| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,896,189 | G→T | 14.9% | T291T (ACC→ACA) | bglB ← | cryptic phospho‑beta‑glucosidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,896,189 | 0 | G | T | 14.9% | 879.7 / 93.8 | 274 | T291T (ACC→ACA) | bglB | cryptic phospho‑beta‑glucosidase B |
| Reads supporting (aligned to +/- strand): ref base G (113/120); new base T (27/14); total (140/134) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 278 total aligned reads displayed.
CCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896040‑3896338 | ccAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACg < 1:3372622/150‑1 (MQ=255) aCCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTa > 1:2365796/1‑150 (MQ=255) ccGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTAt > 2:4062543/1‑150 (MQ=255) ccGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTAt > 2:1520819/1‑150 (MQ=255) cAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTa > 2:273774/1‑150 (MQ=255) cAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTa > 1:3713384/1‑150 (MQ=255) cAATTGGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATTTTCATTATGTTGCCCTGCGCTTTTTTATTAATGATTTCGTCGTGGTAAACACAACCAGTCATGTAATAAATAAAAGAGATTAAATCGACTGTATGTTTTa < 1:4250315/150‑1 (MQ=255) attttGCCACCCCCACTGGGAACTTTTCAGATGCGGATTGGGGATCATATTCTGTATGTGGCCCTGCGATTTTTTATTAATGCTTTGGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa < 1:1235815/148‑1 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 1:2951691/1‑150 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 1:1216837/1‑150 (MQ=255) aaTTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTaa > 2:400519/1‑150 (MQ=255) gCCACCCCCACTCTGAACTTTTCAGATGCGGTTTGGGTATCATATTCATTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATTTAATAACTAAAACAGATGAAATCGACGGTATGTTTTAAAtctt < 2:266659/150‑1 (MQ=255) gCCACCCCCACACTGAACTTTTCAGATGCGGATTGGGGATAATATTCAGTATTTTGCCCTGCGCATTTTTATTAATGATTTCGTCGTGGTAAACAAAACCAGTCATGTAATAACTAAAAGAGATCAACTCGACGGTATGTTTTAAAtctt < 1:5146129/150‑1 (MQ=255) ccACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttc > 1:2075862/1‑150 (MQ=255) cACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAAtcttct < 2:3435851/150‑1 (MQ=255) ccACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTc > 2:4089793/1‑150 (MQ=255) ctctTAACTTTTCTGATGCGTATTGGGGATCATTTTCAGTATGTGGCCCTGCGAATTTTTTTTAATGCTTTCGTCGTGGGAAACACAACCAGTCATTTAATAACTAAAAGAGATTAACTCGACTGTATGTTTTAAATCTTCTGCGTCACt < 1:4558659/150‑1 (MQ=255) tctGAACATTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACtt > 2:3358735/1‑150 (MQ=255) ctcaaCTTTTCTGTTGGGGTTTGGGTATAATATTAATTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGTGAAACAAAACCAGTCATGTAATAAATAAAAGATATCAAATCGACGGTATGTTTTAAATCTTCTGCGTCACttt < 1:2741323/147‑1 (MQ=255) ctGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACttt > 1:2725368/1‑150 (MQ=255) tGAACTTTTCAGATGCGGAGTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTc > 1:82344/1‑150 (MQ=255) cTTTTCTGAGGCGTATTGGGTATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCCGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTc < 2:2333066/150‑1 (MQ=255) ttttCAGATGCGGATTGGGGATCATTTTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCCGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCa < 2:320094/150‑1 (MQ=255) ttttCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCa > 2:3274499/1‑150 (MQ=255) ttCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCAtc > 1:2237868/1‑150 (MQ=255) aGATGCGTTTTGGGTATAATATTCTGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCAGTCATGTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCa < 1:399991/150‑1 (MQ=255) gATGCGGATTGGGGAACATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCTTCGTGGGAAACACAACCCGTCATGTAATAACTAAAACACATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCaa < 2:4286021/150‑1 (MQ=255) cgtttggggtATCATATTCTGTATGTTGCCCGGCGCATTTTTATTAAGGCTTTGGCGGTGGTAAACACAACCAGTCATTTAATAAATAAAACAGATCAACTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGt < 1:4341613/144‑1 (MQ=255) ggATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg > 1:2337185/1‑150 (MQ=255) ggATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTg > 1:1340071/1‑150 (MQ=255) gATTGGGGATCATATTCTGTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTGGTGGGAAACACAACCAGTCATGTAATAACTAAAAGATATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGa < 1:3652692/150‑1 (MQ=255) tttGGGTATAATATTCTGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat < 1:3062160/149‑1 (MQ=255) tttGGGGATCATATTCCGTATGTTGCCCGGCGCATTTTTATTAATGCTTTCGTCGTGGTAAACACAACCAGTCTTGTAATAACAAAAATAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat < 1:3542641/149‑1 (MQ=255) aTTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat > 2:92849/1‑150 (MQ=255) aTTGGGGAAAATATTCTGTATGTTGCCCTGCGAATTTTTATTAATGCTTTCGTCGTGGTAAACAAAACCAGTCATGTAATAACTAAAAGACATCAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGat < 1:2808650/150‑1 (MQ=255) ttGGGTATCATATTCAGTATGTTGCCCTGCGAATTTTTATTAATGATTTCGTCGTGGGAAACACAACCAGTCATGTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGata < 1:374234/150‑1 (MQ=255) ggggATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGatagt > 2:4707400/1‑148 (MQ=255) ggggATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATAtt > 1:1371092/1‑150 (MQ=255) gggATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATtg > 2:2140720/1‑150 (MQ=255) aTCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTgg > 2:4786910/1‑150 (MQ=255) cAGTTTGTTGCCCTGCGCATTTTTATAAATGCTTTCGTCGTGGTAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaa < 1:1459042/150‑1 (MQ=255) aGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaag > 1:3241582/1‑150 (MQ=255) gTATGTTGCCCTGCGCTTTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaaga < 1:4133165/150‑1 (MQ=255) tagtttGCCCGGCGCATTTTTATTAAGGATTTCGTCGTGGGAAACACAACCAGTCATTTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGgaagaa < 2:1030617/146‑1 (MQ=255) tGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAAc > 2:545643/1‑150 (MQ=255) gCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTg < 2:390803/150‑1 (MQ=255) cccTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGc > 2:1960187/1‑150 (MQ=255) tGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCata > 2:2951432/1‑150 (MQ=255) cATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGc > 2:412733/1‑150 (MQ=255) cATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGc > 2:2263931/1‑150 (MQ=255) cATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGc > 1:646045/1‑150 (MQ=255) ttttATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCgg > 2:4984136/1‑150 (MQ=255) tttATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCggg > 1:4797385/1‑150 (MQ=255) aaTGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTg > 2:721577/1‑150 (MQ=255) gCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGcc > 1:3495731/1‑150 (MQ=255) tttGGTGGTGGGAAACACAACCTGTCTTGTAATAACTAAATGTGTTGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAc < 2:3118331/150‑1 (MQ=255) tttCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAc < 2:48349/150‑1 (MQ=255) tcgtcgTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCAcgc < 1:1992495/150‑1 (MQ=255) gtcgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACgcgc > 1:4953291/1‑150 (MQ=255) gtcgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACgcgc > 1:1094982/1‑150 (MQ=255) gtcgtGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACgcgc > 2:4921283/1‑150 (MQ=255) tcgtGGTAAACACAACCAGTCTTTAAATAAATAAAAGAGATTAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGcc < 1:437364/150‑1 (MQ=255) tgtGGGAAACACACCACGTCTTTTAATAACTAAAAGAGTTGATATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAATAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt < 2:3548434/149‑1 (MQ=255) cgtGGGAAACACAACCAGTCATGTAATAACTAAATGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCt < 2:2996650/150‑1 (MQ=255) ttGGTAAACACAACCCGTCATTTAATAACTAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTg < 2:983606/149‑1 (MQ=255) tGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGa > 2:3781906/1‑150 (MQ=255) ggAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAAc > 2:4612975/1‑150 (MQ=255) acaACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCAcc < 2:1130903/150‑1 (MQ=255) aaCCAGTCATGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaa > 2:3841929/1‑150 (MQ=255) aaCCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCaa > 1:1162993/1‑150 (MQ=255) ccAGTCTTGTAATAACTAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAg < 1:1563969/150‑1 (MQ=255) ccAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAg < 1:2099725/150‑1 (MQ=255) aGTCTTGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGaa < 2:4218193/150‑1 (MQ=255) tCATGTAATAAATAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACa < 2:469685/150‑1 (MQ=255) aTGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATc > 1:4030877/1‑150 (MQ=255) tttaataaCTAAAAGTGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATcc < 1:1848196/148‑1 (MQ=255) tGTAATAACTAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATcc > 1:3899672/1‑150 (MQ=255) tGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATcc > 2:1911708/1‑150 (MQ=255) atAAAAGAGATGAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCgg < 1:4489337/149‑1 (MQ=255) tAAAAGAGATGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGt > 1:1012475/1‑150 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 1:503658/1‑150 (MQ=255) aaaaGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGtt > 1:963956/1‑150 (MQ=255) agagATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTtctc > 2:5117288/1‑150 (MQ=255) gagaTTAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTctct < 2:4485677/150‑1 (MQ=255) gagaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTctct > 1:719724/1‑150 (MQ=255) agaTGAAATCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCtt > 1:2490713/1‑150 (MQ=255) gaTTAACTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTc < 1:3082364/150‑1 (MQ=255) gaTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTc < 2:2431741/150‑1 (MQ=255) aTGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTcc < 1:3120501/150‑1 (MQ=255) tGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCa > 1:4841873/1‑150 (MQ=255) gAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCAt > 2:2791217/1‑150 (MQ=255) gAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCAt < 1:1160366/150‑1 (MQ=255) aaTCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATgg < 1:338559/150‑1 (MQ=255) aTCGACTGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGc > 1:2684319/1‑150 (MQ=255) cGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCt < 1:161742/150‑1 (MQ=255) gACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTg > 1:2373944/1‑150 (MQ=255) gACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTg > 1:2047901/1‑150 (MQ=255) gACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTg > 2:1625871/1‑150 (MQ=255) cGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCa > 2:21136/1‑150 (MQ=255) ggTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCaa > 1:4141897/1‑150 (MQ=255) | CCAACCGGATCAATTTGCCACCCCCACTCTGAACTTTTCAGATGCGGATTGGGGATCATATTCAGTATGTTGCCCTGCGCATTTTTATTAATGCTTTCGTCGTGGGAAACACAACCAGTCATGTAATAACTAAAAGAGATGAAATCGACGGTATGTTTTAAATCTTCTGCGTCACTTTCAGTCATCTCAATGGTGATATTGTGGTCGCGGAAGAAACGCTGCATATAGCCGGGATACTGGCCACGCGCCTGAACATCACCAAAGAACATCCAGCGCCGGTTCTCTTCCATGGCCTGCAA > CP009273/3896040‑3896338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |