) tGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTatat > 2:1565144/1‑150 (MQ=255) aCTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATAttt > 2:2275277/1‑150 (MQ=255) cTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATAtttt < 1:1051099/150‑1 (MQ=255) tACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATAttttt < 2:3541079/150‑1 (MQ=255) ccGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGt < 1:381332/150‑1 (MQ=255) ccGGAATAAAGATCAACACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAATCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGt > 2:4656639/1‑150 (MQ=255) cGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTa < 2:4396808/150‑1 (MQ=255) cGTAATAAAGATCATCACCAGAGTCAGATAACGACGACGCCCCTGCTTTGCTGCATTAAAGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTa > 1:1875452/1‑150 (MQ=255) gTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTAt > 1:66598/1‑150 (MQ=255) ataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGc > 2:2674699/1‑150 (MQ=255) ataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGc > 2:2810784/1‑150 (MQ=255) ataaAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGc > 1:1346200/1‑150 (MQ=255) aGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCGTTCTCCAGATTCTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGtt < 2:2638303/150‑1 (MQ=255) tcatcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTa < 1:1831981/150‑1 (MQ=255) atcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGt > 1:5035947/1‑150 (MQ=255) atcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGt < 2:4144853/150‑1 (MQ=255) tcaCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATCGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCCTGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTg > 2:4846645/1‑150 (MQ=255) caCCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGc > 1:2795543/1‑150 (MQ=255) ccAGCGTCAGATACCGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGccc < 2:3281695/150‑1 (MQ=255) cAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCg > 2:4900952/1‑150 (MQ=255) gCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGAt < 1:4834578/150‑1 (MQ=255) gTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGa > 2:851999/1‑150 (MQ=255) tCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAg > 2:1827126/1‑150 (MQ=255) cAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAgg > 2:1553379/1‑150 (MQ=255) aGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAggg < 2:3207276/150‑1 (MQ=255) gATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAgggg > 2:761665/1‑150 (MQ=255) aaCGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCtt > 2:3101600/1‑150 (MQ=255) cGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTAc < 2:2873220/150‑1 (MQ=255) ccGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGt < 1:4706948/150‑1 (MQ=255) cGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTg < 1:1213773/150‑1 (MQ=255) gACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTgg > 2:435782/1‑150 (MQ=255) aCGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGc < 1:4323586/150‑1 (MQ=255) cGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCa > 2:2201707/1‑150 (MQ=255) gCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAg > 2:2697462/1‑150 (MQ=255) cccGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGa > 1:1008175/1‑150 (MQ=255) ggCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt > 2:238974/1‑150 (MQ=255) ggCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt < 2:558488/150‑1 (MQ=255) ggCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt < 1:4959567/150‑1 (MQ=255) ggCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAAtt > 1:2694052/1‑150 (MQ=255) tttGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTAcc > 2:3974148/1‑150 (MQ=255) gctgcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCAct > 2:198567/1‑150 (MQ=255) gcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTg > 1:1428904/1‑150 (MQ=255) gcATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTg > 1:3149741/1‑150 (MQ=255) cATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGc < 2:1411069/150‑1 (MQ=255) cATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGc < 1:1490562/150‑1 (MQ=255) tAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTAc < 2:3995137/150‑1 (MQ=255) aCGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGTGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGc < 1:3931732/150‑1 (MQ=255) gggAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTg > 1:3616497/1‑150 (MQ=255) atatCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTAt > 1:3520459/1‑150 (MQ=255) atatCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTAt < 1:4217991/150‑1 (MQ=255) atatCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTAt < 1:636566/150‑1 (MQ=255) aTAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCAt > 1:2762664/1‑150 (MQ=255) tAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATg > 1:3010865/1‑150 (MQ=255) tAGCGAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATg < 2:5080728/150‑1 (MQ=255) cGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACg < 1:812681/150‑1 (MQ=255) gAGCTTTCTCCGGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGAAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGc > 2:424329/1‑150 (MQ=255) gAGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGc > 1:2740862/1‑150 (MQ=255) aGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGcc < 1:3862571/150‑1 (MQ=255) aGCTTTCTCCAGATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGcc < 1:1252006/150‑1 (MQ=255) gCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCa < 2:4432950/150‑1 (MQ=255) ccAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGGGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGa < 2:241138/150‑1 (MQ=255) gATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTa < 1:570635/150‑1 (MQ=255) gATTTTGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTa < 2:4488992/150‑1 (MQ=255) ttGGGCATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGcc > 1:1773841/1‑150 (MQ=255) ggCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGt > 2:2495582/1‑150 (MQ=255) ggCAGAGCGACGCCGCTCACCATGCCCTGTAATTGACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCGTCATGACGCCAGAGCGGATTACGCCAGt < 1:3303662/150‑1 (MQ=255) cATAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTcc < 1:958117/150‑1 (MQ=255) aTAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCg > 1:4120350/1‑150 (MQ=255) aTAGAGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCg > 1:4609256/1‑150 (MQ=255) tAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCgg > 1:2001650/1‑150 (MQ=255) gCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCgggg < 1:1374900/150‑1 (MQ=255) | GGCGGAAGCCACGGCCAGGTTGGCGCGGTCGACATAACAAATGACTACCGTAATAAAGATCATCACCAGCGTCAGATAACGCCGACGCCCCGGCTTTGCTGCATTAACGGGAATATCCATAGCGAGCTTTCTCCAGATTTTGGGCATAGCGAAGCCGCTCACCATGCCCTGTAATTTACAGAGGGTTATATTTTTGTATTGCTGTTTTAGTGCCCGATGAGGGGCTTACGTGGCAGGAATTACCACTCTGCTACGCTGTTATCTTCATGACGCCAGAGCGGATTACGCCAGTCCGGGG > CP009273/3864971‑3865268 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |